RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 HIST1H2BHQ93079 126 aa9.24□□□□□ -0.93
DDR1-269ENST00000512725 HIST1H2BNQ99877 126 aa9.24□□□□□ -0.93
DDR1-269ENST00000512725 HIST1H2BMQ99879 126 aa9.24□□□□□ -0.93
DDR1-269ENST00000512725 H3BRM9 83 aa9.23□□□□□ -0.93
DDR1-269ENST00000512725 LEPROTL1O95214 131 aa9.23□□□□□ -0.93
DDR1-269ENST00000512725 UBE2AP49459 152 aa9.23□□□□□ -0.93
DDR1-269ENST00000512725 PPDPFQ9H3Y8 114 aa9.23□□□□□ -0.93
DDR1-269ENST00000512725 TRAV12-1A0A0B4J245 112 aa9.22□□□□□ -0.93
DDR1-269ENST00000512725 GAGE10A6NGK3 116 aa9.22□□□□□ -0.93
DDR1-269ENST00000512725 FAM19A2Q8N3H0 131 aa9.22□□□□□ -0.93
DDR1-269ENST00000512725 IGLC3P0DOY3 106 aa9.21□□□□□ -0.94
DDR1-269ENST00000512725 CDKN2A-AS1Q9UH64 79 aa9.21□□□□□ -0.94
DDR1-269ENST00000512725 FSIP2Q5CZC0 6907 aa9.2□□□□□ -0.94
DDR1-269ENST00000512725 IGLV5-45A0A087WSX0 123 aa9.2□□□□□ -0.94
DDR1-269ENST00000512725 LINC00167Q96N53 147 aa9.2□□□□□ -0.94
DDR1-269ENST00000512725 TP73-AS1Q9UF72 201 aa9.2□□□□□ -0.94
DDR1-269ENST00000512725 CHTOPQ9Y3Y2 248 aaKnown RBP9.2□□□□□ -0.94
DDR1-269ENST00000512725 LINC00310P59036 64 aa9.19□□□□□ -0.94
DDR1-269ENST00000512725 LINC00337Q8N6G1 96 aa9.19□□□□□ -0.94
DDR1-269ENST00000512725 FAM229BQ4G0N7 80 aa9.18□□□□□ -0.94
DDR1-269ENST00000512725 COA6Q5JTJ3 125 aaKnown RBP9.18□□□□□ -0.94
DDR1-269ENST00000512725 Q8IZM0 81 aa9.18□□□□□ -0.94
DDR1-269ENST00000512725 CXCL5P42830 114 aa9.17□□□□□ -0.94
DDR1-269ENST00000512725 MAP1LC3CQ9BXW4 147 aa9.17□□□□□ -0.94
DDR1-269ENST00000512725 F8VRH5 84 aa9.16□□□□□ -0.94
DDR1-269ENST00000512725 FABP4P15090 132 aa9.16□□□□□ -0.94
DDR1-269ENST00000512725 SMIM1B2RUZ4 78 aa9.15□□□□□ -0.94
DDR1-269ENST00000512725 TMEM170BQ5T4T1 132 aa9.15□□□□□ -0.94
DDR1-269ENST00000512725 NKAPP1Q8N9T2 125 aa9.14□□□□□ -0.95
DDR1-269ENST00000512725 C11orf86A6NJI1 115 aa9.13□□□□□ -0.95
DDR1-269ENST00000512725 ZNF22P17026 224 aaPredicted RBP9.13□□□□□ -0.95
DDR1-269ENST00000512725 PLNP26678 52 aa9.13□□□□□ -0.95
DDR1-269ENST00000512725 SFTA2Q6UW10 78 aa9.13□□□□□ -0.95
DDR1-269ENST00000512725 COX7B2Q8TF08 81 aa9.13□□□□□ -0.95
DDR1-269ENST00000512725 IGKV2-28A0A075B6P5 120 aa9.12□□□□□ -0.95
DDR1-269ENST00000512725 H0Y8G0 127 aa9.12□□□□□ -0.95
DDR1-269ENST00000512725 IGKV2D-28P01615 120 aa9.12□□□□□ -0.95
DDR1-269ENST00000512725 SPINK8P0C7L1 97 aa9.12□□□□□ -0.95
DDR1-269ENST00000512725 S100A6P06703 90 aa9.11□□□□□ -0.95
DDR1-269ENST00000512725 PRLHP81277 87 aa9.11□□□□□ -0.95
DDR1-269ENST00000512725 KRTAP13-1Q8IUC0 172 aa9.11□□□□□ -0.95
DDR1-269ENST00000512725 C3orf22Q8N5N4 141 aa9.11□□□□□ -0.95
DDR1-269ENST00000512725 IGLV5-39A0A0G2JS06 123 aa9.1□□□□□ -0.95
DDR1-269ENST00000512725 FAM19A1Q7Z5A9 133 aa9.1□□□□□ -0.95
DDR1-269ENST00000512725 DPM2O94777 84 aa9.09□□□□□ -0.95
DDR1-269ENST00000512725 ASB16-AS1Q495Z4 193 aa9.09□□□□□ -0.95
DDR1-269ENST00000512725 C4orf48Q5BLP8 95 aa9.09□□□□□ -0.95
DDR1-269ENST00000512725 SYS1-DBNDD2H3BUS1 97 aa9.08□□□□□ -0.96
DDR1-269ENST00000512725 HERVK_113P61574 105 aa9.08□□□□□ -0.96
DDR1-269ENST00000512725 CTAG1AP78358 180 aa9.08□□□□□ -0.96
DDR1-269ENST00000512725 PET117Q6UWS5 81 aa9.08□□□□□ -0.96
DDR1-269ENST00000512725 KRTAP4-1Q9BYQ7 146 aa9.08□□□□□ -0.96
DDR1-269ENST00000512725 TMEM223A0PJW6 202 aa9.07□□□□□ -0.96
DDR1-269ENST00000512725 IGKCP01834 107 aa9.07□□□□□ -0.96
DDR1-269ENST00000512725 S100A2P29034 98 aa9.07□□□□□ -0.96
DDR1-269ENST00000512725 AKR1D1P51857 326 aa9.07□□□□□ -0.96
DDR1-269ENST00000512725 SEC61BP60468 96 aaKnown RBP9.07□□□□□ -0.96
DDR1-269ENST00000512725 FP248Q71RG6 208 aaPredicted RBP9.07□□□□□ -0.96
DDR1-269ENST00000512725 SPAG11AQ6PDA7 123 aa9.06□□□□□ -0.96
DDR1-269ENST00000512725 C20orf202A1L168 122 aa9.05□□□□□ -0.96
DDR1-269ENST00000512725 KRTAP13-3Q3SY46 172 aa9.05□□□□□ -0.96
DDR1-269ENST00000512725 IGLV5-37A0A075B6J1 123 aa9.03□□□□□ -0.96
DDR1-269ENST00000512725 LINC00587B1AMM8 73 aa9.03□□□□□ -0.96
DDR1-269ENST00000512725 TMEM238C9JI98 176 aa9.03□□□□□ -0.96
DDR1-269ENST00000512725 KRTDAPP60985 99 aa9.03□□□□□ -0.96
DDR1-269ENST00000512725 COX17Q14061 63 aa9.03□□□□□ -0.96
DDR1-269ENST00000512725 LINC01545Q5VT33 79 aa9.03□□□□□ -0.96
DDR1-269ENST00000512725 PLEKHB2Q96CS7 222 aa9.03□□□□□ -0.96
DDR1-269ENST00000512725 C3orf79P0CE67 100 aa9.02□□□□□ -0.97
DDR1-269ENST00000512725 HERV-K104P63124 156 aa9.02□□□□□ -0.97
DDR1-269ENST00000512725 HIGD2AQ9BW72 106 aa9.02□□□□□ -0.97
DDR1-269ENST00000512725 TMEM126AQ9H061 195 aa9.02□□□□□ -0.97
DDR1-269ENST00000512725 LEPROTO15243 131 aa9.01□□□□□ -0.97
DDR1-269ENST00000512725 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
DDR1-269ENST00000512725 PMCHL2Q9BQD1 86 aa9.01□□□□□ -0.97
DDR1-269ENST00000512725 MYMXA0A1B0GTQ4 84 aa9□□□□□ -0.97
DDR1-269ENST00000512725 DAND5Q8N907 189 aa9□□□□□ -0.97
DDR1-269ENST00000512725 NMUP48645 174 aa8.99□□□□□ -0.97
DDR1-269ENST00000512725 ZNF625Q96I27 306 aaPredicted RBP8.99□□□□□ -0.97
DDR1-269ENST00000512725 ERG28Q9UKR5 140 aa8.99□□□□□ -0.97
DDR1-269ENST00000512725 LGALS3P17931 250 aaKnown RBP8.98□□□□□ -0.97
DDR1-269ENST00000512725 PFN2P35080 140 aa8.98□□□□□ -0.97
DDR1-269ENST00000512725 Q8NBF4 154 aa8.98□□□□□ -0.97
DDR1-269ENST00000512725 HIST1H2BLQ99880 126 aa8.98□□□□□ -0.97
DDR1-269ENST00000512725 NDUFA12Q9UI09 145 aa8.98□□□□□ -0.97
DDR1-269ENST00000512725 E9PLD3 99 aa8.97□□□□□ -0.97
DDR1-269ENST00000512725 J3QQQ9 107 aa8.97□□□□□ -0.97
DDR1-269ENST00000512725 SNRPEP62304 92 aaKnown RBP8.97□□□□□ -0.97
DDR1-269ENST00000512725 C5orf52A6NGY3 159 aa8.96□□□□□ -0.98
DDR1-269ENST00000512725 M0R378 163 aa8.96□□□□□ -0.98
DDR1-269ENST00000512725 LINC00158P58513 81 aa8.95□□□□□ -0.98
DDR1-269ENST00000512725 MEIG1Q5JSS6 88 aa8.95□□□□□ -0.98
DDR1-269ENST00000512725 SPRR4Q96PI1 79 aa8.94□□□□□ -0.98
DDR1-269ENST00000512725 VPREB1P12018 145 aa8.93□□□□□ -0.98
DDR1-269ENST00000512725 RPL24P83731 157 aaKnown RBP8.93□□□□□ -0.98
DDR1-269ENST00000512725 ZNF706Q9Y5V0 76 aaPredicted RBP8.92□□□□□ -0.98
DDR1-269ENST00000512725 SPINK1P00995 79 aa8.91□□□□□ -0.98
DDR1-269ENST00000512725 SND1-IT1Q9HBX3 110 aa8.91□□□□□ -0.98
DDR1-269ENST00000512725 HSBP1L1C9JCN9 74 aa8.9□□□□□ -0.98
DDR1-269ENST00000512725 TSPEAR-AS2P59090 65 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms