RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 KRTAP7-1Q8IUC3 87 aa13.49□□□□□ -0.25
SSPN-204ENST00000535504 C20orf202A1L168 122 aa13.48□□□□□ -0.25
SSPN-204ENST00000535504 NMUP48645 174 aa13.48□□□□□ -0.25
SSPN-204ENST00000535504 A0A0U1RRA0 63 aa13.47□□□□□ -0.25
SSPN-204ENST00000535504 J3QQQ9 107 aa13.47□□□□□ -0.25
SSPN-204ENST00000535504 IGLV7-43P04211 117 aa13.47□□□□□ -0.25
SSPN-204ENST00000535504 IGLV5-37A0A075B6J1 123 aa13.46□□□□□ -0.25
SSPN-204ENST00000535504 DIRC1Q969H9 104 aa13.46□□□□□ -0.25
SSPN-204ENST00000535504 KRTDAPP60985 99 aa13.45□□□□□ -0.26
SSPN-204ENST00000535504 SMIM13P0DJ93 91 aa13.44□□□□□ -0.26
SSPN-204ENST00000535504 AKR1D1P51857 326 aa13.44□□□□□ -0.26
SSPN-204ENST00000535504 LINC01545Q5VT33 79 aa13.44□□□□□ -0.26
SSPN-204ENST00000535504 GAGE10A6NGK3 116 aa13.43□□□□□ -0.26
SSPN-204ENST00000535504 S100A6P06703 90 aa13.43□□□□□ -0.26
SSPN-204ENST00000535504 S100A2P29034 98 aa13.43□□□□□ -0.26
SSPN-204ENST00000535504 SRSF9Q13242 221 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSPN-204ENST00000535504 LINC00167Q96N53 147 aa13.43□□□□□ -0.26
SSPN-204ENST00000535504 MYCBP2O75592 4640 aa13.42□□□□□ -0.26
SSPN-204ENST00000535504 RPL37AP8A6NKH3 93 aa13.41□□□□□ -0.26
SSPN-204ENST00000535504 E9PLD3 99 aa13.41□□□□□ -0.26
SSPN-204ENST00000535504 C3orf79P0CE67 100 aa13.41□□□□□ -0.26
SSPN-204ENST00000535504 MIR7-3HGQ8N6C7 128 aa13.4□□□□□ -0.26
SSPN-204ENST00000535504 MIEN1Q9BRT3 115 aa13.4□□□□□ -0.26
SSPN-204ENST00000535504 VPREB1P12018 145 aa13.39□□□□□ -0.27
SSPN-204ENST00000535504 TSPEAR-AS2P59090 65 aa13.39□□□□□ -0.27
SSPN-204ENST00000535504 KRTAP11-1Q8IUC1 163 aa13.39□□□□□ -0.27
SSPN-204ENST00000535504 RPL28P46779 137 aaKnown RBP13.37□□□□□ -0.27
SSPN-204ENST00000535504 BOD1L2Q8IYS8 172 aa13.37□□□□□ -0.27
SSPN-204ENST00000535504 PKHD1L1Q86WI1 4243 aa13.37□□□□□ -0.27
SSPN-204ENST00000535504 IGKV2-28A0A075B6P5 120 aa13.36□□□□□ -0.27
SSPN-204ENST00000535504 BCE1O60756 84 aa13.36□□□□□ -0.27
SSPN-204ENST00000535504 IGKV2D-28P01615 120 aa13.36□□□□□ -0.27
SSPN-204ENST00000535504 H0Y9J4 135 aa13.35□□□□□ -0.27
SSPN-204ENST00000535504 UBE2AP49459 152 aa13.35□□□□□ -0.27
SSPN-204ENST00000535504 S100A12P80511 92 aa13.35□□□□□ -0.27
SSPN-204ENST00000535504 LINC01600Q96MT4 127 aa13.35□□□□□ -0.27
SSPN-204ENST00000535504 M0R378 163 aa13.34□□□□□ -0.27
SSPN-204ENST00000535504 ZNF861PO60384 105 aa13.34□□□□□ -0.27
SSPN-204ENST00000535504 IGLV1-50A0A075B6I6 118 aa13.31□□□□□ -0.28
SSPN-204ENST00000535504 IGKV2D-26A0A0A0MRZ7 120 aa13.31□□□□□ -0.28
SSPN-204ENST00000535504 A0A0J9YXY3 114 aa13.29□□□□□ -0.28
SSPN-204ENST00000535504 ZNF815PA8K554 130 aa13.29□□□□□ -0.28
SSPN-204ENST00000535504 HIST3H2BBQ8N257 126 aa13.29□□□□□ -0.28
SSPN-204ENST00000535504 DAND5Q8N907 189 aa13.29□□□□□ -0.28
SSPN-204ENST00000535504 NCR3O14931 201 aa13.28□□□□□ -0.28
SSPN-204ENST00000535504 FAM19A1Q7Z5A9 133 aa13.27□□□□□ -0.29
SSPN-204ENST00000535504 SNRPEP62304 92 aaKnown RBP13.26□□□□□ -0.29
SSPN-204ENST00000535504 TMEM126AQ9H061 195 aa13.26□□□□□ -0.29
SSPN-204ENST00000535504 HSBP1L1C9JCN9 74 aa13.25□□□□□ -0.29
SSPN-204ENST00000535504 HIST1H2BLQ99880 126 aa13.25□□□□□ -0.29
SSPN-204ENST00000535504 SCGB1D4Q6XE38 83 aa13.24□□□□□ -0.29
SSPN-204ENST00000535504 LRP1Q07954 4544 aaKnown RBP13.24□□□□□ -0.29
SSPN-204ENST00000535504 LOC107984156A0A0G2JMH3 177 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 PRYO14603 147 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 TIMM17BO60830 172 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 MT1HL1P0DM35 61 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 ARL17AQ8IVW1 177 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 ATOH7Q8N100 152 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 Q8NDZ9 215 aa13.23□□□□□ -0.29
SSPN-204ENST00000535504 SPANXB1Q9NS25 103 aaPredicted RBP13.23□□□□□ -0.29
SSPN-204ENST00000535504 FAT3Q8TDW7 4589 aa13.22□□□□□ -0.29
SSPN-204ENST00000535504 TMEM238C9JI98 176 aa13.22□□□□□ -0.29
SSPN-204ENST00000535504 TRBV10-2A0A0K0K1G8 114 aa13.21□□□□□ -0.29
SSPN-204ENST00000535504 NDUFC2O95298 119 aa13.21□□□□□ -0.29
SSPN-204ENST00000535504 S100A7L2Q5SY68 101 aa13.21□□□□□ -0.29
SSPN-204ENST00000535504 COPS9Q8WXC6 57 aa13.21□□□□□ -0.29
SSPN-204ENST00000535504 RPL13AP40429 203 aaKnown RBP13.2□□□□□ -0.3
SSPN-204ENST00000535504 NPC2P61916 151 aa13.2□□□□□ -0.3
SSPN-204ENST00000535504 CBY1Q9Y3M2 126 aa13.2□□□□□ -0.3
SSPN-204ENST00000535504 DDTP30046 118 aa13.18□□□□□ -0.3
SSPN-204ENST00000535504 PRLHP81277 87 aa13.18□□□□□ -0.3
SSPN-204ENST00000535504 TRBV10-3A0A0K0K1G6 114 aa13.17□□□□□ -0.3
SSPN-204ENST00000535504 ETDCA0A1B0GVM5 59 aa13.17□□□□□ -0.3
SSPN-204ENST00000535504 KRTAP10-8P60410 259 aa13.16□□□□□ -0.3
SSPN-204ENST00000535504 ANKRD39Q53RE8 183 aa13.16□□□□□ -0.3
SSPN-204ENST00000535504 ADAMTSL4-AS1Q5T5F5 129 aa13.16□□□□□ -0.3
SSPN-204ENST00000535504 KCNQ1DNQ9H478 68 aa13.16□□□□□ -0.3
SSPN-204ENST00000535504 PRR26Q8N8Z3 221 aa13.15□□□□□ -0.3
SSPN-204ENST00000535504 TTTY13Q9BZ97 58 aa13.15□□□□□ -0.3
SSPN-204ENST00000535504 SCGB1D1O95968 90 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 KRTAP13-1Q8IUC0 172 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 LINC00308Q8TCZ7 52 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 HIGD2AQ9BW72 106 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 SPANXCQ9NY87 97 aa13.14□□□□□ -0.31
SSPN-204ENST00000535504 HERC1Q15751 4861 aa13.13□□□□□ -0.31
SSPN-204ENST00000535504 LINC00337Q8N6G1 96 aa13.13□□□□□ -0.31
SSPN-204ENST00000535504 C5orf52A6NGY3 159 aa13.12□□□□□ -0.31
SSPN-204ENST00000535504 KRTAP1-4P0C5Y4 121 aa13.12□□□□□ -0.31
SSPN-204ENST00000535504 CRYGAP11844 174 aa13.11□□□□□ -0.31
SSPN-204ENST00000535504 Q6ZVH6 145 aa13.11□□□□□ -0.31
SSPN-204ENST00000535504 LITAFQ99732 161 aa13.11□□□□□ -0.31
SSPN-204ENST00000535504 HINT1P49773 126 aaPredicted RBP13.1□□□□□ -0.31
SSPN-204ENST00000535504 SOSTDC1Q6X4U4 206 aa13.1□□□□□ -0.31
SSPN-204ENST00000535504 LINC00518Q8N0U6 118 aa13.1□□□□□ -0.31
SSPN-204ENST00000535504 OR13C6PQ8NH95 151 aa13.1□□□□□ -0.31
SSPN-204ENST00000535504 SPANXDQ9BXN6 97 aa13.1□□□□□ -0.31
SSPN-204ENST00000535504 ZNF706Q9Y5V0 76 aaPredicted RBP13.1□□□□□ -0.31
SSPN-204ENST00000535504 TRAV23DV6A0A075B6W5 121 aa13.08□□□□□ -0.32
SSPN-204ENST00000535504 IFITM1P13164 125 aa13.08□□□□□ -0.32
SSPN-204ENST00000535504 SPRR1AP35321 89 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms