RNA–Protein interactions for RNA: ENST00000543002.5

RABGGTA-203, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 1,329 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-203ENST00000543002 C22orf24Q9Y442 160 aa10.65□□□□□ -0.7
RABGGTA-203ENST00000543002 TMA7Q9Y2S6 64 aaKnown RBP10.64□□□□□ -0.71
RABGGTA-203ENST00000543002 IGLV5-37A0A075B6J1 123 aa10.63□□□□□ -0.71
RABGGTA-203ENST00000543002 A0A0J9YXY3 114 aa10.63□□□□□ -0.71
RABGGTA-203ENST00000543002 MIR7-3HGQ8N6C7 128 aa10.63□□□□□ -0.71
RABGGTA-203ENST00000543002 TP73-AS1Q9UF72 201 aa10.63□□□□□ -0.71
RABGGTA-203ENST00000543002 VPS13BQ7Z7G8 4022 aa10.63□□□□□ -0.71
RABGGTA-203ENST00000543002 ZNF815PA8K554 130 aa10.61□□□□□ -0.71
RABGGTA-203ENST00000543002 SCGB1D1O95968 90 aa10.61□□□□□ -0.71
RABGGTA-203ENST00000543002 PRR3P79522 188 aaKnown RBP10.61□□□□□ -0.71
RABGGTA-203ENST00000543002 LBHQ53QV2 105 aaPredicted RBP10.61□□□□□ -0.71
RABGGTA-203ENST00000543002 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
RABGGTA-203ENST00000543002 INAFM2P0DMQ5 153 aa10.6□□□□□ -0.71
RABGGTA-203ENST00000543002 VPREB1P12018 145 aa10.6□□□□□ -0.71
RABGGTA-203ENST00000543002 RPL24P83731 157 aaKnown RBP10.6□□□□□ -0.71
RABGGTA-203ENST00000543002 MRPL55Q7Z7F7 128 aaKnown RBP10.6□□□□□ -0.71
RABGGTA-203ENST00000543002 UBE2BP63146 152 aa10.59□□□□□ -0.71
RABGGTA-203ENST00000543002 KRTAP11-1Q8IUC1 163 aa10.59□□□□□ -0.71
RABGGTA-203ENST00000543002 NKAPP1Q8N9T2 125 aa10.59□□□□□ -0.71
RABGGTA-203ENST00000543002 PSORS1C2Q9UIG4 136 aa10.59□□□□□ -0.71
RABGGTA-203ENST00000543002 HSBP1L1C9JCN9 74 aa10.58□□□□□ -0.71
RABGGTA-203ENST00000543002 DAND5Q8N907 189 aa10.58□□□□□ -0.71
RABGGTA-203ENST00000543002 TIMM17BO60830 172 aa10.58□□□□□ -0.72
RABGGTA-203ENST00000543002 Q8NDZ9 215 aa10.58□□□□□ -0.72
RABGGTA-203ENST00000543002 LINC00167Q96N53 147 aa10.58□□□□□ -0.72
RABGGTA-203ENST00000543002 LOC107984156A0A0G2JMH3 177 aa10.57□□□□□ -0.72
RABGGTA-203ENST00000543002 ADAMTSL4-AS1Q5T5F5 129 aa10.57□□□□□ -0.72
RABGGTA-203ENST00000543002 ARL17AQ8IVW1 177 aa10.57□□□□□ -0.72
RABGGTA-203ENST00000543002 BOD1L2Q8IYS8 172 aa10.57□□□□□ -0.72
RABGGTA-203ENST00000543002 HNRNPA3P51991 378 aaKnown RBP10.56□□□□□ -0.72
RABGGTA-203ENST00000543002 PCP2Q8IVA1 136 aa10.56□□□□□ -0.72
RABGGTA-203ENST00000543002 LITAFQ99732 161 aa10.56□□□□□ -0.72
RABGGTA-203ENST00000543002 ABCA13Q86UQ4 5058 aa10.55□□□□□ -0.72
RABGGTA-203ENST00000543002 GAGE10A6NGK3 116 aa10.55□□□□□ -0.72
RABGGTA-203ENST00000543002 JOSD1Q15040 202 aaPredicted RBP10.55□□□□□ -0.72
RABGGTA-203ENST00000543002 C1orf137Q5JT78 98 aa10.55□□□□□ -0.72
RABGGTA-203ENST00000543002 SCGB1D4Q6XE38 83 aa10.54□□□□□ -0.72
RABGGTA-203ENST00000543002 MIEN1Q9BRT3 115 aa10.54□□□□□ -0.72
RABGGTA-203ENST00000543002 RPL37AP8A6NKH3 93 aa10.53□□□□□ -0.72
RABGGTA-203ENST00000543002 M0R378 163 aa10.52□□□□□ -0.73
RABGGTA-203ENST00000543002 SOSTDC1Q6X4U4 206 aa10.51□□□□□ -0.73
RABGGTA-203ENST00000543002 IGLV1-50A0A075B6I6 118 aa10.5□□□□□ -0.73
RABGGTA-203ENST00000543002 TMEM238C9JI98 176 aa10.5□□□□□ -0.73
RABGGTA-203ENST00000543002 EIF4EBP3O60516 100 aaPredicted RBP10.5□□□□□ -0.73
RABGGTA-203ENST00000543002 NPC2P61916 151 aa10.5□□□□□ -0.73
RABGGTA-203ENST00000543002 SRSF9Q13242 221 aaKnown RBP eCLIP10.5□□□□□ -0.73
RABGGTA-203ENST00000543002 FLG2Q5D862 2391 aaPredicted RBP10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 PCLOQ9Y6V0 5065 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 IGKV2-28A0A075B6P5 120 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 NCR3O14931 201 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 NDUFC2O95298 119 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 IGKV2D-28P01615 120 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 IGLV7-43P04211 117 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 LINC00308Q8TCZ7 52 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 SPANXDQ9BXN6 97 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 SPANXCQ9NY87 97 aa10.49□□□□□ -0.73
RABGGTA-203ENST00000543002 SPINK6Q6UWN8 80 aa10.48□□□□□ -0.73
RABGGTA-203ENST00000543002 TRBV10-2A0A0K0K1G8 114 aa10.47□□□□□ -0.73
RABGGTA-203ENST00000543002 PYY3Q5JQD4 70 aa10.47□□□□□ -0.73
RABGGTA-203ENST00000543002 BCE1O60756 84 aa10.46□□□□□ -0.73
RABGGTA-203ENST00000543002 Q6ZVH6 145 aa10.46□□□□□ -0.73
RABGGTA-203ENST00000543002 VAMP8Q9BV40 100 aa10.46□□□□□ -0.73
RABGGTA-203ENST00000543002 SPANXB1Q9NS25 103 aaPredicted RBP10.46□□□□□ -0.73
RABGGTA-203ENST00000543002 COX8AP10176 69 aa10.45□□□□□ -0.74
RABGGTA-203ENST00000543002 PAM16Q9Y3D7 125 aa10.45□□□□□ -0.74
RABGGTA-203ENST00000543002 IFITM1P13164 125 aa10.44□□□□□ -0.74
RABGGTA-203ENST00000543002 SPATA45Q537H7 98 aa10.44□□□□□ -0.74
RABGGTA-203ENST00000543002 REG3GQ6UW15 175 aa10.43□□□□□ -0.74
RABGGTA-203ENST00000543002 COPS9Q8WXC6 57 aa10.43□□□□□ -0.74
RABGGTA-203ENST00000543002 TMEM126AQ9H061 195 aa10.43□□□□□ -0.74
RABGGTA-203ENST00000543002 PPDPFQ9H3Y8 114 aa10.43□□□□□ -0.74
RABGGTA-203ENST00000543002 TRBV10-3A0A0K0K1G6 114 aa10.42□□□□□ -0.74
RABGGTA-203ENST00000543002 DLEU1O43261 78 aa10.42□□□□□ -0.74
RABGGTA-203ENST00000543002 ZNF861PO60384 105 aa10.41□□□□□ -0.74
RABGGTA-203ENST00000543002 DIRC1Q969H9 104 aa10.41□□□□□ -0.74
RABGGTA-203ENST00000543002 PKHD1L1Q86WI1 4243 aa10.41□□□□□ -0.74
RABGGTA-203ENST00000543002 PRYO14603 147 aa10.4□□□□□ -0.74
RABGGTA-203ENST00000543002 DDTP30046 118 aa10.4□□□□□ -0.74
RABGGTA-203ENST00000543002 MUSTN1Q8IVN3 82 aa10.4□□□□□ -0.74
RABGGTA-203ENST00000543002 C14orf144Q96I85 54 aa10.4□□□□□ -0.74
RABGGTA-203ENST00000543002 KCNQ1DNQ9H478 68 aa10.4□□□□□ -0.74
RABGGTA-203ENST00000543002 RPL28P46779 137 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-203ENST00000543002 S100A7L2Q5SY68 101 aa10.39□□□□□ -0.75
RABGGTA-203ENST00000543002 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-203ENST00000543002 H0Y9J4 135 aa10.38□□□□□ -0.75
RABGGTA-203ENST00000543002 OXTP01178 125 aa10.38□□□□□ -0.75
RABGGTA-203ENST00000543002 IGLV6-57P01721 117 aa10.38□□□□□ -0.75
RABGGTA-203ENST00000543002 S100A12P80511 92 aa10.38□□□□□ -0.75
RABGGTA-203ENST00000543002 KRTAP13-1Q8IUC0 172 aa10.38□□□□□ -0.75
RABGGTA-203ENST00000543002 LINC00518Q8N0U6 118 aa10.38□□□□□ -0.75
RABGGTA-203ENST00000543002 SPRR1AP35321 89 aa10.37□□□□□ -0.75
RABGGTA-203ENST00000543002 UBE2AP49459 152 aa10.37□□□□□ -0.75
RABGGTA-203ENST00000543002 MYCBP2O75592 4640 aa10.37□□□□□ -0.75
RABGGTA-203ENST00000543002 SLC25A34Q6PIV7 304 aa10.36□□□□□ -0.75
RABGGTA-203ENST00000543002 FAM19A1Q7Z5A9 133 aa10.36□□□□□ -0.75
RABGGTA-203ENST00000543002 PRLHP81277 87 aa10.34□□□□□ -0.75
RABGGTA-203ENST00000543002 LINC00337Q8N6G1 96 aa10.34□□□□□ -0.75
RABGGTA-203ENST00000543002 KRTAP4-16G5E9R7 235 aaPredicted RBP10.33□□□□□ -0.76
RABGGTA-203ENST00000543002 OR13C6PQ8NH95 151 aa10.33□□□□□ -0.76
RABGGTA-203ENST00000543002 HIGD1BQ9P298 99 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms