RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 HIST2H2BEQ16778 126 aa8.06□□□□□ -1.12
DDX55-213ENST00000545042 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.06□□□□□ -1.12
DDX55-213ENST00000545042 HIST1H2BHQ93079 126 aa8.06□□□□□ -1.12
DDX55-213ENST00000545042 HIST1H2BNQ99877 126 aa8.06□□□□□ -1.12
DDX55-213ENST00000545042 HIST1H2BMQ99879 126 aa8.06□□□□□ -1.12
DDX55-213ENST00000545042 MYMXA0A1B0GTQ4 84 aa8.05□□□□□ -1.12
DDX55-213ENST00000545042 LINC00587B1AMM8 73 aa8.05□□□□□ -1.12
DDX55-213ENST00000545042 ZNF861PO60384 105 aa8.05□□□□□ -1.12
DDX55-213ENST00000545042 BCE1O60756 84 aa8.05□□□□□ -1.12
DDX55-213ENST00000545042 MEIG1Q5JSS6 88 aa8.05□□□□□ -1.12
DDX55-213ENST00000545042 NDUFA12Q9UI09 145 aa8.05□□□□□ -1.12
DDX55-213ENST00000545042 A0A0U1RRA0 63 aa8.04□□□□□ -1.12
DDX55-213ENST00000545042 LEPROTO15243 131 aa8.04□□□□□ -1.12
DDX55-213ENST00000545042 IGKCP01834 107 aa8.04□□□□□ -1.12
DDX55-213ENST00000545042 RPL28P46779 137 aaKnown RBP8.04□□□□□ -1.12
DDX55-213ENST00000545042 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
DDX55-213ENST00000545042 PLEKHB2Q96CS7 222 aa8.04□□□□□ -1.12
DDX55-213ENST00000545042 VPREB1P12018 145 aa8.03□□□□□ -1.12
DDX55-213ENST00000545042 TNXBP22105 4242 aa8.03□□□□□ -1.12
DDX55-213ENST00000545042 SMIM13P0DJ93 91 aa8.02□□□□□ -1.13
DDX55-213ENST00000545042 PMCHL2Q9BQD1 86 aa8.02□□□□□ -1.13
DDX55-213ENST00000545042 IGKV2-28A0A075B6P5 120 aa8.01□□□□□ -1.13
DDX55-213ENST00000545042 IGKV2D-28P01615 120 aa8.01□□□□□ -1.13
DDX55-213ENST00000545042 UBE2AP49459 152 aa8.01□□□□□ -1.13
DDX55-213ENST00000545042 IGLV1-50A0A075B6I6 118 aa8□□□□□ -1.13
DDX55-213ENST00000545042 J3QQQ9 107 aa8□□□□□ -1.13
DDX55-213ENST00000545042 LGALS3P17931 250 aaKnown RBP8□□□□□ -1.13
DDX55-213ENST00000545042 NMUP48645 174 aa8□□□□□ -1.13
DDX55-213ENST00000545042 MIR7-3HGQ8N6C7 128 aa8□□□□□ -1.13
DDX55-213ENST00000545042 SYS1-DBNDD2H3BUS1 97 aa7.99□□□□□ -1.13
DDX55-213ENST00000545042 PRR26Q8N8Z3 221 aa7.99□□□□□ -1.13
DDX55-213ENST00000545042 TSPEAR-AS2P59090 65 aa7.98□□□□□ -1.13
DDX55-213ENST00000545042 BOD1L2Q8IYS8 172 aa7.98□□□□□ -1.13
DDX55-213ENST00000545042 M0R378 163 aa7.97□□□□□ -1.13
DDX55-213ENST00000545042 KRTAP1-4P0C5Y4 121 aa7.97□□□□□ -1.13
DDX55-213ENST00000545042 RPL13AP40429 203 aaKnown RBP7.97□□□□□ -1.13
DDX55-213ENST00000545042 PET117Q6UWS5 81 aa7.97□□□□□ -1.13
DDX55-213ENST00000545042 Q8NDZ9 215 aa7.97□□□□□ -1.13
DDX55-213ENST00000545042 HMCN2Q8NDA2 5059 aa7.96□□□□□ -1.13
DDX55-213ENST00000545042 COA6Q5JTJ3 125 aaKnown RBP7.96□□□□□ -1.14
DDX55-213ENST00000545042 TMEM126AQ9H061 195 aa7.96□□□□□ -1.14
DDX55-213ENST00000545042 TMEM238C9JI98 176 aa7.95□□□□□ -1.14
DDX55-213ENST00000545042 E9PLD3 99 aa7.95□□□□□ -1.14
DDX55-213ENST00000545042 S100A1P23297 94 aa7.95□□□□□ -1.14
DDX55-213ENST00000545042 LINC01545Q5VT33 79 aa7.95□□□□□ -1.14
DDX55-213ENST00000545042 FAM19A1Q7Z5A9 133 aa7.95□□□□□ -1.14
DDX55-213ENST00000545042 MIEN1Q9BRT3 115 aa7.95□□□□□ -1.14
DDX55-213ENST00000545042 IGKV2D-26A0A0A0MRZ7 120 aa7.94□□□□□ -1.14
DDX55-213ENST00000545042 KRTAP13-1Q8IUC0 172 aa7.94□□□□□ -1.14
DDX55-213ENST00000545042 NCR3O14931 201 aa7.93□□□□□ -1.14
DDX55-213ENST00000545042 KRTDAPP60985 99 aa7.93□□□□□ -1.14
DDX55-213ENST00000545042 S100A12P80511 92 aa7.93□□□□□ -1.14
DDX55-213ENST00000545042 PRLHP81277 87 aa7.93□□□□□ -1.14
DDX55-213ENST00000545042 DAND5Q8N907 189 aa7.93□□□□□ -1.14
DDX55-213ENST00000545042 C20orf202A1L168 122 aa7.92□□□□□ -1.14
DDX55-213ENST00000545042 C3orf79P0CE67 100 aa7.92□□□□□ -1.14
DDX55-213ENST00000545042 LOC107984156A0A0G2JMH3 177 aa7.91□□□□□ -1.14
DDX55-213ENST00000545042 PRYO14603 147 aa7.91□□□□□ -1.14
DDX55-213ENST00000545042 CRYGAP11844 174 aa7.91□□□□□ -1.14
DDX55-213ENST00000545042 ARL17AQ8IVW1 177 aa7.91□□□□□ -1.14
DDX55-213ENST00000545042 A0A0J9YXY3 114 aa7.9□□□□□ -1.14
DDX55-213ENST00000545042 TRBV10-2A0A0K0K1G8 114 aa7.89□□□□□ -1.15
DDX55-213ENST00000545042 TRBV10-3A0A0K0K1G6 114 aa7.88□□□□□ -1.15
DDX55-213ENST00000545042 AKR1D1P51857 326 aa7.88□□□□□ -1.15
DDX55-213ENST00000545042 HIGD2AQ9BW72 106 aa7.88□□□□□ -1.15
DDX55-213ENST00000545042 KCNQ1DNQ9H478 68 aa7.88□□□□□ -1.15
DDX55-213ENST00000545042 SPANXB1Q9NS25 103 aaPredicted RBP7.88□□□□□ -1.15
DDX55-213ENST00000545042 ETDCA0A1B0GVM5 59 aa7.87□□□□□ -1.15
DDX55-213ENST00000545042 ZNF815PA8K554 130 aa7.87□□□□□ -1.15
DDX55-213ENST00000545042 NDUFC2O95298 119 aa7.87□□□□□ -1.15
DDX55-213ENST00000545042 DDTP30046 118 aa7.87□□□□□ -1.15
DDX55-213ENST00000545042 FAM229BQ4G0N7 80 aa7.87□□□□□ -1.15
DDX55-213ENST00000545042 LINC00337Q8N6G1 96 aa7.87□□□□□ -1.15
DDX55-213ENST00000545042 TYMSOSQ8TAI1 123 aa7.87□□□□□ -1.15
DDX55-213ENST00000545042 UBR4Q5T4S7 5183 aa7.87□□□□□ -1.15
DDX55-213ENST00000545042 A0A087X002 238 aa7.86□□□□□ -1.15
DDX55-213ENST00000545042 TIMM17BO60830 172 aa7.86□□□□□ -1.15
DDX55-213ENST00000545042 NPC2P61916 151 aa7.86□□□□□ -1.15
DDX55-213ENST00000545042 S100A7L2Q5SY68 101 aa7.86□□□□□ -1.15
DDX55-213ENST00000545042 ADAMTSL4-AS1Q5T5F5 129 aa7.86□□□□□ -1.15
DDX55-213ENST00000545042 ANAPC11Q9NYG5 84 aa7.86□□□□□ -1.15
DDX55-213ENST00000545042 S100A2P29034 98 aa7.85□□□□□ -1.15
DDX55-213ENST00000545042 SPRR1AP35321 89 aa7.85□□□□□ -1.15
DDX55-213ENST00000545042 ZNF706Q9Y5V0 76 aaPredicted RBP7.85□□□□□ -1.15
DDX55-213ENST00000545042 S100A6P06703 90 aa7.83□□□□□ -1.16
DDX55-213ENST00000545042 SOSTDC1Q6X4U4 206 aa7.83□□□□□ -1.16
DDX55-213ENST00000545042 CBY1Q9Y3M2 126 aa7.83□□□□□ -1.16
DDX55-213ENST00000545042 SCGB1D4Q6XE38 83 aa7.82□□□□□ -1.16
DDX55-213ENST00000545042 LINC00308Q8TCZ7 52 aa7.82□□□□□ -1.16
DDX55-213ENST00000545042 LITAFQ99732 161 aa7.82□□□□□ -1.16
DDX55-213ENST00000545042 KRTAP4-16G5E9R7 235 aaPredicted RBP7.81□□□□□ -1.16
DDX55-213ENST00000545042 IGLV6-57P01721 117 aa7.81□□□□□ -1.16
DDX55-213ENST00000545042 ATOH7Q8N100 152 aa7.81□□□□□ -1.16
DDX55-213ENST00000545042 HIST3H2BBQ8N257 126 aa7.81□□□□□ -1.16
DDX55-213ENST00000545042 TTTY13Q9BZ97 58 aa7.81□□□□□ -1.16
DDX55-213ENST00000545042 SPANXCQ9NY87 97 aa7.81□□□□□ -1.16
DDX55-213ENST00000545042 TRAV23DV6A0A075B6W5 121 aa7.8□□□□□ -1.16
DDX55-213ENST00000545042 EIF4EBP3O60516 100 aaPredicted RBP7.8□□□□□ -1.16
DDX55-213ENST00000545042 SNRPEP62304 92 aaKnown RBP7.8□□□□□ -1.16
DDX55-213ENST00000545042 KRTAP13-2Q52LG2 175 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms