RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 FOCADQ5VW36 1801 aa-0.8□□□□□ -2.54
CCDC7-208ENST00000537047 USP34Q70CQ2 3546 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 MYH7P12883 1935 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 SYS1-DBNDD2H3BUS1 97 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 K7EP13 123 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 MT2AP02795 61 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 MT1MQ8N339 61 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 C1orf54Q8WWF1 131 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 TSC22D3Q99576 134 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 BTAF1O14981 1849 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 MKI67P46013 3256 aaKnown RBP-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 DNAJC13O75165 2243 aa-0.81□□□□□ -2.54
CCDC7-208ENST00000537047 KTN1Q86UP2 1357 aaKnown RBP-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 UBE2L5PA0A1B0GUS4 154 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 LOC100130705A0A1B0GUX0 176 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 AKAIN1P0CW23 69 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 MT1GP13640 62 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 UBE2L3P68036 154 aaKnown RBP-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 MT1XP80297 61 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 S100A12P80511 92 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 FAM223AQ8IWN6 122 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 FDCSPQ8NFU4 85 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 PRO1933Q9H354 126 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 REV3LO60673 3130 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 CEP350Q5VT06 3117 aa-0.82□□□□□ -2.54
CCDC7-208ENST00000537047 RANBP2P49792 3224 aaKnown RBP-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 OOSP1A8MZH6 123 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 ASIPP42127 132 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 MT1HP80294 61 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 FAM167A-AS1Q96KT0 104 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 LINC01600Q96MT4 127 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 KIAA0556O60303 1618 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 SHROOM2Q13796 1616 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 ARHGEF5Q12774 1597 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 TCHHQ07283 1943 aa-0.83□□□□□ -2.54
CCDC7-208ENST00000537047 HMGXB3Q12766 1538 aa-0.84□□□□□ -2.54
CCDC7-208ENST00000537047 VPS13CQ709C8 3753 aa-0.84□□□□□ -2.54
CCDC7-208ENST00000537047 PP6455Q8WZ26 134 aa-0.84□□□□□ -2.54
CCDC7-208ENST00000537047 SPTAN1Q13813 2472 aaKnown RBP-0.84□□□□□ -2.54
CCDC7-208ENST00000537047 TET3O43151 1660 aa-0.84□□□□□ -2.54
CCDC7-208ENST00000537047 SPTBN5Q9NRC6 3674 aaKnown RBP-0.85□□□□□ -2.54
CCDC7-208ENST00000537047 A2ML1A8K2U0 1454 aa-0.85□□□□□ -2.55
CCDC7-208ENST00000537047 F6UZH7 168 aa-0.85□□□□□ -2.55
CCDC7-208ENST00000537047 H0YAA0 97 aa-0.85□□□□□ -2.55
CCDC7-208ENST00000537047 MT1FP04733 61 aa-0.85□□□□□ -2.55
CCDC7-208ENST00000537047 ATP5EP56381 51 aaPredicted RBP-0.85□□□□□ -2.55
CCDC7-208ENST00000537047 C9orf153Q5TBE3 101 aa-0.85□□□□□ -2.55
CCDC7-208ENST00000537047 ROBO1Q9Y6N7 1651 aa-0.85□□□□□ -2.55
CCDC7-208ENST00000537047 A0A1B0GWA3 101 aa-0.86□□□□□ -2.55
CCDC7-208ENST00000537047 FAM24AA6NFZ4 105 aa-0.86□□□□□ -2.55
CCDC7-208ENST00000537047 COX6CP09669 75 aa-0.86□□□□□ -2.55
CCDC7-208ENST00000537047 GNG11P61952 73 aa-0.86□□□□□ -2.55
CCDC7-208ENST00000537047 DPH3P1Q9H4G8 78 aa-0.86□□□□□ -2.55
CCDC7-208ENST00000537047 QRICH2Q9H0J4 1663 aa-0.86□□□□□ -2.55
CCDC7-208ENST00000537047 EHBP1L1Q8N3D4 1523 aa-0.86□□□□□ -2.55
CCDC7-208ENST00000537047 ACACAQ13085 2346 aa-0.87□□□□□ -2.55
CCDC7-208ENST00000537047 HMGN1P05114 100 aa-0.87□□□□□ -2.55
CCDC7-208ENST00000537047 FAM107BQ9H098 131 aa-0.87□□□□□ -2.55
CCDC7-208ENST00000537047 MANBALQ9NQG1 85 aa-0.87□□□□□ -2.55
CCDC7-208ENST00000537047 APLNQ9ULZ1 77 aa-0.87□□□□□ -2.55
CCDC7-208ENST00000537047 C1orf167Q5SNV9 1468 aa-0.87□□□□□ -2.55
CCDC7-208ENST00000537047 WDFY3Q8IZQ1 3526 aa-0.88□□□□□ -2.55
CCDC7-208ENST00000537047 A0A0G2JMZ2 1700 aa-0.88□□□□□ -2.55
CCDC7-208ENST00000537047 CPSF4LA6NMK7 179 aaKnown RBP-0.88□□□□□ -2.55
CCDC7-208ENST00000537047 SMR3BP02814 79 aaPredicted RBP-0.88□□□□□ -2.55
CCDC7-208ENST00000537047 TRAPPC2P0DI81 140 aa-0.88□□□□□ -2.55
CCDC7-208ENST00000537047 TRAPPC2BP0DI82 140 aa-0.88□□□□□ -2.55
CCDC7-208ENST00000537047 Q0VG73 95 aa-0.88□□□□□ -2.55
CCDC7-208ENST00000537047 CFAP47Q6ZTR5 3102 aa-0.88□□□□□ -2.55
CCDC7-208ENST00000537047 FRYLO94915 3013 aa-0.89□□□□□ -2.55
CCDC7-208ENST00000537047 UBE2D3P61077 147 aa-0.89□□□□□ -2.55
CCDC7-208ENST00000537047 UBE2D2P62837 147 aa-0.89□□□□□ -2.55
CCDC7-208ENST00000537047 DEFB135Q30KP9 77 aa-0.89□□□□□ -2.55
CCDC7-208ENST00000537047 PRO1854Q9UHT4 67 aa-0.89□□□□□ -2.55
CCDC7-208ENST00000537047 CCDC141Q6ZP82 1450 aa-0.89□□□□□ -2.55
CCDC7-208ENST00000537047 NBASA2RRP1 2371 aa-0.89□□□□□ -2.55
CCDC7-208ENST00000537047 DNAH12Q6ZR08 3092 aa-0.9□□□□□ -2.55
CCDC7-208ENST00000537047 ADGRL2O95490 1459 aa-0.9□□□□□ -2.55
CCDC7-208ENST00000537047 NAP1L6A6NFF2 107 aa-0.9□□□□□ -2.55
CCDC7-208ENST00000537047 MT1EP04732 61 aa-0.9□□□□□ -2.55
CCDC7-208ENST00000537047 SEC11AP67812 179 aa-0.9□□□□□ -2.55
CCDC7-208ENST00000537047 LCN9Q8WX39 176 aa-0.9□□□□□ -2.55
CCDC7-208ENST00000537047 SCAPERQ9BY12 1400 aa-0.9□□□□□ -2.55
CCDC7-208ENST00000537047 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.9□□□□□ -2.55
CCDC7-208ENST00000537047 CDH23Q9H251 3354 aa-0.91□□□□□ -2.55
CCDC7-208ENST00000537047 DIP2CQ9Y2E4 1556 aa-0.91□□□□□ -2.55
CCDC7-208ENST00000537047 ROCK2O75116 1388 aaKnown RBP-0.91□□□□□ -2.55
CCDC7-208ENST00000537047 XRN1Q8IZH2 1706 aaKnown RBP-0.91□□□□□ -2.55
CCDC7-208ENST00000537047 FMN2Q9NZ56 1722 aa-0.91□□□□□ -2.55
CCDC7-208ENST00000537047 FAM223BA6NKX1 122 aa-0.91□□□□□ -2.56
CCDC7-208ENST00000537047 SNAPC5O75971 98 aa-0.91□□□□□ -2.56
CCDC7-208ENST00000537047 SAA2P0DJI9 122 aaPredicted RBP-0.91□□□□□ -2.56
CCDC7-208ENST00000537047 C12orf57Q99622 126 aa-0.91□□□□□ -2.56
CCDC7-208ENST00000537047 IER3IP1Q9Y5U9 82 aa-0.91□□□□□ -2.56
CCDC7-208ENST00000537047 MRC2Q9UBG0 1479 aa-0.92□□□□□ -2.56
CCDC7-208ENST00000537047 C9orf62Q8N4C0 152 aa-0.92□□□□□ -2.56
CCDC7-208ENST00000537047 CEP250Q9BV73 2442 aa-0.93□□□□□ -2.56
CCDC7-208ENST00000537047 DEFB1P60022 68 aa-0.93□□□□□ -2.56
CCDC7-208ENST00000537047 SFTA2Q6UW10 78 aa-0.93□□□□□ -2.56
CCDC7-208ENST00000537047 SVBPQ8N300 66 aa-0.93□□□□□ -2.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms