RNA–Protein interactions for RNA: ENST00000530730.1

CHKA-205, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-205ENST00000530730 K7EMI3 77 aa4.43□□□□□ -1.7
CHKA-205ENST00000530730 NUPR1O60356 82 aa4.43□□□□□ -1.7
CHKA-205ENST00000530730 HSBP1O75506 76 aa4.43□□□□□ -1.7
CHKA-205ENST00000530730 FABP4P15090 132 aa4.43□□□□□ -1.7
CHKA-205ENST00000530730 SYCNQ0VAF6 134 aa4.43□□□□□ -1.7
CHKA-205ENST00000530730 MAJINQ3KP22 176 aa4.43□□□□□ -1.7
CHKA-205ENST00000530730 C7orf33Q8WU49 177 aa4.43□□□□□ -1.7
CHKA-205ENST00000530730 CDKN2A-AS1Q9UH64 79 aa4.43□□□□□ -1.7
CHKA-205ENST00000530730 APOMO95445 188 aa4.42□□□□□ -1.7
CHKA-205ENST00000530730 KRTAP10-8P60410 259 aa4.42□□□□□ -1.7
CHKA-205ENST00000530730 RAB5BP61020 215 aa4.42□□□□□ -1.7
CHKA-205ENST00000530730 PMVKQ15126 192 aa4.42□□□□□ -1.7
CHKA-205ENST00000530730 C9orf116Q5BN46 136 aaPredicted RBP4.42□□□□□ -1.7
CHKA-205ENST00000530730 PDZD11Q5EBL8 140 aa4.42□□□□□ -1.7
CHKA-205ENST00000530730 UNQ6190/PRO20217Q6UXQ8 127 aa4.42□□□□□ -1.7
CHKA-205ENST00000530730 PACRGQ96M98 296 aaPredicted RBP4.42□□□□□ -1.7
CHKA-205ENST00000530730 PMCHL2Q9BQD1 86 aa4.42□□□□□ -1.7
CHKA-205ENST00000530730 CST9LQ9H4G1 147 aa4.42□□□□□ -1.7
CHKA-205ENST00000530730 A0A087WZ39 114 aa4.41□□□□□ -1.7
CHKA-205ENST00000530730 PRR3P79522 188 aaKnown RBP4.41□□□□□ -1.7
CHKA-205ENST00000530730 UBE2V1Q13404 147 aa4.41□□□□□ -1.7
CHKA-205ENST00000530730 C11orf86A6NJI1 115 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 NDUFA1O15239 70 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BKO60814 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BJP06899 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 ZNF22P17026 224 aaPredicted RBP4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BOP23527 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 G0S2P27469 103 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BBP33778 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BDP58876 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BCP62807 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HERVK_113P63121 156 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 SRSF9Q13242 221 aaKnown RBP eCLIP4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST2H2BEQ16778 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.4□□□□□ -1.71
CHKA-205ENST00000530730 TMEM170BQ5T4T1 132 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 OR10D4PQ8NGN7 298 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BHQ93079 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 IFI27L1Q96BM0 104 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 CHCHD1Q96BP2 118 aaKnown RBP4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BNQ99877 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 HIST1H2BMQ99879 126 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 C6orf48Q9UBA6 75 aa4.4□□□□□ -1.71
CHKA-205ENST00000530730 CHTOPQ9Y3Y2 248 aaKnown RBP4.4□□□□□ -1.71
CHKA-205ENST00000530730 TINCRA0A1B0GVN0 87 aa4.39□□□□□ -1.71
CHKA-205ENST00000530730 ATP5LO75964 103 aa4.39□□□□□ -1.71
CHKA-205ENST00000530730 KIAA0087Q14695 138 aa4.39□□□□□ -1.71
CHKA-205ENST00000530730 SPINK6Q6UWN8 80 aa4.39□□□□□ -1.71
CHKA-205ENST00000530730 FAM19A5Q7Z5A7 132 aaPredicted RBP4.39□□□□□ -1.71
CHKA-205ENST00000530730 KRTAP4-3Q9BYR4 195 aa4.39□□□□□ -1.71
CHKA-205ENST00000530730 MRPL35Q9NZE8 188 aaKnown RBP4.39□□□□□ -1.71
CHKA-205ENST00000530730 LOC107984640A0A0U1RRK4 108 aa4.38□□□□□ -1.71
CHKA-205ENST00000530730 FAM168BA1KXE4 195 aa4.38□□□□□ -1.71
CHKA-205ENST00000530730 LEPROTL1O95214 131 aa4.38□□□□□ -1.71
CHKA-205ENST00000530730 IGLC3P0DOY3 106 aa4.38□□□□□ -1.71
CHKA-205ENST00000530730 CKS1BP61024 79 aa4.38□□□□□ -1.71
CHKA-205ENST00000530730 C6orf226Q5I0X4 101 aa4.38□□□□□ -1.71
CHKA-205ENST00000530730 COX7B2Q8TF08 81 aa4.38□□□□□ -1.71
CHKA-205ENST00000530730 ZNF625Q96I27 306 aaPredicted RBP4.38□□□□□ -1.71
CHKA-205ENST00000530730 LINC00474Q9P2X8 69 aa4.38□□□□□ -1.71
CHKA-205ENST00000530730 S100A1P23297 94 aa4.37□□□□□ -1.71
CHKA-205ENST00000530730 SEC11AP67812 179 aa4.37□□□□□ -1.71
CHKA-205ENST00000530730 REG3GQ6UW15 175 aa4.37□□□□□ -1.71
CHKA-205ENST00000530730 Q6ZRP5 223 aa4.37□□□□□ -1.71
CHKA-205ENST00000530730 FAM19A3Q7Z5A8 133 aa4.37□□□□□ -1.71
CHKA-205ENST00000530730 C2orf48Q96LS8 159 aa4.37□□□□□ -1.71
CHKA-205ENST00000530730 LPAP08519 4548 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 A0A0U1RRA0 63 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 A0A1W2PNN7 141 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 LINC01549A6NIU2 74 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 H3BRM9 83 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 KRTAP13-3Q3SY46 172 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 LCE3AQ5TA76 89 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 PHF5AQ7RTV0 110 aaKnown RBP4.36□□□□□ -1.71
CHKA-205ENST00000530730 Q8IZM0 81 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
CHKA-205ENST00000530730 F8VRH5 84 aa4.35□□□□□ -1.71
CHKA-205ENST00000530730 PFN2P35080 140 aa4.35□□□□□ -1.71
CHKA-205ENST00000530730 KRTAP12-2P59991 146 aa4.35□□□□□ -1.71
CHKA-205ENST00000530730 TRAV12-1A0A0B4J245 112 aa4.34□□□□□ -1.71
CHKA-205ENST00000530730 TSPEAR-AS2P59090 65 aa4.34□□□□□ -1.71
CHKA-205ENST00000530730 KRTDAPP60985 99 aa4.34□□□□□ -1.71
CHKA-205ENST00000530730 C9orf129Q5T035 196 aaKnown RBP4.34□□□□□ -1.71
CHKA-205ENST00000530730 HSPB8Q9UJY1 196 aa4.34□□□□□ -1.71
CHKA-205ENST00000530730 PKIGQ9Y2B9 76 aa4.34□□□□□ -1.71
CHKA-205ENST00000530730 TRBV30A0A0K0K1B3 111 aa4.33□□□□□ -1.72
CHKA-205ENST00000530730 TMEM223A0PJW6 202 aa4.33□□□□□ -1.72
CHKA-205ENST00000530730 A8MU10 97 aa4.33□□□□□ -1.72
CHKA-205ENST00000530730 M0QXV9 152 aa4.33□□□□□ -1.72
CHKA-205ENST00000530730 ATOH7Q8N100 152 aa4.33□□□□□ -1.72
CHKA-205ENST00000530730 LINC01561Q8N1V8 128 aa4.33□□□□□ -1.72
CHKA-205ENST00000530730 MAP1LC3CQ9BXW4 147 aa4.33□□□□□ -1.72
CHKA-205ENST00000530730 NDUFC2-KCTD14E9PQ53 114 aa4.32□□□□□ -1.72
CHKA-205ENST00000530730 DPM2O94777 84 aa4.32□□□□□ -1.72
CHKA-205ENST00000530730 IGKCP01834 107 aa4.32□□□□□ -1.72
CHKA-205ENST00000530730 C3orf79P0CE67 100 aa4.32□□□□□ -1.72
CHKA-205ENST00000530730 KRTAP11-1Q8IUC1 163 aa4.32□□□□□ -1.72
CHKA-205ENST00000530730 PSORS1C2Q9UIG4 136 aa4.32□□□□□ -1.72
CHKA-205ENST00000530730 SYS1-DBNDD2H3BUS1 97 aa4.31□□□□□ -1.72
CHKA-205ENST00000530730 CXCL5P42830 114 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms