RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 HIST1H2BDP58876 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST1H2BCP62807 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST2H2BEQ16778 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST1H2BHQ93079 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST1H2BNQ99877 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 HIST1H2BMQ99879 126 aa9.72□□□□□ -0.85
PDLIM5-212ENST00000509333 KRTAP1-4P0C5Y4 121 aa9.71□□□□□ -0.86
PDLIM5-212ENST00000509333 VPREB1P12018 145 aa9.71□□□□□ -0.86
PDLIM5-212ENST00000509333 LINC00158P58513 81 aa9.71□□□□□ -0.86
PDLIM5-212ENST00000509333 BCE1O60756 84 aa9.7□□□□□ -0.86
PDLIM5-212ENST00000509333 NKAPP1Q8N9T2 125 aa9.7□□□□□ -0.86
PDLIM5-212ENST00000509333 Q8NDZ9 215 aa9.7□□□□□ -0.86
PDLIM5-212ENST00000509333 A0A0U1RRA0 63 aa9.69□□□□□ -0.86
PDLIM5-212ENST00000509333 RPL24P83731 157 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-212ENST00000509333 PRR26Q8N8Z3 221 aa9.69□□□□□ -0.86
PDLIM5-212ENST00000509333 IGLV1-50A0A075B6I6 118 aa9.68□□□□□ -0.86
PDLIM5-212ENST00000509333 SMIM13P0DJ93 91 aa9.68□□□□□ -0.86
PDLIM5-212ENST00000509333 PLNP26678 52 aa9.68□□□□□ -0.86
PDLIM5-212ENST00000509333 PMCHL2Q9BQD1 86 aa9.68□□□□□ -0.86
PDLIM5-212ENST00000509333 NDUFA12Q9UI09 145 aa9.68□□□□□ -0.86
PDLIM5-212ENST00000509333 LEPROTO15243 131 aa9.67□□□□□ -0.86
PDLIM5-212ENST00000509333 DPM2O94777 84 aa9.67□□□□□ -0.86
PDLIM5-212ENST00000509333 MAP1LC3CQ9BXW4 147 aa9.67□□□□□ -0.86
PDLIM5-212ENST00000509333 MYMXA0A1B0GTQ4 84 aa9.66□□□□□ -0.86
PDLIM5-212ENST00000509333 RPL28P46779 137 aaKnown RBP9.66□□□□□ -0.86
PDLIM5-212ENST00000509333 HERV-K104P63124 156 aa9.66□□□□□ -0.86
PDLIM5-212ENST00000509333 LINC00587B1AMM8 73 aa9.65□□□□□ -0.86
PDLIM5-212ENST00000509333 IGKCP01834 107 aa9.65□□□□□ -0.86
PDLIM5-212ENST00000509333 TSPEAR-AS2P59090 65 aa9.65□□□□□ -0.86
PDLIM5-212ENST00000509333 KRTAP13-1Q8IUC0 172 aa9.65□□□□□ -0.86
PDLIM5-212ENST00000509333 PLEKHB2Q96CS7 222 aa9.65□□□□□ -0.86
PDLIM5-212ENST00000509333 IGKV2-28A0A075B6P5 120 aa9.64□□□□□ -0.87
PDLIM5-212ENST00000509333 IGKV2D-28P01615 120 aa9.64□□□□□ -0.87
PDLIM5-212ENST00000509333 J3QQQ9 107 aa9.63□□□□□ -0.87
PDLIM5-212ENST00000509333 ATP6V1G1O75348 118 aa9.63□□□□□ -0.87
PDLIM5-212ENST00000509333 MEIG1Q5JSS6 88 aa9.63□□□□□ -0.87
PDLIM5-212ENST00000509333 MIR7-3HGQ8N6C7 128 aa9.63□□□□□ -0.87
PDLIM5-212ENST00000509333 SYS1-DBNDD2H3BUS1 97 aa9.62□□□□□ -0.87
PDLIM5-212ENST00000509333 COA6Q5JTJ3 125 aaKnown RBP9.62□□□□□ -0.87
PDLIM5-212ENST00000509333 UBR4Q5T4S7 5183 aa9.62□□□□□ -0.87
PDLIM5-212ENST00000509333 TMEM238C9JI98 176 aa9.61□□□□□ -0.87
PDLIM5-212ENST00000509333 M0R378 163 aa9.61□□□□□ -0.87
PDLIM5-212ENST00000509333 TMEM126AQ9H061 195 aa9.61□□□□□ -0.87
PDLIM5-212ENST00000509333 LOC107984156A0A0G2JMH3 177 aa9.6□□□□□ -0.87
PDLIM5-212ENST00000509333 HERVK_113P61574 105 aa9.6□□□□□ -0.87
PDLIM5-212ENST00000509333 ARL17AQ8IVW1 177 aa9.6□□□□□ -0.87
PDLIM5-212ENST00000509333 BOD1L2Q8IYS8 172 aa9.6□□□□□ -0.87
PDLIM5-212ENST00000509333 UBE2AP49459 152 aa9.59□□□□□ -0.87
PDLIM5-212ENST00000509333 LRP2P98164 4655 aa9.58□□□□□ -0.88
PDLIM5-212ENST00000509333 NMUP48645 174 aa9.58□□□□□ -0.88
PDLIM5-212ENST00000509333 LINC01545Q5VT33 79 aa9.58□□□□□ -0.88
PDLIM5-212ENST00000509333 PET117Q6UWS5 81 aa9.58□□□□□ -0.88
PDLIM5-212ENST00000509333 E9PLD3 99 aa9.57□□□□□ -0.88
PDLIM5-212ENST00000509333 LGALS3P17931 250 aaKnown RBP9.57□□□□□ -0.88
PDLIM5-212ENST00000509333 FAM19A1Q7Z5A9 133 aa9.57□□□□□ -0.88
PDLIM5-212ENST00000509333 LORP23490 312 aaPredicted RBP9.56□□□□□ -0.88
PDLIM5-212ENST00000509333 RPL13AP40429 203 aaKnown RBP9.56□□□□□ -0.88
PDLIM5-212ENST00000509333 DAND5Q8N907 189 aa9.56□□□□□ -0.88
PDLIM5-212ENST00000509333 IGKV2D-26A0A0A0MRZ7 120 aa9.55□□□□□ -0.88
PDLIM5-212ENST00000509333 C3orf79P0CE67 100 aa9.55□□□□□ -0.88
PDLIM5-212ENST00000509333 PRLHP81277 87 aa9.55□□□□□ -0.88
PDLIM5-212ENST00000509333 ANAPC11Q9NYG5 84 aa9.55□□□□□ -0.88
PDLIM5-212ENST00000509333 A0A087X002 238 aa9.54□□□□□ -0.88
PDLIM5-212ENST00000509333 ADAMTSL4-AS1Q5T5F5 129 aa9.54□□□□□ -0.88
PDLIM5-212ENST00000509333 KCNQ1DNQ9H478 68 aa9.54□□□□□ -0.88
PDLIM5-212ENST00000509333 A0A0J9YXY3 114 aa9.53□□□□□ -0.88
PDLIM5-212ENST00000509333 NCR3O14931 201 aa9.52□□□□□ -0.89
PDLIM5-212ENST00000509333 CRYGAP11844 174 aa9.52□□□□□ -0.89
PDLIM5-212ENST00000509333 SPRR1AP35321 89 aa9.52□□□□□ -0.89
PDLIM5-212ENST00000509333 S100A1P23297 94 aa9.51□□□□□ -0.89
PDLIM5-212ENST00000509333 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
PDLIM5-212ENST00000509333 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
PDLIM5-212ENST00000509333 KRTAP4-16G5E9R7 235 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-212ENST00000509333 EIF4EBP3O60516 100 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-212ENST00000509333 FAM229BQ4G0N7 80 aa9.5□□□□□ -0.89
PDLIM5-212ENST00000509333 PRYO14603 147 aa9.49□□□□□ -0.89
PDLIM5-212ENST00000509333 KRTDAPP60985 99 aa9.49□□□□□ -0.89
PDLIM5-212ENST00000509333 KRTAP13-2Q52LG2 175 aa9.49□□□□□ -0.89
PDLIM5-212ENST00000509333 SOSTDC1Q6X4U4 206 aa9.49□□□□□ -0.89
PDLIM5-212ENST00000509333 LINC00337Q8N6G1 96 aa9.49□□□□□ -0.89
PDLIM5-212ENST00000509333 NDUFC2O95298 119 aa9.48□□□□□ -0.89
PDLIM5-212ENST00000509333 TYMSOSQ8TAI1 123 aa9.48□□□□□ -0.89
PDLIM5-212ENST00000509333 LITAFQ99732 161 aa9.47□□□□□ -0.89
PDLIM5-212ENST00000509333 HIGD2AQ9BW72 106 aa9.47□□□□□ -0.89
PDLIM5-212ENST00000509333 DDTP30046 118 aa9.45□□□□□ -0.9
PDLIM5-212ENST00000509333 SMCR5Q8TEV8 140 aa9.45□□□□□ -0.9
PDLIM5-212ENST00000509333 MIEN1Q9BRT3 115 aa9.45□□□□□ -0.9
PDLIM5-212ENST00000509333 TTTY13Q9BZ97 58 aa9.45□□□□□ -0.9
PDLIM5-212ENST00000509333 TIMM17BO60830 172 aa9.44□□□□□ -0.9
PDLIM5-212ENST00000509333 IGLV6-57P01721 117 aa9.44□□□□□ -0.9
PDLIM5-212ENST00000509333 NPC2P61916 151 aa9.44□□□□□ -0.9
PDLIM5-212ENST00000509333 SPANXB1Q9NS25 103 aaPredicted RBP9.44□□□□□ -0.9
PDLIM5-212ENST00000509333 LPAP08519 4548 aa9.44□□□□□ -0.9
PDLIM5-212ENST00000509333 ETDCA0A1B0GVM5 59 aa9.43□□□□□ -0.9
PDLIM5-212ENST00000509333 ZNF815PA8K554 130 aa9.43□□□□□ -0.9
PDLIM5-212ENST00000509333 B5MCH6 92 aa9.43□□□□□ -0.9
PDLIM5-212ENST00000509333 TSPAN13O95857 204 aa9.43□□□□□ -0.9
PDLIM5-212ENST00000509333 LINC00308Q8TCZ7 52 aa9.43□□□□□ -0.9
PDLIM5-212ENST00000509333 SPRR4Q96PI1 79 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 122.9 ms