RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 APOC4P55056 127 aa11.3□□□□□ -0.6
KDM2B-216ENST00000543025 SMIM20Q8N5G0 67 aa11.3□□□□□ -0.6
KDM2B-216ENST00000543025 ANK2Q01484 3957 aa11.3□□□□□ -0.6
KDM2B-216ENST00000543025 NBEAL2Q6ZNJ1 2754 aa11.28□□□□□ -0.6
KDM2B-216ENST00000543025 C6orf99Q4VX62 202 aa11.28□□□□□ -0.6
KDM2B-216ENST00000543025 RPL18AQ02543 176 aaKnown RBP11.28□□□□□ -0.6
KDM2B-216ENST00000543025 S100A7L2Q5SY68 101 aa11.28□□□□□ -0.6
KDM2B-216ENST00000543025 Q8NDZ9 215 aa11.27□□□□□ -0.61
KDM2B-216ENST00000543025 MUC7Q8TAX7 377 aa11.27□□□□□ -0.61
KDM2B-216ENST00000543025 C2orf48Q96LS8 159 aa11.27□□□□□ -0.61
KDM2B-216ENST00000543025 CELA1Q9UNI1 258 aa11.27□□□□□ -0.61
KDM2B-216ENST00000543025 SPAG11BQ08648 103 aa11.26□□□□□ -0.61
KDM2B-216ENST00000543025 MIFP14174 115 aa11.25□□□□□ -0.61
KDM2B-216ENST00000543025 LELP1Q5T871 98 aa11.25□□□□□ -0.61
KDM2B-216ENST00000543025 Q8NAQ8 132 aa11.25□□□□□ -0.61
KDM2B-216ENST00000543025 WFDC9Q8NEX5 89 aa11.25□□□□□ -0.61
KDM2B-216ENST00000543025 C10orf25Q5T742 122 aa11.24□□□□□ -0.61
KDM2B-216ENST00000543025 UNQ6190/PRO20217Q6UXQ8 127 aa11.24□□□□□ -0.61
KDM2B-216ENST00000543025 C6orf223Q8N319 242 aa11.24□□□□□ -0.61
KDM2B-216ENST00000543025 A0A087WVE0 104 aa11.24□□□□□ -0.61
KDM2B-216ENST00000543025 LINC00575Q6W349 94 aa11.24□□□□□ -0.61
KDM2B-216ENST00000543025 CMYA5Q8N3K9 4069 aa11.23□□□□□ -0.61
KDM2B-216ENST00000543025 A0A0J9YWU9 116 aa11.23□□□□□ -0.61
KDM2B-216ENST00000543025 IGHV4-30-4P0DP06 118 aa11.23□□□□□ -0.61
KDM2B-216ENST00000543025 SPART-AS1P0CW21 52 aa11.23□□□□□ -0.61
KDM2B-216ENST00000543025 CRYGAP11844 174 aa11.23□□□□□ -0.61
KDM2B-216ENST00000543025 HTN3P15516 51 aa11.22□□□□□ -0.61
KDM2B-216ENST00000543025 PRR34Q9NV39 138 aa11.22□□□□□ -0.61
KDM2B-216ENST00000543025 hADV29S1A0JD25 119 aa11.2□□□□□ -0.62
KDM2B-216ENST00000543025 ATP5EP2Q5VTU8 51 aa11.2□□□□□ -0.62
KDM2B-216ENST00000543025 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
KDM2B-216ENST00000543025 USP17L23D6RBM5 183 aa11.19□□□□□ -0.62
KDM2B-216ENST00000543025 IGLV6-57P01721 117 aa11.19□□□□□ -0.62
KDM2B-216ENST00000543025 SERP2Q8N6R1 65 aa11.18□□□□□ -0.62
KDM2B-216ENST00000543025 PKD1L1Q8TDX9 2849 aa11.17□□□□□ -0.62
KDM2B-216ENST00000543025 GVQW2A0A096LPI5 108 aaPredicted RBP11.17□□□□□ -0.62
KDM2B-216ENST00000543025 ZNF561-AS1K7EIQ3 104 aa11.17□□□□□ -0.62
KDM2B-216ENST00000543025 WIPF1O43516 503 aa11.17□□□□□ -0.62
KDM2B-216ENST00000543025 RBM3P98179 157 aaKnown RBP11.17□□□□□ -0.62
KDM2B-216ENST00000543025 ENHOQ6UWT2 76 aa11.17□□□□□ -0.62
KDM2B-216ENST00000543025 UBL5Q9BZL1 73 aa11.17□□□□□ -0.62
KDM2B-216ENST00000543025 KRTAP21-3Q3LHN1 58 aa11.16□□□□□ -0.62
KDM2B-216ENST00000543025 LYPD5Q6UWN5 251 aa11.16□□□□□ -0.62
KDM2B-216ENST00000543025 OXLD1Q5BKU9 147 aa11.16□□□□□ -0.62
KDM2B-216ENST00000543025 Q6ZQT0 140 aa11.14□□□□□ -0.63
KDM2B-216ENST00000543025 LAMTOR3Q9UHA4 124 aa11.14□□□□□ -0.63
KDM2B-216ENST00000543025 LOC110117498A0A087WWA1 95 aa11.13□□□□□ -0.63
KDM2B-216ENST00000543025 C6orf48Q9UBA6 75 aa11.13□□□□□ -0.63
KDM2B-216ENST00000543025 TRBV10-3A0A0K0K1G6 114 aa11.13□□□□□ -0.63
KDM2B-216ENST00000543025 TRAV23DV6A0A075B6W5 121 aa11.12□□□□□ -0.63
KDM2B-216ENST00000543025 Q6ZQY7 126 aa11.12□□□□□ -0.63
KDM2B-216ENST00000543025 H3BQ85 93 aa11.11□□□□□ -0.63
KDM2B-216ENST00000543025 DIRC1Q969H9 104 aa11.11□□□□□ -0.63
KDM2B-216ENST00000543025 UPK3BQ9BT76 320 aa11.11□□□□□ -0.63
KDM2B-216ENST00000543025 XAGE1AQ9HD64 81 aa11.1□□□□□ -0.63
KDM2B-216ENST00000543025 CYSTM1Q9H1C7 97 aa11.1□□□□□ -0.63
KDM2B-216ENST00000543025 FAM19A1Q7Z5A9 133 aa11.09□□□□□ -0.63
KDM2B-216ENST00000543025 DSCR8Q96T75 97 aa11.09□□□□□ -0.63
KDM2B-216ENST00000543025 KRTAP10-11P60412 298 aa11.09□□□□□ -0.63
KDM2B-216ENST00000543025 EGFEM1PQ0D2K5 195 aa11.09□□□□□ -0.63
KDM2B-216ENST00000543025 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
KDM2B-216ENST00000543025 GHRHP01286 108 aa11.07□□□□□ -0.64
KDM2B-216ENST00000543025 ZNF73O43830 326 aaPredicted RBP11.07□□□□□ -0.64
KDM2B-216ENST00000543025 PDE6GP18545 87 aa11.07□□□□□ -0.64
KDM2B-216ENST00000543025 TMEM258P61165 79 aa11.06□□□□□ -0.64
KDM2B-216ENST00000543025 CAMK2N2Q96S95 79 aa11.06□□□□□ -0.64
KDM2B-216ENST00000543025 WFDC10BQ8IUB3 73 aa11.05□□□□□ -0.64
KDM2B-216ENST00000543025 DNAH3Q8TD57 4116 aa11.05□□□□□ -0.64
KDM2B-216ENST00000543025 J3KT08 172 aa11.05□□□□□ -0.64
KDM2B-216ENST00000543025 M0R2N4 97 aa11.05□□□□□ -0.64
KDM2B-216ENST00000543025 COX7BP24311 80 aa11.05□□□□□ -0.64
KDM2B-216ENST00000543025 HIGD2BQ4VC39 106 aa11.05□□□□□ -0.64
KDM2B-216ENST00000543025 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.05□□□□□ -0.64
KDM2B-216ENST00000543025 ELOF1P60002 83 aaKnown RBP11.04□□□□□ -0.64
KDM2B-216ENST00000543025 H3BNG1 76 aa11.04□□□□□ -0.64
KDM2B-216ENST00000543025 TRBV7-6A0A0J9YX20 115 aa11.03□□□□□ -0.64
KDM2B-216ENST00000543025 VPREB1P12018 145 aa11.03□□□□□ -0.64
KDM2B-216ENST00000543025 KPRPQ5T749 579 aaPredicted RBP11.03□□□□□ -0.64
KDM2B-216ENST00000543025 Q6ZVQ6 151 aa11.03□□□□□ -0.64
KDM2B-216ENST00000543025 LOC107984640A0A0U1RRK4 108 aa11.02□□□□□ -0.64
KDM2B-216ENST00000543025 LINC01547P58512 204 aaPredicted RBP11.02□□□□□ -0.64
KDM2B-216ENST00000543025 KRTAP26-1Q6PEX3 210 aa11.01□□□□□ -0.65
KDM2B-216ENST00000543025 RPS28P62857 69 aaKnown RBP11.01□□□□□ -0.65
KDM2B-216ENST00000543025 HAMPP81172 84 aa11□□□□□ -0.65
KDM2B-216ENST00000543025 Q6ZRU5 148 aa11□□□□□ -0.65
KDM2B-216ENST00000543025 M0R378 163 aa11□□□□□ -0.65
KDM2B-216ENST00000543025 MGAM2Q2M2H8 2515 aa11□□□□□ -0.65
KDM2B-216ENST00000543025 TRBV7-4A0A0J9YYF1 115 aa10.99□□□□□ -0.65
KDM2B-216ENST00000543025 C15orf56Q8N910 161 aa10.99□□□□□ -0.65
KDM2B-216ENST00000543025 NDUFC2-KCTD14E9PQ53 114 aa10.98□□□□□ -0.65
KDM2B-216ENST00000543025 NOTCH1P46531 2555 aa10.98□□□□□ -0.65
KDM2B-216ENST00000543025 CXCL6P80162 114 aa10.98□□□□□ -0.65
KDM2B-216ENST00000543025 PRB2P02812 416 aaPredicted RBP10.97□□□□□ -0.65
KDM2B-216ENST00000543025 Q6ZTC4 211 aa10.97□□□□□ -0.65
KDM2B-216ENST00000543025 NBEAL1Q6ZS30 2694 aa10.97□□□□□ -0.65
KDM2B-216ENST00000543025 BCE1O60756 84 aa10.97□□□□□ -0.65
KDM2B-216ENST00000543025 RETNQ9HD89 108 aa10.97□□□□□ -0.65
KDM2B-216ENST00000543025 DPH3Q96FX2 82 aa10.96□□□□□ -0.66
KDM2B-216ENST00000543025 LINC00528Q8N1L1 170 aa10.95□□□□□ -0.66
KDM2B-216ENST00000543025 C1orf43Q9BWL3 253 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms