RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 Q9UF83 564 aa9.14□□□□□ -0.95
TCOF1-213ENST00000514442 ZNF575Q86XF7 245 aa9.14□□□□□ -0.95
TCOF1-213ENST00000514442 Q6ZQT0 140 aa9.13□□□□□ -0.95
TCOF1-213ENST00000514442 LINC00474Q9P2X8 69 aa9.13□□□□□ -0.95
TCOF1-213ENST00000514442 PRR15LQ9BU68 103 aa9.13□□□□□ -0.95
TCOF1-213ENST00000514442 HECTD1Q9ULT8 2610 aa9.12□□□□□ -0.95
TCOF1-213ENST00000514442 KLKP1Q107X0 134 aa9.12□□□□□ -0.95
TCOF1-213ENST00000514442 UNC80Q8N2C7 3258 aa9.12□□□□□ -0.95
TCOF1-213ENST00000514442 H7BZZ5 65 aa9.12□□□□□ -0.95
TCOF1-213ENST00000514442 TM2D3Q9BRN9 247 aa9.11□□□□□ -0.95
TCOF1-213ENST00000514442 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
TCOF1-213ENST00000514442 FSHBP01225 129 aa9.11□□□□□ -0.95
TCOF1-213ENST00000514442 EGFEM1PQ0D2K5 195 aa9.11□□□□□ -0.95
TCOF1-213ENST00000514442 FLNBO75369 2602 aaKnown RBP9.11□□□□□ -0.95
TCOF1-213ENST00000514442 LAMA2P24043 3122 aaKnown RBP9.11□□□□□ -0.95
TCOF1-213ENST00000514442 NUPR2A6NF83 97 aa9.1□□□□□ -0.95
TCOF1-213ENST00000514442 A0A1B0GUV1 79 aa9.1□□□□□ -0.95
TCOF1-213ENST00000514442 KRTAP24-1Q3LI83 254 aa9.09□□□□□ -0.95
TCOF1-213ENST00000514442 Q5XG85 94 aa9.09□□□□□ -0.95
TCOF1-213ENST00000514442 DHRS4-AS1Q9P1J3 65 aa9.09□□□□□ -0.95
TCOF1-213ENST00000514442 KLK9Q2XQG4 91 aa9.09□□□□□ -0.95
TCOF1-213ENST00000514442 SPATA3Q8NHX4 192 aa9.09□□□□□ -0.95
TCOF1-213ENST00000514442 C7orf33Q8WU49 177 aa9.09□□□□□ -0.95
TCOF1-213ENST00000514442 F8P00451 2351 aa9.08□□□□□ -0.96
TCOF1-213ENST00000514442 Q8N9L7 120 aa9.07□□□□□ -0.96
TCOF1-213ENST00000514442 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
TCOF1-213ENST00000514442 A8MTW9 85 aa9.07□□□□□ -0.96
TCOF1-213ENST00000514442 IGLV9-49A0A0B4J1Y8 123 aa9.06□□□□□ -0.96
TCOF1-213ENST00000514442 A0A0C4DFX4 3053 aa9.06□□□□□ -0.96
TCOF1-213ENST00000514442 IGHV3OR16-9A0A0B4J2B5 98 aa9.06□□□□□ -0.96
TCOF1-213ENST00000514442 X6R8D5 127 aa9.05□□□□□ -0.96
TCOF1-213ENST00000514442 SPINK6Q6UWN8 80 aa9.05□□□□□ -0.96
TCOF1-213ENST00000514442 ERC2-IT1O76042 136 aa9.05□□□□□ -0.96
TCOF1-213ENST00000514442 IGKV4-1P06312 121 aa9.04□□□□□ -0.96
TCOF1-213ENST00000514442 Q6ZRU5 148 aa9.04□□□□□ -0.96
TCOF1-213ENST00000514442 C9orf129Q5T035 196 aaKnown RBP9.03□□□□□ -0.96
TCOF1-213ENST00000514442 CDH23Q9H251 3354 aa9.02□□□□□ -0.97
TCOF1-213ENST00000514442 SMIM29Q86T20 159 aa9.02□□□□□ -0.97
TCOF1-213ENST00000514442 LINC00208Q96KT6 92 aa9.02□□□□□ -0.97
TCOF1-213ENST00000514442 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
TCOF1-213ENST00000514442 A0A096LNT2 108 aa9.01□□□□□ -0.97
TCOF1-213ENST00000514442 LIMD2Q9BT23 127 aa9.01□□□□□ -0.97
TCOF1-213ENST00000514442 REG3GQ6UW15 175 aa9□□□□□ -0.97
TCOF1-213ENST00000514442 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
TCOF1-213ENST00000514442 MUC4Q99102 2169 aa8.99□□□□□ -0.97
TCOF1-213ENST00000514442 C1orf137Q5JT78 98 aa8.99□□□□□ -0.97
TCOF1-213ENST00000514442 IGLV5-52A0A0A0MRZ9 124 aa8.98□□□□□ -0.97
TCOF1-213ENST00000514442 ZNF706Q9Y5V0 76 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-213ENST00000514442 C10orf25Q5T742 122 aa8.98□□□□□ -0.97
TCOF1-213ENST00000514442 XIRP2A4UGR9 3374 aa8.97□□□□□ -0.97
TCOF1-213ENST00000514442 CD164Q04900 197 aa8.97□□□□□ -0.97
TCOF1-213ENST00000514442 CFAP54Q96N23 3096 aa8.97□□□□□ -0.97
TCOF1-213ENST00000514442 hDV103S1A0JD37 113 aa8.96□□□□□ -0.97
TCOF1-213ENST00000514442 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
TCOF1-213ENST00000514442 MGAQ8IWI9 3026 aa8.95□□□□□ -0.98
TCOF1-213ENST00000514442 Q8NAQ8 132 aa8.95□□□□□ -0.98
TCOF1-213ENST00000514442 OXTP01178 125 aa8.94□□□□□ -0.98
TCOF1-213ENST00000514442 LINC01556Q5JQF7 62 aa8.94□□□□□ -0.98
TCOF1-213ENST00000514442 C1orf134Q5TEV5 83 aa8.93□□□□□ -0.98
TCOF1-213ENST00000514442 WDFY4Q6ZS81 3184 aa8.93□□□□□ -0.98
TCOF1-213ENST00000514442 MDFIQ99750 246 aa8.92□□□□□ -0.98
TCOF1-213ENST00000514442 LINC00167Q96N53 147 aa8.92□□□□□ -0.98
TCOF1-213ENST00000514442 PRLHP81277 87 aa8.92□□□□□ -0.98
TCOF1-213ENST00000514442 CENPEQ02224 2701 aa8.92□□□□□ -0.98
TCOF1-213ENST00000514442 H0Y9P7 68 aa8.91□□□□□ -0.98
TCOF1-213ENST00000514442 PRR15Q8IV56 129 aa8.91□□□□□ -0.98
TCOF1-213ENST00000514442 C6orf48Q9UBA6 75 aa8.91□□□□□ -0.98
TCOF1-213ENST00000514442 CASC2Q6XLA1 102 aa8.9□□□□□ -0.98
TCOF1-213ENST00000514442 TRIOO75962 3097 aa8.9□□□□□ -0.99
TCOF1-213ENST00000514442 KRTAP10-3P60369 221 aa8.89□□□□□ -0.99
TCOF1-213ENST00000514442 C22orf24Q9Y442 160 aa8.89□□□□□ -0.99
TCOF1-213ENST00000514442 ELOF1P60002 83 aaKnown RBP8.89□□□□□ -0.99
TCOF1-213ENST00000514442 CIRBP-AS1Q8TBR5 109 aa8.89□□□□□ -0.99
TCOF1-213ENST00000514442 FLNAP21333 2647 aaKnown RBP8.89□□□□□ -0.99
TCOF1-213ENST00000514442 A8MUN3 132 aa8.88□□□□□ -0.99
TCOF1-213ENST00000514442 Q9BRP9 147 aa8.88□□□□□ -0.99
TCOF1-213ENST00000514442 KRTAP1-3Q8IUG1 177 aa8.88□□□□□ -0.99
TCOF1-213ENST00000514442 A0A1B0GW54 56 aa8.87□□□□□ -0.99
TCOF1-213ENST00000514442 ZNF292O60281 2723 aa8.87□□□□□ -0.99
TCOF1-213ENST00000514442 FP248Q71RG6 208 aaPredicted RBP8.87□□□□□ -0.99
TCOF1-213ENST00000514442 C1orf64Q8NEQ6 169 aa8.86□□□□□ -0.99
TCOF1-213ENST00000514442 CSNK1G2-AS1Q8NCQ2 148 aa8.86□□□□□ -0.99
TCOF1-213ENST00000514442 DEFB116Q30KQ4 102 aa8.86□□□□□ -0.99
TCOF1-213ENST00000514442 FAM104AQ969W3 186 aa8.85□□□□□ -0.99
TCOF1-213ENST00000514442 KIAA0087Q14695 138 aa8.85□□□□□ -0.99
TCOF1-213ENST00000514442 TRAV22A0A0B4J277 110 aa8.84□□□□□ -0.99
TCOF1-213ENST00000514442 TRBV7-4A0A0J9YYF1 115 aa8.84□□□□□ -0.99
TCOF1-213ENST00000514442 H3BNG1 76 aa8.84□□□□□ -0.99
TCOF1-213ENST00000514442 LINC00588Q9Y4M8 146 aa8.84□□□□□ -0.99
TCOF1-213ENST00000514442 KRTAP10-11P60412 298 aa8.84□□□□□ -0.99
TCOF1-213ENST00000514442 A0A087WSZ3 146 aa8.84□□□□□ -0.99
TCOF1-213ENST00000514442 USP24Q9UPU5 2620 aa8.84□□□□□ -0.99
TCOF1-213ENST00000514442 ITPR3Q14573 2671 aa8.84□□□□□ -0.99
TCOF1-213ENST00000514442 K7ERS5 55 aa8.83□□□□□ -1
TCOF1-213ENST00000514442 IGLV6-57P01721 117 aa8.83□□□□□ -1
TCOF1-213ENST00000514442 SZT2Q5T011 3432 aa8.83□□□□□ -1
TCOF1-213ENST00000514442 KTN1-AS1Q86SY8 53 aa8.82□□□□□ -1
TCOF1-213ENST00000514442 GIG44P09565 113 aaPredicted RBP8.82□□□□□ -1
TCOF1-213ENST00000514442 CFAP46Q8IYW2 2715 aa8.81□□□□□ -1
TCOF1-213ENST00000514442 MGAM2Q2M2H8 2515 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms