RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 IGLV2-8P01709 118 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 ACYP1P07311 99 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 LGALS9BQ3B8N2 356 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 TMEM170BQ5T4T1 132 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 LGALS9CQ6DKI2 356 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 CEMP1Q6PRD7 247 aaPredicted RBP3.25□□□□□ -1.89
NIPBL-205ENST00000505998 DAZ4Q86SG3 579 aaKnown RBP3.25□□□□□ -1.89
NIPBL-205ENST00000505998 Q86TA4 180 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 HHLA3Q9XRX5 114 aa3.25□□□□□ -1.89
NIPBL-205ENST00000505998 IGKV3-7A0A075B6H7 116 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 IGKV2-40A0A087WW87 121 aaPredicted RBP3.24□□□□□ -1.89
NIPBL-205ENST00000505998 K7ERJ3 54 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 BPY2O14599 106 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 IGKV2D-40P01614 121 aaPredicted RBP3.24□□□□□ -1.89
NIPBL-205ENST00000505998 ATP5EP56381 51 aaPredicted RBP3.24□□□□□ -1.89
NIPBL-205ENST00000505998 DEFB1P60022 68 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 UBE2D3P61077 147 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 UBE2D2P62837 147 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 RBMY1FQ15415 496 aaKnown RBP3.24□□□□□ -1.89
NIPBL-205ENST00000505998 PRR9Q5T870 116 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
NIPBL-205ENST00000505998 C11orf68Q9H3H3 251 aaKnown RBP3.24□□□□□ -1.89
NIPBL-205ENST00000505998 DPH3P1Q9H4G8 78 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 TGP01266 2768 aa3.24□□□□□ -1.89
NIPBL-205ENST00000505998 IGHV3OR16-9A0A0B4J2B5 98 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 C19orf71A6NCJ1 209 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 NPYP01303 97 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 HIST1H4AP62805 103 aaKnown RBP3.23□□□□□ -1.89
NIPBL-205ENST00000505998 SCGB1D4Q6XE38 83 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 ATP5L2Q7Z4Y8 100 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 SERP2Q8N6R1 65 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 Q8NAQ8 132 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 UPK3BQ9BT76 320 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 CNFNQ9BYD5 112 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 NXT2Q9NPJ8 142 aaKnown RBP3.23□□□□□ -1.89
NIPBL-205ENST00000505998 OSTCQ9NRP0 149 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 DNAH6Q9C0G6 4158 aa3.23□□□□□ -1.89
NIPBL-205ENST00000505998 STARD9Q9P2P6 4700 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 MYMXA0A1B0GTQ4 84 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 SLC25A20O43772 301 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 MGST1P10620 155 aaKnown RBP3.22□□□□□ -1.89
NIPBL-205ENST00000505998 PSMB2P49721 201 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 CRIP1P50238 77 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 ZNF80P51504 273 aaPredicted RBP3.22□□□□□ -1.89
NIPBL-205ENST00000505998 SYCNQ0VAF6 134 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 SPINK13Q1W4C9 94 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 CENPWQ5EE01 88 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 Q5W150 140 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 NTM-AS1Q6ZSK4 140 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 LINC00643Q86TS7 51 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 C11orf72Q8NBR9 251 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 Q8TAT8 98 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 UBE2WQ96B02 151 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 RBM12B-AS1Q9P1G2 102 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 V9GYV3 84 aa3.22□□□□□ -1.89
NIPBL-205ENST00000505998 TRAV21A0A0B4J279 112 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 IGHV1-58A0A0C4DH39 117 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 A0A0J9YXV3 536 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 SMIM27A0A1W2PRY6 76 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 MIFP14174 115 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 DEFB121Q5J5C9 76 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 C5orf38Q86SI9 138 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 KTN1-AS1Q86SY8 53 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 TMEM263Q8WUH6 116 aaKnown RBP3.21□□□□□ -1.9
NIPBL-205ENST00000505998 IFI27L1Q96BM0 104 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
NIPBL-205ENST00000505998 DNAH1Q9P2D7 4330 aa3.2□□□□□ -1.9
NIPBL-205ENST00000505998 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
NIPBL-205ENST00000505998 NDUFS5O43920 106 aa3.2□□□□□ -1.9
NIPBL-205ENST00000505998 RNASE3P12724 160 aaKnown RBP3.2□□□□□ -1.9
NIPBL-205ENST00000505998 LGALS3P17931 250 aaKnown RBP3.2□□□□□ -1.9
NIPBL-205ENST00000505998 MOBPQ13875 183 aa3.2□□□□□ -1.9
NIPBL-205ENST00000505998 ZNF56Q15929 161 aa3.2□□□□□ -1.9
NIPBL-205ENST00000505998 DEFB135Q30KP9 77 aa3.2□□□□□ -1.9
NIPBL-205ENST00000505998 PP632Q6XCG6 107 aa3.2□□□□□ -1.9
NIPBL-205ENST00000505998 LYSTQ99698 3801 aa3.2□□□□□ -1.9
NIPBL-205ENST00000505998 ALMS1Q8TCU4 4167 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 TRBV25-1A0A075B6N4 114 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 C8orf87E5RJ46 101 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 H3BVH4 76 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 SPINK4O60575 86 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 SH2D1AO60880 128 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 HBDP02042 147 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 FAM104BQ5XKR9 115 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 PRNTQ86SH4 94 aa3.19□□□□□ -1.9
NIPBL-205ENST00000505998 PLECQ15149 4684 aaKnown RBP3.18□□□□□ -1.9
NIPBL-205ENST00000505998 TRBV7-3A0A075B6L6 115 aa3.18□□□□□ -1.9
NIPBL-205ENST00000505998 TRAV12-3A0A0B4J271 114 aa3.18□□□□□ -1.9
NIPBL-205ENST00000505998 LOC107984156A0A0G2JMH3 177 aa3.18□□□□□ -1.9
NIPBL-205ENST00000505998 DAD1P61803 113 aa3.18□□□□□ -1.9
NIPBL-205ENST00000505998 CACNG7P62955 275 aa3.18□□□□□ -1.9
NIPBL-205ENST00000505998 FP248Q71RG6 208 aaPredicted RBP3.18□□□□□ -1.9
NIPBL-205ENST00000505998 ARL17AQ8IVW1 177 aa3.18□□□□□ -1.9
NIPBL-205ENST00000505998 TMEM243Q9BU79 118 aa3.18□□□□□ -1.9
NIPBL-205ENST00000505998 VPS13DQ5THJ4 4388 aa3.17□□□□□ -1.9
NIPBL-205ENST00000505998 TMSB15BA0A087X1C1 80 aa3.17□□□□□ -1.9
NIPBL-205ENST00000505998 TRBV10-2A0A0K0K1G8 114 aa3.17□□□□□ -1.9
NIPBL-205ENST00000505998 PRB4P10163 310 aaPredicted RBP3.17□□□□□ -1.9
NIPBL-205ENST00000505998 RNASE4P34096 147 aaKnown RBP3.17□□□□□ -1.9
NIPBL-205ENST00000505998 UBE2D1P51668 147 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 517.7 ms