RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 C1orf64Q8NEQ6 169 aa2.58□□□□□ -2
MCF2-210ENST00000536274 K7EMT4 169 aa2.58□□□□□ -2
MCF2-210ENST00000536274 PRYO14603 147 aa2.58□□□□□ -2
MCF2-210ENST00000536274 PLA2G1BP04054 148 aaKnown RBP2.58□□□□□ -2
MCF2-210ENST00000536274 BSPH1Q075Z2 132 aa2.58□□□□□ -2
MCF2-210ENST00000536274 Q8N6K4 173 aa2.58□□□□□ -2
MCF2-210ENST00000536274 LAMTOR3Q9UHA4 124 aa2.58□□□□□ -2
MCF2-210ENST00000536274 IGHV3-53P01767 116 aa2.58□□□□□ -2
MCF2-210ENST00000536274 SYCNQ0VAF6 134 aa2.58□□□□□ -2
MCF2-210ENST00000536274 CD164L2Q6UWJ8 174 aa2.58□□□□□ -2
MCF2-210ENST00000536274 DPM3Q9P2X0 92 aa2.58□□□□□ -2
MCF2-210ENST00000536274 CELSR2Q9HCU4 2923 aa2.57□□□□□ -2
MCF2-210ENST00000536274 A0A0A0MQY5 61 aa2.57□□□□□ -2
MCF2-210ENST00000536274 IGLV5-39A0A0G2JS06 123 aa2.57□□□□□ -2
MCF2-210ENST00000536274 A0A1W2PPR1 153 aa2.57□□□□□ -2
MCF2-210ENST00000536274 M0R378 163 aa2.57□□□□□ -2
MCF2-210ENST00000536274 hDV103S1A0JD37 113 aa2.57□□□□□ -2
MCF2-210ENST00000536274 C16orf90A8MZG2 172 aa2.57□□□□□ -2
MCF2-210ENST00000536274 E7EQL1 145 aa2.57□□□□□ -2
MCF2-210ENST00000536274 TMEM256-PLSCR3K7ERE1 68 aa2.57□□□□□ -2
MCF2-210ENST00000536274 IGHV4-31P0DP07 118 aa2.57□□□□□ -2
MCF2-210ENST00000536274 KRTAP24-1Q3LI83 254 aa2.57□□□□□ -2
MCF2-210ENST00000536274 Q8N814 137 aa2.57□□□□□ -2
MCF2-210ENST00000536274 LINC00588Q9Y4M8 146 aa2.57□□□□□ -2
MCF2-210ENST00000536274 NBEAL2Q6ZNJ1 2754 aa2.57□□□□□ -2
MCF2-210ENST00000536274 KLLNB2CW77 178 aa2.56□□□□□ -2
MCF2-210ENST00000536274 C8orf87E5RJ46 101 aa2.56□□□□□ -2
MCF2-210ENST00000536274 Q6ZQT0 140 aa2.56□□□□□ -2
MCF2-210ENST00000536274 NPBQ8NG41 125 aa2.56□□□□□ -2
MCF2-210ENST00000536274 RHPN1-AS1Q9BWJ2 59 aa2.56□□□□□ -2
MCF2-210ENST00000536274 CSMD3Q7Z407 3707 aa2.56□□□□□ -2
MCF2-210ENST00000536274 FSHBP01225 129 aa2.56□□□□□ -2
MCF2-210ENST00000536274 KTN1-AS1Q86SY8 53 aa2.56□□□□□ -2
MCF2-210ENST00000536274 LINC00612Q8N6U2 182 aa2.56□□□□□ -2
MCF2-210ENST00000536274 COPS9Q8WXC6 57 aa2.56□□□□□ -2
MCF2-210ENST00000536274 PRAC1Q96KF2 57 aa2.56□□□□□ -2
MCF2-210ENST00000536274 H0YGX0 51 aa2.56□□□□□ -2
MCF2-210ENST00000536274 Q8NDZ9 215 aa2.56□□□□□ -2
MCF2-210ENST00000536274 CHKB-CPT1BH3BT56 60 aa2.55□□□□□ -2
MCF2-210ENST00000536274 C9orf116Q5BN46 136 aaPredicted RBP2.55□□□□□ -2
MCF2-210ENST00000536274 ATP5EP2Q5VTU8 51 aa2.55□□□□□ -2
MCF2-210ENST00000536274 C1orf158Q8N1D5 194 aa2.55□□□□□ -2
MCF2-210ENST00000536274 LINC01560Q8TB33 94 aa2.55□□□□□ -2
MCF2-210ENST00000536274 LENEPQ9Y5L5 61 aa2.55□□□□□ -2
MCF2-210ENST00000536274 WNK1Q9H4A3 2382 aa2.55□□□□□ -2
MCF2-210ENST00000536274 UTP20O75691 2785 aaKnown RBP2.55□□□□□ -2
MCF2-210ENST00000536274 SONP18583 2426 aaKnown RBP2.55□□□□□ -2
MCF2-210ENST00000536274 C6orf99Q4VX62 202 aa2.55□□□□□ -2
MCF2-210ENST00000536274 CLPSL2Q6UWE3 100 aa2.55□□□□□ -2
MCF2-210ENST00000536274 NTM-AS1Q6ZSK4 140 aa2.55□□□□□ -2
MCF2-210ENST00000536274 ANKHD1Q8IWZ3 2542 aaKnown RBP2.55□□□□□ -2
MCF2-210ENST00000536274 IGLV5-45A0A087WSX0 123 aa2.55□□□□□ -2
MCF2-210ENST00000536274 IGHV4-28A0A0C4DH34 117 aa2.55□□□□□ -2
MCF2-210ENST00000536274 ODF3BA8MYP8 253 aa2.55□□□□□ -2
MCF2-210ENST00000536274 Q5VV11 94 aa2.55□□□□□ -2
MCF2-210ENST00000536274 LCA10Q71F78 164 aa2.55□□□□□ -2
MCF2-210ENST00000536274 LINC00269Q8N2A0 174 aa2.55□□□□□ -2
MCF2-210ENST00000536274 KLK12Q9UKR0 248 aa2.55□□□□□ -2
MCF2-210ENST00000536274 ITPR3Q14573 2671 aa2.55□□□□□ -2
MCF2-210ENST00000536274 HCG22E2RYF7 251 aa2.54□□□□□ -2
MCF2-210ENST00000536274 JMJD7-PLA2G4BH0Y9G9 81 aa2.54□□□□□ -2
MCF2-210ENST00000536274 ZNF73O43830 326 aaPredicted RBP2.54□□□□□ -2
MCF2-210ENST00000536274 DEFB116Q30KQ4 102 aa2.54□□□□□ -2
MCF2-210ENST00000536274 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
MCF2-210ENST00000536274 ADM2Q7Z4H4 148 aa2.54□□□□□ -2
MCF2-210ENST00000536274 KRTAP4-9Q9BYQ8 210 aa2.54□□□□□ -2
MCF2-210ENST00000536274 TRBV10-3A0A0K0K1G6 114 aa2.54□□□□□ -2
MCF2-210ENST00000536274 LOC100131303A0A0U1RQF7 123 aa2.54□□□□□ -2
MCF2-210ENST00000536274 C3orf84H3BNL1 204 aa2.54□□□□□ -2
MCF2-210ENST00000536274 NDUFC1O43677 76 aa2.54□□□□□ -2
MCF2-210ENST00000536274 FN1P02751 2386 aaKnown RBP2.54□□□□□ -2
MCF2-210ENST00000536274 JMJD1CQ15652 2540 aa2.54□□□□□ -2
MCF2-210ENST00000536274 IGLV4-60A0A075B6I1 120 aa2.54□□□□□ -2
MCF2-210ENST00000536274 LY6EQ16553 131 aa2.54□□□□□ -2
MCF2-210ENST00000536274 Q1T7F1 81 aa2.54□□□□□ -2
MCF2-210ENST00000536274 C10orf99Q6UWK7 81 aa2.54□□□□□ -2
MCF2-210ENST00000536274 SMIM29Q86T20 159 aa2.54□□□□□ -2
MCF2-210ENST00000536274 SMR3AQ99954 134 aa2.54□□□□□ -2
MCF2-210ENST00000536274 TRBV6-4A0A1B0GX49 114 aa2.53□□□□□ -2
MCF2-210ENST00000536274 MINOS1Q5TGZ0 78 aa2.53□□□□□ -2
MCF2-210ENST00000536274 Q6ZQY7 126 aa2.53□□□□□ -2
MCF2-210ENST00000536274 RNF5Q99942 180 aa2.53□□□□□ -2
MCF2-210ENST00000536274 OVOL2Q9BRP0 275 aa2.53□□□□□ -2
MCF2-210ENST00000536274 PRR15LQ9BU68 103 aa2.53□□□□□ -2
MCF2-210ENST00000536274 OCR1Q9BZK8 76 aa2.53□□□□□ -2
MCF2-210ENST00000536274 CENPEQ02224 2701 aa2.53□□□□□ -2
MCF2-210ENST00000536274 B4DSR2 109 aa2.53□□□□□ -2
MCF2-210ENST00000536274 CCL24O00175 119 aa2.53□□□□□ -2
MCF2-210ENST00000536274 ZFP36P26651 326 aaKnown RBP2.53□□□□□ -2
MCF2-210ENST00000536274 ATP5EP56381 51 aaPredicted RBP2.53□□□□□ -2
MCF2-210ENST00000536274 ST20-AS1Q8NBB2 130 aa2.53□□□□□ -2
MCF2-210ENST00000536274 KAAG1Q9UBP8 84 aa2.53□□□□□ -2
MCF2-210ENST00000536274 DNAJC9-AS1A6NH13 148 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 PSCAO43653 123 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 IGKV4-1P06312 121 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 VPREB1P12018 145 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 FAM19A3Q7Z5A8 133 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 IGHV4-30-2A0A087WSY4 118 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 DYNLRB2Q8TF09 96 aa2.52□□□□□ -2.01
MCF2-210ENST00000536274 CDC42SE2Q9NRR3 84 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms