RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 PDE6HQ13956 83 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 SPATA8Q6RVD6 105 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 C9orf163Q8N9P6 203 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 ZNF625Q96I27 306 aaPredicted RBP2.78□□□□□ -1.96
NIPBL-206ENST00000509429 GAFA1Q96PS6 74 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 DOCK10Q96BY6 2186 aa2.78□□□□□ -1.96
NIPBL-206ENST00000509429 FREM1Q5H8C1 2179 aa2.77□□□□□ -1.97
NIPBL-206ENST00000509429 CR1P17927 2039 aa2.77□□□□□ -1.97
NIPBL-206ENST00000509429 H0YGX0 51 aa2.77□□□□□ -1.97
NIPBL-206ENST00000509429 GIG44P09565 113 aaPredicted RBP2.77□□□□□ -1.97
NIPBL-206ENST00000509429 C14orf177Q52M58 125 aa2.77□□□□□ -1.97
NIPBL-206ENST00000509429 C16orf74Q96GX8 76 aa2.77□□□□□ -1.97
NIPBL-206ENST00000509429 PRRC2AP48634 2157 aaKnown RBP2.77□□□□□ -1.97
NIPBL-206ENST00000509429 ARFGEF3Q5TH69 2177 aa2.77□□□□□ -1.97
NIPBL-206ENST00000509429 TRIOBPQ9H2D6 2365 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 A0A1B0GU33 70 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 H3BRN7 92 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 WT1-ASQ06250 92 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 Q5W150 140 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 LINC00322Q6ZN03 302 aaPredicted RBP2.76□□□□□ -1.97
NIPBL-206ENST00000509429 LEAP2Q969E1 77 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 SPRR4Q96PI1 79 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 RNF5Q99942 180 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 WFDC10AQ9H1F0 79 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 KLK12Q9UKR0 248 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 DNAH14Q0VDD8 3507 aa2.76□□□□□ -1.97
NIPBL-206ENST00000509429 XIRP2A4UGR9 3374 aa2.75□□□□□ -1.97
NIPBL-206ENST00000509429 RTTNQ86VV8 2226 aa2.75□□□□□ -1.97
NIPBL-206ENST00000509429 H0Y9P7 68 aa2.75□□□□□ -1.97
NIPBL-206ENST00000509429 CCL18P55774 89 aa2.75□□□□□ -1.97
NIPBL-206ENST00000509429 KRTAP5-7Q6L8G8 165 aa2.75□□□□□ -1.97
NIPBL-206ENST00000509429 KAAG1Q9UBP8 84 aa2.75□□□□□ -1.97
NIPBL-206ENST00000509429 SPTBN5Q9NRC6 3674 aaKnown RBP2.74□□□□□ -1.97
NIPBL-206ENST00000509429 CEP290O15078 2479 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 UQCR11O14957 56 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 IGLV7-43P04211 117 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 CCL3L1P16619 93 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 C10orf55Q5SWW7 151 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 LITAFQ99732 161 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 CNFNQ9BYD5 112 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 CUL9Q8IWT3 2517 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 SZT2Q5T011 3432 aa2.74□□□□□ -1.97
NIPBL-206ENST00000509429 LOC110117498A0A087WWA1 95 aa2.73□□□□□ -1.97
NIPBL-206ENST00000509429 ZNF861PO60384 105 aa2.73□□□□□ -1.97
NIPBL-206ENST00000509429 MGPP08493 103 aa2.73□□□□□ -1.97
NIPBL-206ENST00000509429 NDPQ00604 133 aa2.73□□□□□ -1.97
NIPBL-206ENST00000509429 DEFB114Q30KQ6 69 aa2.73□□□□□ -1.97
NIPBL-206ENST00000509429 DEFB108BQ8NET1 73 aa2.73□□□□□ -1.97
NIPBL-206ENST00000509429 KLK9Q9UKQ9 250 aa2.73□□□□□ -1.97
NIPBL-206ENST00000509429 I3L2K1 104 aa2.72□□□□□ -1.97
NIPBL-206ENST00000509429 RNASE3P12724 160 aaKnown RBP2.72□□□□□ -1.97
NIPBL-206ENST00000509429 HAMPP81172 84 aa2.72□□□□□ -1.97
NIPBL-206ENST00000509429 PRR14LQ5THK1 2151 aa2.72□□□□□ -1.97
NIPBL-206ENST00000509429 CNTRLQ7Z7A1 2325 aa2.72□□□□□ -1.97
NIPBL-206ENST00000509429 ABCA4P78363 2273 aa2.72□□□□□ -1.97
NIPBL-206ENST00000509429 RANBP2P49792 3224 aaKnown RBP2.72□□□□□ -1.97
NIPBL-206ENST00000509429 WDR87Q6ZQQ6 2873 aa2.71□□□□□ -1.97
NIPBL-206ENST00000509429 LAMA1P25391 3075 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 NAV3Q8IVL0 2385 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 IGLV4-69A0A075B6H9 119 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 TRGV4A0A0C4DH28 118 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 IGKV3OR2-268A0A0C4DH90 116 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 LINC00959A0A1B0GUT2 108 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 A0A1W2PPR1 153 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 K7EIM0 57 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 C9orf129Q5T035 196 aaKnown RBP2.71□□□□□ -1.98
NIPBL-206ENST00000509429 PRO3102Q9H379 93 aa2.71□□□□□ -1.98
NIPBL-206ENST00000509429 TNCP24821 2201 aa2.7□□□□□ -1.98
NIPBL-206ENST00000509429 SDK1Q7Z5N4 2213 aa2.7□□□□□ -1.98
NIPBL-206ENST00000509429 NDUFA4O00483 81 aa2.7□□□□□ -1.98
NIPBL-206ENST00000509429 NCR3O14931 201 aa2.7□□□□□ -1.98
NIPBL-206ENST00000509429 KRTAP7-1Q8IUC3 87 aa2.7□□□□□ -1.98
NIPBL-206ENST00000509429 VCANP13611 3396 aa2.7□□□□□ -1.98
NIPBL-206ENST00000509429 TECTAO75443 2155 aa2.7□□□□□ -1.98
NIPBL-206ENST00000509429 IGKV2-40A0A087WW87 121 aaPredicted RBP2.69□□□□□ -1.98
NIPBL-206ENST00000509429 ETDCA0A1B0GVM5 59 aa2.69□□□□□ -1.98
NIPBL-206ENST00000509429 IGKV2D-40P01614 121 aaPredicted RBP2.69□□□□□ -1.98
NIPBL-206ENST00000509429 DEFB109BQ30KR1 87 aa2.69□□□□□ -1.98
NIPBL-206ENST00000509429 MINOS1Q5TGZ0 78 aa2.69□□□□□ -1.98
NIPBL-206ENST00000509429 SMIM2Q9BVW6 85 aa2.69□□□□□ -1.98
NIPBL-206ENST00000509429 AHCTF1Q8WYP5 2266 aa2.68□□□□□ -1.98
NIPBL-206ENST00000509429 CRIP1P50238 77 aa2.68□□□□□ -1.98
NIPBL-206ENST00000509429 KLK9Q2XQG4 91 aa2.68□□□□□ -1.98
NIPBL-206ENST00000509429 DEFB112Q30KQ8 113 aa2.68□□□□□ -1.98
NIPBL-206ENST00000509429 COA5Q86WW8 74 aa2.68□□□□□ -1.98
NIPBL-206ENST00000509429 ST20-AS1Q8NBB2 130 aa2.68□□□□□ -1.98
NIPBL-206ENST00000509429 KCNQ1DNQ9H478 68 aa2.68□□□□□ -1.98
NIPBL-206ENST00000509429 CACNA1DQ01668 2161 aa2.68□□□□□ -1.98
NIPBL-206ENST00000509429 FAM186AA6NE01 2351 aa2.67□□□□□ -1.98
NIPBL-206ENST00000509429 IGKV4-1P06312 121 aa2.67□□□□□ -1.98
NIPBL-206ENST00000509429 APELAP0DMC3 54 aa2.67□□□□□ -1.98
NIPBL-206ENST00000509429 C4orf3Q8WVX3 66 aa2.67□□□□□ -1.98
NIPBL-206ENST00000509429 TRIOO75962 3097 aa2.67□□□□□ -1.98
NIPBL-206ENST00000509429 MYO15AQ9UKN7 3530 aa2.66□□□□□ -1.98
NIPBL-206ENST00000509429 A0A087WTM6 91 aa2.66□□□□□ -1.98
NIPBL-206ENST00000509429 DEFB116Q30KQ4 102 aa2.66□□□□□ -1.98
NIPBL-206ENST00000509429 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.66□□□□□ -1.98
NIPBL-206ENST00000509429 LINC00472Q9H8W2 130 aa2.66□□□□□ -1.98
NIPBL-206ENST00000509429 USP34Q70CQ2 3546 aa2.65□□□□□ -1.98
NIPBL-206ENST00000509429 PLCE1Q9P212 2302 aa2.65□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms