RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 Q6ZRN7 208 aaPredicted RBP4.41□□□□□ -1.7
PVT1-217ENST00000523190 LINC00308Q8TCZ7 52 aa4.41□□□□□ -1.7
PVT1-217ENST00000523190 RAB37Q96AX2 223 aa4.41□□□□□ -1.7
PVT1-217ENST00000523190 TRBV30A0A0K0K1B3 111 aa4.4□□□□□ -1.71
PVT1-217ENST00000523190 PLA2G1BP04054 148 aaKnown RBP4.4□□□□□ -1.71
PVT1-217ENST00000523190 RPL24P83731 157 aaKnown RBP4.4□□□□□ -1.71
PVT1-217ENST00000523190 CARD19Q96LW7 228 aa4.4□□□□□ -1.71
PVT1-217ENST00000523190 SIGMAR1Q99720 223 aa4.4□□□□□ -1.71
PVT1-217ENST00000523190 NAA38Q9BRA0 125 aaKnown RBP4.4□□□□□ -1.71
PVT1-217ENST00000523190 STARD9Q9P2P6 4700 aa4.4□□□□□ -1.71
PVT1-217ENST00000523190 F8WDY8 70 aa4.39□□□□□ -1.71
PVT1-217ENST00000523190 TRIAP1O43715 76 aa4.39□□□□□ -1.71
PVT1-217ENST00000523190 SLPIP03973 132 aa4.39□□□□□ -1.71
PVT1-217ENST00000523190 COX17Q14061 63 aa4.39□□□□□ -1.71
PVT1-217ENST00000523190 LYRM7Q5U5X0 104 aa4.39□□□□□ -1.71
PVT1-217ENST00000523190 CSMD3Q7Z407 3707 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.38□□□□□ -1.71
PVT1-217ENST00000523190 TRBV20-1A0A075B6N2 111 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.38□□□□□ -1.71
PVT1-217ENST00000523190 LRCOL1A6NCL2 159 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 CFC1BP0CG36 223 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 CFC1P0CG37 223 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
PVT1-217ENST00000523190 COPS9Q8WXC6 57 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 SND1-IT1Q9HBX3 110 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 VPS13DQ5THJ4 4388 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 ALMS1Q8TCU4 4167 aa4.38□□□□□ -1.71
PVT1-217ENST00000523190 DNAH1Q9P2D7 4330 aa4.37□□□□□ -1.71
PVT1-217ENST00000523190 A0A0B4J2C4 111 aa4.37□□□□□ -1.71
PVT1-217ENST00000523190 C14orf177Q52M58 125 aa4.37□□□□□ -1.71
PVT1-217ENST00000523190 C1orf134Q5TEV5 83 aa4.37□□□□□ -1.71
PVT1-217ENST00000523190 PPDPFQ9H3Y8 114 aa4.37□□□□□ -1.71
PVT1-217ENST00000523190 A0A087WTM6 91 aa4.36□□□□□ -1.71
PVT1-217ENST00000523190 NDUFC2-KCTD14E9PQ53 114 aa4.36□□□□□ -1.71
PVT1-217ENST00000523190 TSPAN13O95857 204 aa4.36□□□□□ -1.71
PVT1-217ENST00000523190 RPL18AQ02543 176 aaKnown RBP4.36□□□□□ -1.71
PVT1-217ENST00000523190 ETDBQ3ZM63 59 aa4.36□□□□□ -1.71
PVT1-217ENST00000523190 GAGE2EQ4V326 116 aa4.36□□□□□ -1.71
PVT1-217ENST00000523190 TEN1Q86WV5 123 aa4.36□□□□□ -1.71
PVT1-217ENST00000523190 XAGE1AQ9HD64 81 aa4.36□□□□□ -1.71
PVT1-217ENST00000523190 GAGE2DQ9UEU5 116 aa4.36□□□□□ -1.71
PVT1-217ENST00000523190 IGKV2-28A0A075B6P5 120 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 LOC107984156A0A0G2JMH3 177 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 H7C2G1 150 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 NCR3O14931 201 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 IGKV2D-28P01615 120 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 TLX1NBP0CAT3 122 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 RPL13AP40429 203 aaKnown RBP4.35□□□□□ -1.71
PVT1-217ENST00000523190 CNBPP62633 177 aaKnown RBP4.35□□□□□ -1.71
PVT1-217ENST00000523190 Q6ZRP5 223 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 ARL17AQ8IVW1 177 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 MTURNQ8N3F0 131 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 Q8N814 137 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 Q8NDZ9 215 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 PPDPFLQ8WWR9 84 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 PRO1854Q9UHT4 67 aa4.35□□□□□ -1.71
PVT1-217ENST00000523190 LOC107984640A0A0U1RRK4 108 aa4.34□□□□□ -1.71
PVT1-217ENST00000523190 A0A1B0GV72 72 aa4.34□□□□□ -1.71
PVT1-217ENST00000523190 NDUFC2O95298 119 aa4.34□□□□□ -1.71
PVT1-217ENST00000523190 PRR3P79522 188 aaKnown RBP4.34□□□□□ -1.71
PVT1-217ENST00000523190 GAGE2BQ13066 116 aa4.34□□□□□ -1.71
PVT1-217ENST00000523190 Q1RN00 199 aa4.34□□□□□ -1.71
PVT1-217ENST00000523190 C9orf129Q5T035 196 aaKnown RBP4.34□□□□□ -1.71
PVT1-217ENST00000523190 LINC00337Q8N6G1 96 aa4.34□□□□□ -1.71
PVT1-217ENST00000523190 TGP01266 2768 aa4.33□□□□□ -1.72
PVT1-217ENST00000523190 TENM2Q9NT68 2774 aa4.33□□□□□ -1.72
PVT1-217ENST00000523190 LCE6AA0A183 80 aa4.33□□□□□ -1.72
PVT1-217ENST00000523190 RTL8CO15255 209 aa4.33□□□□□ -1.72
PVT1-217ENST00000523190 FUSP35637 526 aaKnown RBP eCLIP4.33□□□□□ -1.72
PVT1-217ENST00000523190 OR13C6PQ8NH95 151 aa4.33□□□□□ -1.72
PVT1-217ENST00000523190 DNAH6Q9C0G6 4158 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 A0A096LNI7 61 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 TRAV13-2A0A0B4J235 113 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 TCL1BO95988 128 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 VPREB1P12018 145 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 LINC01620Q4KN68 170 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 Q6Q795 121 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 C9orf163Q8N9P6 203 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 LYSTQ99698 3801 aa4.32□□□□□ -1.72
PVT1-217ENST00000523190 IGKV2-24A0A0C4DH68 120 aa4.31□□□□□ -1.72
PVT1-217ENST00000523190 PSMB2P49721 201 aa4.31□□□□□ -1.72
PVT1-217ENST00000523190 SERTAD4-AS1Q5TG53 156 aa4.31□□□□□ -1.72
PVT1-217ENST00000523190 TRBV10-2A0A0K0K1G8 114 aa4.3□□□□□ -1.72
PVT1-217ENST00000523190 FAM168BA1KXE4 195 aa4.3□□□□□ -1.72
PVT1-217ENST00000523190 C16orf90A8MZG2 172 aa4.3□□□□□ -1.72
PVT1-217ENST00000523190 CHTF8P0CG12 524 aa4.3□□□□□ -1.72
PVT1-217ENST00000523190 S100A7L2Q5SY68 101 aa4.3□□□□□ -1.72
PVT1-217ENST00000523190 FAM19A5Q7Z5A7 132 aaPredicted RBP4.3□□□□□ -1.72
PVT1-217ENST00000523190 SMIM11BQ8TCY0 68 aa4.3□□□□□ -1.72
PVT1-217ENST00000523190 IGLV5-52A0A0A0MRZ9 124 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 FAM240AA0A1B0GVK7 77 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 M0R378 163 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 SCGB1C2P0DMR2 95 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 XGP55808 180 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 KRTAP7-1Q8IUC3 87 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 NKAPP1Q8N9T2 125 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 TMEM126AQ9H061 195 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 PKIGQ9Y2B9 76 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 DNAH10Q8IVF4 4471 aa4.29□□□□□ -1.72
PVT1-217ENST00000523190 IGLV5-37A0A075B6J1 123 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms