RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 LINC00158P58513 81 aa14.73□□□□□ -0.05
PVT1-204ENST00000517525 Q8NDZ9 215 aa14.72□□□□□ -0.05
PVT1-204ENST00000517525 SCO1O75880 301 aa14.71□□□□□ -0.05
PVT1-204ENST00000517525 NDUFA12Q9UI09 145 aa14.71□□□□□ -0.05
PVT1-204ENST00000517525 H0Y8G0 127 aa14.7□□□□□ -0.06
PVT1-204ENST00000517525 FABP4P15090 132 aa14.7□□□□□ -0.06
PVT1-204ENST00000517525 IGKV2-28A0A075B6P5 120 aa14.69□□□□□ -0.06
PVT1-204ENST00000517525 MYMXA0A1B0GTQ4 84 aa14.69□□□□□ -0.06
PVT1-204ENST00000517525 DPM2O94777 84 aa14.69□□□□□ -0.06
PVT1-204ENST00000517525 IGKV2D-28P01615 120 aa14.69□□□□□ -0.06
PVT1-204ENST00000517525 LEPROTO15243 131 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BKO60814 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BJP06899 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 SMIM13P0DJ93 91 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BOP23527 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BBP33778 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BDP58876 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BCP62807 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST2H2BEQ16778 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BHQ93079 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 PLEKHB2Q96CS7 222 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BNQ99877 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 HIST1H2BMQ99879 126 aa14.68□□□□□ -0.06
PVT1-204ENST00000517525 MEIG1Q5JSS6 88 aa14.66□□□□□ -0.06
PVT1-204ENST00000517525 MAP1LC3CQ9BXW4 147 aa14.66□□□□□ -0.06
PVT1-204ENST00000517525 TMEM126AQ9H061 195 aa14.66□□□□□ -0.06
PVT1-204ENST00000517525 IGKCP01834 107 aa14.65□□□□□ -0.06
PVT1-204ENST00000517525 UBE2AP49459 152 aa14.65□□□□□ -0.06
PVT1-204ENST00000517525 A0A0U1RRA0 63 aa14.64□□□□□ -0.07
PVT1-204ENST00000517525 M0R378 163 aa14.64□□□□□ -0.07
PVT1-204ENST00000517525 ATP6V1G1O75348 118 aa14.64□□□□□ -0.07
PVT1-204ENST00000517525 TSPEAR-AS2P59090 65 aa14.64□□□□□ -0.07
PVT1-204ENST00000517525 HERVK_113P61574 105 aa14.64□□□□□ -0.07
PVT1-204ENST00000517525 MIR7-3HGQ8N6C7 128 aa14.64□□□□□ -0.07
PVT1-204ENST00000517525 NMUP48645 174 aa14.63□□□□□ -0.07
PVT1-204ENST00000517525 LOC107984156A0A0G2JMH3 177 aa14.62□□□□□ -0.07
PVT1-204ENST00000517525 J3QQQ9 107 aa14.62□□□□□ -0.07
PVT1-204ENST00000517525 ARL17AQ8IVW1 177 aa14.62□□□□□ -0.07
PVT1-204ENST00000517525 TMEM238C9JI98 176 aa14.61□□□□□ -0.07
PVT1-204ENST00000517525 PMCHL2Q9BQD1 86 aa14.61□□□□□ -0.07
PVT1-204ENST00000517525 IGKV2D-26A0A0A0MRZ7 120 aa14.6□□□□□ -0.07
PVT1-204ENST00000517525 BOD1L2Q8IYS8 172 aa14.6□□□□□ -0.07
PVT1-204ENST00000517525 SYS1-DBNDD2H3BUS1 97 aa14.58□□□□□ -0.08
PVT1-204ENST00000517525 CRYGAP11844 174 aa14.58□□□□□ -0.08
PVT1-204ENST00000517525 FAM229BQ4G0N7 80 aa14.57□□□□□ -0.08
PVT1-204ENST00000517525 COA6Q5JTJ3 125 aaKnown RBP14.57□□□□□ -0.08
PVT1-204ENST00000517525 FAM19A1Q7Z5A9 133 aa14.57□□□□□ -0.08
PVT1-204ENST00000517525 LRP2P98164 4655 aa14.56□□□□□ -0.08
PVT1-204ENST00000517525 A0A087X002 238 aa14.56□□□□□ -0.08
PVT1-204ENST00000517525 E9PLD3 99 aa14.55□□□□□ -0.08
PVT1-204ENST00000517525 LGALS3P17931 250 aaKnown RBP14.55□□□□□ -0.08
PVT1-204ENST00000517525 PRLHP81277 87 aa14.55□□□□□ -0.08
PVT1-204ENST00000517525 KCNQ1DNQ9H478 68 aa14.54□□□□□ -0.08
PVT1-204ENST00000517525 PRYO14603 147 aa14.53□□□□□ -0.08
PVT1-204ENST00000517525 SPRR1AP35321 89 aa14.53□□□□□ -0.08
PVT1-204ENST00000517525 LINC01545Q5VT33 79 aa14.53□□□□□ -0.08
PVT1-204ENST00000517525 PET117Q6UWS5 81 aa14.52□□□□□ -0.09
PVT1-204ENST00000517525 TRBV10-2A0A0K0K1G8 114 aa14.5□□□□□ -0.09
PVT1-204ENST00000517525 LINC00337Q8N6G1 96 aa14.5□□□□□ -0.09
PVT1-204ENST00000517525 TYMSOSQ8TAI1 123 aa14.49□□□□□ -0.09
PVT1-204ENST00000517525 KRTAP4-16G5E9R7 235 aaPredicted RBP14.48□□□□□ -0.09
PVT1-204ENST00000517525 NCR3O14931 201 aa14.48□□□□□ -0.09
PVT1-204ENST00000517525 KRTAP13-2Q52LG2 175 aa14.48□□□□□ -0.09
PVT1-204ENST00000517525 DAND5Q8N907 189 aa14.48□□□□□ -0.09
PVT1-204ENST00000517525 ANAPC11Q9NYG5 84 aa14.48□□□□□ -0.09
PVT1-204ENST00000517525 NDUFC2O95298 119 aa14.47□□□□□ -0.09
PVT1-204ENST00000517525 A0A0J9YXY3 114 aa14.46□□□□□ -0.09
PVT1-204ENST00000517525 TRBV10-3A0A0K0K1G6 114 aa14.46□□□□□ -0.09
PVT1-204ENST00000517525 SPANXB1Q9NS25 103 aaPredicted RBP14.44□□□□□ -0.1
PVT1-204ENST00000517525 C3orf79P0CE67 100 aa14.43□□□□□ -0.1
PVT1-204ENST00000517525 MIEN1Q9BRT3 115 aa14.43□□□□□ -0.1
PVT1-204ENST00000517525 HIGD2AQ9BW72 106 aa14.43□□□□□ -0.1
PVT1-204ENST00000517525 S100A12P80511 92 aa14.42□□□□□ -0.1
PVT1-204ENST00000517525 CTAG1AP78358 180 aa14.41□□□□□ -0.1
PVT1-204ENST00000517525 ADAMTSL4-AS1Q5T5F5 129 aa14.41□□□□□ -0.1
PVT1-204ENST00000517525 TIMM17BO60830 172 aa14.4□□□□□ -0.1
PVT1-204ENST00000517525 SPRR4Q96PI1 79 aa14.4□□□□□ -0.1
PVT1-204ENST00000517525 IGLV6-57P01721 117 aa14.39□□□□□ -0.11
PVT1-204ENST00000517525 DDTP30046 118 aa14.39□□□□□ -0.11
PVT1-204ENST00000517525 SOSTDC1Q6X4U4 206 aa14.39□□□□□ -0.11
PVT1-204ENST00000517525 ZNF706Q9Y5V0 76 aaPredicted RBP14.39□□□□□ -0.11
PVT1-204ENST00000517525 ETDCA0A1B0GVM5 59 aa14.38□□□□□ -0.11
PVT1-204ENST00000517525 LITAFQ99732 161 aa14.38□□□□□ -0.11
PVT1-204ENST00000517525 EIF4EBP3O60516 100 aaPredicted RBP14.36□□□□□ -0.11
PVT1-204ENST00000517525 B5MCH6 92 aa14.35□□□□□ -0.11
PVT1-204ENST00000517525 TSPAN13O95857 204 aa14.34□□□□□ -0.11
PVT1-204ENST00000517525 KRTDAPP60985 99 aa14.34□□□□□ -0.11
PVT1-204ENST00000517525 LINC00304Q8N9R0 145 aa14.34□□□□□ -0.11
PVT1-204ENST00000517525 SMCR5Q8TEV8 140 aa14.34□□□□□ -0.11
PVT1-204ENST00000517525 C20orf202A1L168 122 aa14.32□□□□□ -0.12
PVT1-204ENST00000517525 S100A1P23297 94 aa14.32□□□□□ -0.12
PVT1-204ENST00000517525 AKR1D1P51857 326 aa14.32□□□□□ -0.12
PVT1-204ENST00000517525 ZNF815PA8K554 130 aa14.31□□□□□ -0.12
PVT1-204ENST00000517525 S100A7L2Q5SY68 101 aa14.31□□□□□ -0.12
PVT1-204ENST00000517525 LINC00308Q8TCZ7 52 aa14.31□□□□□ -0.12
PVT1-204ENST00000517525 PRR4Q16378 134 aa14.3□□□□□ -0.12
PVT1-204ENST00000517525 SPANXCQ9NY87 97 aa14.3□□□□□ -0.12
PVT1-204ENST00000517525 LINC00483Q53H64 154 aa14.29□□□□□ -0.12
PVT1-204ENST00000517525 Q6ZRX8 168 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms