RNA–Protein interactions for RNA: ENST00000516080.1

RNU4-49P-201, Transcript of RNA, U4 small nuclear 49, pseudogene, humanhuman

BASIC

Gene RNU4-49P, Length 140 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-49P-201ENST00000516080 MYOZ3Q8TDC0 251 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 PP6455Q8WZ26 134 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 TSLPQ969D9 159 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 PRAP1Q96NZ9 151 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 SELENOSQ9BQE4 189 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 SNRNP25Q9BV90 132 aaKnown RBP-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 ATPIF1Q9UII2 106 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 APOBP04114 4563 aaKnown RBP-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 MAGI2Q86UL8 1455 aa-0.69□□□□□ -2.52
RNU4-49P-201ENST00000516080 ROCK1Q13464 1354 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 EIF3AQ14152 1382 aaKnown RBP-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 CC2D2AQ9P2K1 1620 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 FAM223BA6NKX1 122 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 CHKB-CPT1BH3BT56 60 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 TRAPPC2P0DI81 140 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 TRAPPC2BP0DI82 140 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 SAA2P0DJI9 122 aaPredicted RBP-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 NEFHP12036 1026 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 MT1GP13640 62 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 RPL38P63173 70 aaKnown RBP-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 RGS21Q2M5E4 152 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 KRTAP19-5Q3LI72 72 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 C12orf73Q69YU5 71 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 DEFB106AQ8N104 65 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 VAMP8Q9BV40 100 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 GID8Q9NWU2 228 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 AP4S1Q9Y587 144 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 RGPD1P0DJD0 1748 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 SPHKAPQ2M3C7 1700 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 NRAPQ86VF7 1730 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 DOT1LQ8TEK3 1739 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 FAM135AQ9P2D6 1515 aa-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 DYNC1H1Q14204 4646 aaKnown RBP-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.7□□□□□ -2.52
RNU4-49P-201ENST00000516080 DEPDC5O75140 1603 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 OVOS2A0A0J9YW53 1432 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 OVOS2Q6IE36 1432 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 SMG6Q86US8 1419 aaKnown RBP-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 A2ML1A8K2U0 1454 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 LRRC9Q6ZRR7 1453 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 LRBAP50851 2863 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 TJP1Q07157 1748 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 LRRIQ1Q96JM4 1722 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 TRAV36DV7A0A075B6V5 113 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 A0A0G2JND7 137 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 FAM236AA0A1B0GUQ0 79 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 UBE2L5PA0A1B0GUS4 154 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 FAM236BA0A1B0GV22 79 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 H3BQF6 201 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 K7ERU9 68 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 M0QX08 132 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 NDUFA3O95167 84 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 MT1EP04732 61 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 MT1BP07438 61 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 SCGB1A1P11684 91 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 GUCA1AP43080 201 aaPredicted RBP-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 UBE2L3P68036 154 aaKnown RBP-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 KRTAP20-1Q3LI63 56 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 CCDC153Q494R4 210 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 SKA2Q8WVK7 121 aaPredicted RBP-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 COPS9Q8WXC6 57 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 MT1LQ93083 61 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 ARL11Q969Q4 196 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 C12orf57Q99622 126 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 HOPXQ9BPY8 73 aaPredicted RBP-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 MANBALQ9NQG1 85 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 HIGD1AQ9Y241 93 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 NWD1Q149M9 1564 aa-0.71□□□□□ -2.52
RNU4-49P-201ENST00000516080 KIF1AQ12756 1690 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 CPSF1Q10570 1443 aaKnown RBP-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 BPTFQ12830 3046 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 RICTORQ6R327 1708 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 ADGRL2O95490 1459 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 CEP295Q9C0D2 2601 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 A0A1B0GV72 72 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 F6UZH7 168 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 H0Y9P7 68 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 TNFSF15O95150 251 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 MT2AP02795 61 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 DBIP07108 87 aaKnown RBP-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 COX6CP09669 75 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 SCTP09683 121 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 CTXN2P0C2S0 81 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 ARMS2P0C7Q2 107 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 TFAMQ00059 246 aaKnown RBP-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 TMEM128Q5BJH2 165 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 SFTA2Q6UW10 78 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 TOMM20LQ6UXN7 152 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 DEFB107AQ8IZN7 70 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 MT1MQ8N339 61 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 CDC26Q8NHZ8 85 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 PDCD10Q9BUL8 212 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 PCBD2Q9H0N5 130 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 BOLA2Q9H3K6 86 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 SPANXCQ9NY87 97 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 SMPXQ9UHP9 88 aa-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 SPTAN1Q13813 2472 aaKnown RBP-0.72□□□□□ -2.52
RNU4-49P-201ENST00000516080 CSMD1Q96PZ7 3565 aa-0.72□□□□□ -2.53
RNU4-49P-201ENST00000516080 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.73□□□□□ -2.53
RNU4-49P-201ENST00000516080 ARFGEF2Q9Y6D5 1785 aa-0.73□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms