RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 MT-ATP8P03928 68 aa6.89□□□□□ -1.31
NPIPB3-210ENST00000542817 XGP55808 180 aa6.89□□□□□ -1.31
NPIPB3-210ENST00000542817 SPAG11BQ08648 103 aa6.89□□□□□ -1.31
NPIPB3-210ENST00000542817 LINC01620Q4KN68 170 aa6.89□□□□□ -1.31
NPIPB3-210ENST00000542817 C14orf177Q52M58 125 aa6.89□□□□□ -1.31
NPIPB3-210ENST00000542817 SCGB1C2P0DMR2 95 aa6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 PSMB2P49721 201 aa6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 KRTAP10-1P60331 282 aa6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 SRSF9Q13242 221 aaKnown RBP eCLIP6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 TMEM170BQ5T4T1 132 aa6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 C2orf82Q6UX34 121 aa6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 Q6ZRU5 148 aa6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 C2orf48Q96LS8 159 aa6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 VPS13BQ7Z7G8 4022 aa6.88□□□□□ -1.31
NPIPB3-210ENST00000542817 ZNF815PA8K554 130 aa6.87□□□□□ -1.31
NPIPB3-210ENST00000542817 TSPEAR-AS2P59090 65 aa6.87□□□□□ -1.31
NPIPB3-210ENST00000542817 UNQ6190/PRO20217Q6UXQ8 127 aa6.87□□□□□ -1.31
NPIPB3-210ENST00000542817 Q8IZM0 81 aa6.87□□□□□ -1.31
NPIPB3-210ENST00000542817 C9orf163Q8N9P6 203 aa6.87□□□□□ -1.31
NPIPB3-210ENST00000542817 PRO1854Q9UHT4 67 aa6.87□□□□□ -1.31
NPIPB3-210ENST00000542817 IGLV5-52A0A0A0MRZ9 124 aa6.86□□□□□ -1.31
NPIPB3-210ENST00000542817 A0A0B4J2C4 111 aa6.86□□□□□ -1.31
NPIPB3-210ENST00000542817 TCL1BO95988 128 aa6.86□□□□□ -1.31
NPIPB3-210ENST00000542817 RPL13AP40429 203 aaKnown RBP6.86□□□□□ -1.31
NPIPB3-210ENST00000542817 SDIM1Q6ZPB5 146 aa6.86□□□□□ -1.31
NPIPB3-210ENST00000542817 COX7B2Q8TF08 81 aa6.86□□□□□ -1.31
NPIPB3-210ENST00000542817 ANAPC13Q9BS18 74 aa6.86□□□□□ -1.31
NPIPB3-210ENST00000542817 C6orf48Q9UBA6 75 aa6.86□□□□□ -1.31
NPIPB3-210ENST00000542817 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
NPIPB3-210ENST00000542817 CFC1BP0CG36 223 aa6.85□□□□□ -1.31
NPIPB3-210ENST00000542817 CFC1P0CG37 223 aa6.85□□□□□ -1.31
NPIPB3-210ENST00000542817 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
NPIPB3-210ENST00000542817 SCGB1D4Q6XE38 83 aa6.85□□□□□ -1.31
NPIPB3-210ENST00000542817 ZNF625Q96I27 306 aaPredicted RBP6.85□□□□□ -1.31
NPIPB3-210ENST00000542817 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 LOC107984156A0A0G2JMH3 177 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 F8WDY8 70 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 PANO1I0J062 215 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 GAGE2BQ13066 116 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 GAGE2EQ4V326 116 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 ARL17AQ8IVW1 177 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 FAM30AQ9NZY2 134 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 TOMM7Q9P0U1 55 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 GAGE2DQ9UEU5 116 aa6.84□□□□□ -1.31
NPIPB3-210ENST00000542817 TRBV30A0A0K0K1B3 111 aa6.83□□□□□ -1.32
NPIPB3-210ENST00000542817 SLC25A20O43772 301 aa6.83□□□□□ -1.32
NPIPB3-210ENST00000542817 C9orf116Q5BN46 136 aaPredicted RBP6.83□□□□□ -1.32
NPIPB3-210ENST00000542817 C6orf226Q5I0X4 101 aa6.83□□□□□ -1.32
NPIPB3-210ENST00000542817 Q6ZSA8 131 aa6.83□□□□□ -1.32
NPIPB3-210ENST00000542817 CAMK2N2Q96S95 79 aa6.83□□□□□ -1.32
NPIPB3-210ENST00000542817 FAM240AA0A1B0GVK7 77 aa6.82□□□□□ -1.32
NPIPB3-210ENST00000542817 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
NPIPB3-210ENST00000542817 NDUFA1O15239 70 aa6.82□□□□□ -1.32
NPIPB3-210ENST00000542817 LEPROTO15243 131 aa6.82□□□□□ -1.32
NPIPB3-210ENST00000542817 ANKRD29Q8N6D5 301 aa6.82□□□□□ -1.32
NPIPB3-210ENST00000542817 PLEKHB2Q96CS7 222 aa6.82□□□□□ -1.32
NPIPB3-210ENST00000542817 SNCGO76070 127 aa6.81□□□□□ -1.32
NPIPB3-210ENST00000542817 PRSS2P07478 247 aa6.81□□□□□ -1.32
NPIPB3-210ENST00000542817 TLX1NBP0CAT3 122 aa6.81□□□□□ -1.32
NPIPB3-210ENST00000542817 IFITM1P13164 125 aa6.81□□□□□ -1.32
NPIPB3-210ENST00000542817 NDUFV3P56181 108 aaKnown RBP6.81□□□□□ -1.32
NPIPB3-210ENST00000542817 ATXN8Q156A1 80 aa6.81□□□□□ -1.32
NPIPB3-210ENST00000542817 SPANXCQ9NY87 97 aa6.81□□□□□ -1.32
NPIPB3-210ENST00000542817 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.81□□□□□ -1.32
NPIPB3-210ENST00000542817 TRBV10-2A0A0K0K1G8 114 aa6.8□□□□□ -1.32
NPIPB3-210ENST00000542817 CHTF8P0CG12 524 aa6.8□□□□□ -1.32
NPIPB3-210ENST00000542817 CXCL5P42830 114 aa6.8□□□□□ -1.32
NPIPB3-210ENST00000542817 CIRBPQ14011 172 aaKnown RBP6.8□□□□□ -1.32
NPIPB3-210ENST00000542817 Q6ZRP5 223 aa6.8□□□□□ -1.32
NPIPB3-210ENST00000542817 A0A096LNI7 61 aa6.79□□□□□ -1.32
NPIPB3-210ENST00000542817 H3BT86 120 aa6.79□□□□□ -1.32
NPIPB3-210ENST00000542817 J3QQQ9 107 aa6.79□□□□□ -1.32
NPIPB3-210ENST00000542817 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
NPIPB3-210ENST00000542817 IMUPQ9GZP8 106 aa6.79□□□□□ -1.32
NPIPB3-210ENST00000542817 TMEM126AQ9H061 195 aa6.79□□□□□ -1.32
NPIPB3-210ENST00000542817 KRTAP7-1Q8IUC3 87 aa6.78□□□□□ -1.32
NPIPB3-210ENST00000542817 NDUFA12Q9UI09 145 aa6.78□□□□□ -1.32
NPIPB3-210ENST00000542817 ABCA13Q86UQ4 5058 aa6.78□□□□□ -1.32
NPIPB3-210ENST00000542817 EPM2AB3EWF7 344 aa6.77□□□□□ -1.32
NPIPB3-210ENST00000542817 ACYP1P07311 99 aa6.77□□□□□ -1.32
NPIPB3-210ENST00000542817 LGALS3P17931 250 aaKnown RBP6.77□□□□□ -1.32
NPIPB3-210ENST00000542817 SPACA4Q8TDM5 124 aa6.77□□□□□ -1.32
NPIPB3-210ENST00000542817 LOC107984640A0A0U1RRK4 108 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 A4D1N5 150 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 B5MCH6 92 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 C9JAW5 83 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 NDUFC2-KCTD14E9PQ53 114 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 HAMPP81172 84 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 C9orf129Q5T035 196 aaKnown RBP6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 SRRM2Q9UQ35 2752 aaKnown RBP6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 TRBV7-7A0A0K0K1E9 115 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 LITAFQ99732 161 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 SS18L2Q9UHA2 77 aa6.76□□□□□ -1.33
NPIPB3-210ENST00000542817 IGKV2-24A0A0C4DH68 120 aa6.75□□□□□ -1.33
NPIPB3-210ENST00000542817 A0A0J9YXY3 114 aa6.75□□□□□ -1.33
NPIPB3-210ENST00000542817 A0A1W2PNN7 141 aa6.75□□□□□ -1.33
NPIPB3-210ENST00000542817 TIMM17BO60830 172 aa6.75□□□□□ -1.33
NPIPB3-210ENST00000542817 COX6CP09669 75 aa6.75□□□□□ -1.33
NPIPB3-210ENST00000542817 Q8NDZ9 215 aa6.75□□□□□ -1.33
NPIPB3-210ENST00000542817 CIRBP-AS1Q8TBR5 109 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 1252.5 ms