RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PRR26Q8N8Z3 221 aa8.01□□□□□ -1.13
VEGFA-219ENST00000518824 ZNF861PO60384 105 aa7.99□□□□□ -1.13
VEGFA-219ENST00000518824 SMIM13P0DJ93 91 aa7.99□□□□□ -1.13
VEGFA-219ENST00000518824 LINC00158P58513 81 aa7.99□□□□□ -1.13
VEGFA-219ENST00000518824 COX17Q14061 63 aa7.99□□□□□ -1.13
VEGFA-219ENST00000518824 NKAPP1Q8N9T2 125 aa7.99□□□□□ -1.13
VEGFA-219ENST00000518824 HSPB8Q9UJY1 196 aa7.99□□□□□ -1.13
VEGFA-219ENST00000518824 IGKV2-28A0A075B6P5 120 aa7.98□□□□□ -1.13
VEGFA-219ENST00000518824 IGKV2D-28P01615 120 aa7.98□□□□□ -1.13
VEGFA-219ENST00000518824 HMCN2Q8NDA2 5059 aa7.97□□□□□ -1.13
VEGFA-219ENST00000518824 BCE1O60756 84 aa7.97□□□□□ -1.13
VEGFA-219ENST00000518824 NDUFA12Q9UI09 145 aa7.97□□□□□ -1.13
VEGFA-219ENST00000518824 TMEM238C9JI98 176 aa7.96□□□□□ -1.14
VEGFA-219ENST00000518824 LEPROTO15243 131 aa7.96□□□□□ -1.14
VEGFA-219ENST00000518824 DPM2O94777 84 aa7.96□□□□□ -1.14
VEGFA-219ENST00000518824 KRTAP13-1Q8IUC0 172 aa7.96□□□□□ -1.14
VEGFA-219ENST00000518824 IGLV1-50A0A075B6I6 118 aa7.95□□□□□ -1.14
VEGFA-219ENST00000518824 IGKCP01834 107 aa7.95□□□□□ -1.14
VEGFA-219ENST00000518824 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
VEGFA-219ENST00000518824 SFTA2Q6UW10 78 aa7.95□□□□□ -1.14
VEGFA-219ENST00000518824 MIR7-3HGQ8N6C7 128 aa7.95□□□□□ -1.14
VEGFA-219ENST00000518824 PLNP26678 52 aa7.94□□□□□ -1.14
VEGFA-219ENST00000518824 DAND5Q8N907 189 aa7.94□□□□□ -1.14
VEGFA-219ENST00000518824 MAP1LC3CQ9BXW4 147 aa7.94□□□□□ -1.14
VEGFA-219ENST00000518824 SYS1-DBNDD2H3BUS1 97 aa7.93□□□□□ -1.14
VEGFA-219ENST00000518824 J3QQQ9 107 aa7.93□□□□□ -1.14
VEGFA-219ENST00000518824 RPL24P83731 157 aaKnown RBP7.93□□□□□ -1.14
VEGFA-219ENST00000518824 ANAPC11Q9NYG5 84 aa7.93□□□□□ -1.14
VEGFA-219ENST00000518824 MYMXA0A1B0GTQ4 84 aa7.92□□□□□ -1.14
VEGFA-219ENST00000518824 M0R378 163 aa7.92□□□□□ -1.14
VEGFA-219ENST00000518824 RPL28P46779 137 aaKnown RBP7.92□□□□□ -1.14
VEGFA-219ENST00000518824 HERV-K104P63124 156 aa7.92□□□□□ -1.14
VEGFA-219ENST00000518824 PRLHP81277 87 aa7.92□□□□□ -1.14
VEGFA-219ENST00000518824 PLEKHB2Q96CS7 222 aa7.92□□□□□ -1.14
VEGFA-219ENST00000518824 TMEM126AQ9H061 195 aa7.92□□□□□ -1.14
VEGFA-219ENST00000518824 NCR3O14931 201 aa7.91□□□□□ -1.14
VEGFA-219ENST00000518824 BOD1L2Q8IYS8 172 aa7.91□□□□□ -1.14
VEGFA-219ENST00000518824 A0A087X002 238 aa7.9□□□□□ -1.14
VEGFA-219ENST00000518824 EIF4EBP3O60516 100 aaPredicted RBP7.9□□□□□ -1.14
VEGFA-219ENST00000518824 UBE2AP49459 152 aa7.9□□□□□ -1.14
VEGFA-219ENST00000518824 COA6Q5JTJ3 125 aaKnown RBP7.9□□□□□ -1.14
VEGFA-219ENST00000518824 LINC01545Q5VT33 79 aa7.9□□□□□ -1.14
VEGFA-219ENST00000518824 ATP6V1G1O75348 118 aa7.89□□□□□ -1.15
VEGFA-219ENST00000518824 C3orf79P0CE67 100 aa7.89□□□□□ -1.15
VEGFA-219ENST00000518824 HERVK_113P61574 105 aa7.89□□□□□ -1.15
VEGFA-219ENST00000518824 FAM19A1Q7Z5A9 133 aa7.89□□□□□ -1.15
VEGFA-219ENST00000518824 E9PLD3 99 aa7.88□□□□□ -1.15
VEGFA-219ENST00000518824 LGALS3P17931 250 aaKnown RBP7.88□□□□□ -1.15
VEGFA-219ENST00000518824 ADAMTSL4-AS1Q5T5F5 129 aa7.88□□□□□ -1.15
VEGFA-219ENST00000518824 IGKV2D-26A0A0A0MRZ7 120 aa7.87□□□□□ -1.15
VEGFA-219ENST00000518824 SOSTDC1Q6X4U4 206 aa7.87□□□□□ -1.15
VEGFA-219ENST00000518824 TTTY13Q9BZ97 58 aa7.87□□□□□ -1.15
VEGFA-219ENST00000518824 A0A0J9YXY3 114 aa7.86□□□□□ -1.15
VEGFA-219ENST00000518824 NPC2P61916 151 aa7.86□□□□□ -1.15
VEGFA-219ENST00000518824 KRTAP13-2Q52LG2 175 aa7.86□□□□□ -1.15
VEGFA-219ENST00000518824 PET117Q6UWS5 81 aa7.86□□□□□ -1.15
VEGFA-219ENST00000518824 LOC107984156A0A0G2JMH3 177 aa7.85□□□□□ -1.15
VEGFA-219ENST00000518824 TRBV10-3A0A0K0K1G6 114 aa7.85□□□□□ -1.15
VEGFA-219ENST00000518824 NMUP48645 174 aa7.85□□□□□ -1.15
VEGFA-219ENST00000518824 KRTDAPP60985 99 aa7.85□□□□□ -1.15
VEGFA-219ENST00000518824 ARL17AQ8IVW1 177 aa7.85□□□□□ -1.15
VEGFA-219ENST00000518824 LINC00587B1AMM8 73 aa7.84□□□□□ -1.15
VEGFA-219ENST00000518824 KRTAP4-16G5E9R7 235 aaPredicted RBP7.83□□□□□ -1.16
VEGFA-219ENST00000518824 LITAFQ99732 161 aa7.83□□□□□ -1.16
VEGFA-219ENST00000518824 PRYO14603 147 aa7.82□□□□□ -1.16
VEGFA-219ENST00000518824 SPRR1AP35321 89 aa7.82□□□□□ -1.16
VEGFA-219ENST00000518824 RPL13AP40429 203 aaKnown RBP7.82□□□□□ -1.16
VEGFA-219ENST00000518824 ATOH7Q8N100 152 aa7.82□□□□□ -1.16
VEGFA-219ENST00000518824 HIGD2AQ9BW72 106 aa7.82□□□□□ -1.16
VEGFA-219ENST00000518824 KCNQ1DNQ9H478 68 aa7.82□□□□□ -1.16
VEGFA-219ENST00000518824 CRYGAP11844 174 aa7.81□□□□□ -1.16
VEGFA-219ENST00000518824 S100A1P23297 94 aa7.8□□□□□ -1.16
VEGFA-219ENST00000518824 LRP2P98164 4655 aa7.8□□□□□ -1.16
VEGFA-219ENST00000518824 ANKRD39Q53RE8 183 aa7.8□□□□□ -1.16
VEGFA-219ENST00000518824 TYMSOSQ8TAI1 123 aa7.8□□□□□ -1.16
VEGFA-219ENST00000518824 ZNF815PA8K554 130 aa7.79□□□□□ -1.16
VEGFA-219ENST00000518824 TSPAN13O95857 204 aa7.79□□□□□ -1.16
VEGFA-219ENST00000518824 C3orf22Q8N5N4 141 aa7.79□□□□□ -1.16
VEGFA-219ENST00000518824 LPAP08519 4548 aa7.78□□□□□ -1.16
VEGFA-219ENST00000518824 TRBV10-2A0A0K0K1G8 114 aa7.78□□□□□ -1.16
VEGFA-219ENST00000518824 DDTP30046 118 aa7.78□□□□□ -1.16
VEGFA-219ENST00000518824 HIST3H2BBQ8N257 126 aa7.78□□□□□ -1.16
VEGFA-219ENST00000518824 LINC00337Q8N6G1 96 aa7.78□□□□□ -1.16
VEGFA-219ENST00000518824 UBR4Q5T4S7 5183 aa7.78□□□□□ -1.16
VEGFA-219ENST00000518824 NDUFC2O95298 119 aa7.77□□□□□ -1.17
VEGFA-219ENST00000518824 FAM229BQ4G0N7 80 aa7.77□□□□□ -1.17
VEGFA-219ENST00000518824 SMCR5Q8TEV8 140 aa7.77□□□□□ -1.17
VEGFA-219ENST00000518824 SPRR4Q96PI1 79 aa7.77□□□□□ -1.17
VEGFA-219ENST00000518824 MIEN1Q9BRT3 115 aa7.77□□□□□ -1.17
VEGFA-219ENST00000518824 SPANXB1Q9NS25 103 aaPredicted RBP7.77□□□□□ -1.17
VEGFA-219ENST00000518824 ETDCA0A1B0GVM5 59 aa7.76□□□□□ -1.17
VEGFA-219ENST00000518824 B5MCH6 92 aa7.76□□□□□ -1.17
VEGFA-219ENST00000518824 ERC2-IT1O76042 136 aa7.76□□□□□ -1.17
VEGFA-219ENST00000518824 IGLV6-57P01721 117 aa7.76□□□□□ -1.17
VEGFA-219ENST00000518824 LINC00308Q8TCZ7 52 aa7.76□□□□□ -1.17
VEGFA-219ENST00000518824 TIMM17BO60830 172 aa7.75□□□□□ -1.17
VEGFA-219ENST00000518824 HIST1H2BLQ99880 126 aa7.75□□□□□ -1.17
VEGFA-219ENST00000518824 Q9BRP9 147 aa7.75□□□□□ -1.17
VEGFA-219ENST00000518824 PCP2Q8IVA1 136 aa7.74□□□□□ -1.17
VEGFA-219ENST00000518824 PPDPFQ9H3Y8 114 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms