RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 ATOH7Q8N100 152 aa10.3□□□□□ -0.76
SCLT1-205ENST00000503401 LGALS3P17931 250 aaKnown RBP10.29□□□□□ -0.76
SCLT1-205ENST00000503401 LINC00587B1AMM8 73 aa10.29□□□□□ -0.76
SCLT1-205ENST00000503401 E9PLD3 99 aa10.29□□□□□ -0.76
SCLT1-205ENST00000503401 LINC00158P58513 81 aa10.29□□□□□ -0.76
SCLT1-205ENST00000503401 PKHD1L1Q86WI1 4243 aa10.29□□□□□ -0.76
SCLT1-205ENST00000503401 MYMXA0A1B0GTQ4 84 aa10.28□□□□□ -0.76
SCLT1-205ENST00000503401 M0QXV9 152 aa10.28□□□□□ -0.76
SCLT1-205ENST00000503401 SMIM13P0DJ93 91 aa10.28□□□□□ -0.76
SCLT1-205ENST00000503401 COX17Q14061 63 aa10.28□□□□□ -0.76
SCLT1-205ENST00000503401 MEIG1Q5JSS6 88 aa10.28□□□□□ -0.76
SCLT1-205ENST00000503401 MYCBP2O75592 4640 aa10.27□□□□□ -0.77
SCLT1-205ENST00000503401 HERV-K104P63124 156 aa10.27□□□□□ -0.77
SCLT1-205ENST00000503401 SND1-IT1Q9HBX3 110 aa10.27□□□□□ -0.77
SCLT1-205ENST00000503401 IGKV2D-26A0A0A0MRZ7 120 aa10.26□□□□□ -0.77
SCLT1-205ENST00000503401 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
SCLT1-205ENST00000503401 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
SCLT1-205ENST00000503401 C22orf24Q9Y442 160 aa10.25□□□□□ -0.77
SCLT1-205ENST00000503401 INAFM2P0DMQ5 153 aa10.24□□□□□ -0.77
SCLT1-205ENST00000503401 NMUP48645 174 aa10.24□□□□□ -0.77
SCLT1-205ENST00000503401 PRR3P79522 188 aaKnown RBP10.24□□□□□ -0.77
SCLT1-205ENST00000503401 LBHQ53QV2 105 aaPredicted RBP10.24□□□□□ -0.77
SCLT1-205ENST00000503401 TTTY13Q9BZ97 58 aa10.24□□□□□ -0.77
SCLT1-205ENST00000503401 HNRNPA3P51991 378 aaKnown RBP10.23□□□□□ -0.77
SCLT1-205ENST00000503401 ANKRD39Q53RE8 183 aa10.23□□□□□ -0.77
SCLT1-205ENST00000503401 MIR7-3HGQ8N6C7 128 aa10.23□□□□□ -0.77
SCLT1-205ENST00000503401 VAMP8Q9BV40 100 aa10.23□□□□□ -0.77
SCLT1-205ENST00000503401 DAND5Q8N907 189 aa10.22□□□□□ -0.77
SCLT1-205ENST00000503401 Q8NDZ9 215 aa10.22□□□□□ -0.77
SCLT1-205ENST00000503401 PSORS1C2Q9UIG4 136 aa10.22□□□□□ -0.77
SCLT1-205ENST00000503401 PAM16Q9Y3D7 125 aa10.22□□□□□ -0.77
SCLT1-205ENST00000503401 UBE2BP63146 152 aa10.21□□□□□ -0.78
SCLT1-205ENST00000503401 PLA2G2DQ9UNK4 145 aa10.21□□□□□ -0.78
SCLT1-205ENST00000503401 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.78
SCLT1-205ENST00000503401 A0A0J9YXY3 114 aa10.2□□□□□ -0.78
SCLT1-205ENST00000503401 GAGE10A6NGK3 116 aa10.19□□□□□ -0.78
SCLT1-205ENST00000503401 ZNF815PA8K554 130 aa10.19□□□□□ -0.78
SCLT1-205ENST00000503401 SPATA45Q537H7 98 aa10.19□□□□□ -0.78
SCLT1-205ENST00000503401 MRPL55Q7Z7F7 128 aaKnown RBP10.19□□□□□ -0.78
SCLT1-205ENST00000503401 HSBP1L1C9JCN9 74 aa10.18□□□□□ -0.78
SCLT1-205ENST00000503401 VPREB1P12018 145 aa10.18□□□□□ -0.78
SCLT1-205ENST00000503401 NKAPP1Q8N9T2 125 aa10.18□□□□□ -0.78
SCLT1-205ENST00000503401 FAT3Q8TDW7 4589 aa10.18□□□□□ -0.78
SCLT1-205ENST00000503401 RPL37AP8A6NKH3 93 aa10.18□□□□□ -0.78
SCLT1-205ENST00000503401 C1orf137Q5JT78 98 aa10.18□□□□□ -0.78
SCLT1-205ENST00000503401 LINC00167Q96N53 147 aa10.18□□□□□ -0.78
SCLT1-205ENST00000503401 TP73-AS1Q9UF72 201 aa10.18□□□□□ -0.78
SCLT1-205ENST00000503401 IGLV5-37A0A075B6J1 123 aa10.17□□□□□ -0.78
SCLT1-205ENST00000503401 ADAMTSL4-AS1Q5T5F5 129 aa10.17□□□□□ -0.78
SCLT1-205ENST00000503401 BOD1L2Q8IYS8 172 aa10.16□□□□□ -0.78
SCLT1-205ENST00000503401 RPL24P83731 157 aaKnown RBP10.15□□□□□ -0.78
SCLT1-205ENST00000503401 PCP2Q8IVA1 136 aa10.15□□□□□ -0.78
SCLT1-205ENST00000503401 NPC2P61916 151 aa10.15□□□□□ -0.79
SCLT1-205ENST00000503401 COX8AP10176 69 aa10.14□□□□□ -0.79
SCLT1-205ENST00000503401 TSTD3H0UI37 97 aa10.13□□□□□ -0.79
SCLT1-205ENST00000503401 LITAFQ99732 161 aa10.13□□□□□ -0.79
SCLT1-205ENST00000503401 IGKV2-28A0A075B6P5 120 aa10.12□□□□□ -0.79
SCLT1-205ENST00000503401 DLEU1O43261 78 aa10.12□□□□□ -0.79
SCLT1-205ENST00000503401 EIF4EBP3O60516 100 aaPredicted RBP10.12□□□□□ -0.79
SCLT1-205ENST00000503401 IGKV2D-28P01615 120 aa10.12□□□□□ -0.79
SCLT1-205ENST00000503401 C14orf144Q96I85 54 aa10.12□□□□□ -0.79
SCLT1-205ENST00000503401 NCR3O14931 201 aa10.11□□□□□ -0.79
SCLT1-205ENST00000503401 SOSTDC1Q6X4U4 206 aa10.11□□□□□ -0.79
SCLT1-205ENST00000503401 SCGB1D4Q6XE38 83 aa10.11□□□□□ -0.79
SCLT1-205ENST00000503401 MIEN1Q9BRT3 115 aa10.11□□□□□ -0.79
SCLT1-205ENST00000503401 PRO1933Q9H354 126 aa10.11□□□□□ -0.79
SCLT1-205ENST00000503401 IGLV7-43P04211 117 aa10.1□□□□□ -0.79
SCLT1-205ENST00000503401 LOC107984156A0A0G2JMH3 177 aa10.09□□□□□ -0.79
SCLT1-205ENST00000503401 TIMM17BO60830 172 aa10.09□□□□□ -0.79
SCLT1-205ENST00000503401 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
SCLT1-205ENST00000503401 ARL17AQ8IVW1 177 aa10.09□□□□□ -0.79
SCLT1-205ENST00000503401 IGLV1-50A0A075B6I6 118 aa10.08□□□□□ -0.8
SCLT1-205ENST00000503401 SLC25A34Q6PIV7 304 aa10.08□□□□□ -0.8
SCLT1-205ENST00000503401 UQCR10Q9UDW1 63 aa10.08□□□□□ -0.8
SCLT1-205ENST00000503401 M0R378 163 aa10.07□□□□□ -0.8
SCLT1-205ENST00000503401 TMEM238C9JI98 176 aa10.07□□□□□ -0.8
SCLT1-205ENST00000503401 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
SCLT1-205ENST00000503401 LINC00308Q8TCZ7 52 aa10.07□□□□□ -0.8
SCLT1-205ENST00000503401 DDTP30046 118 aa10.05□□□□□ -0.8
SCLT1-205ENST00000503401 C2orf91Q6ZV80 131 aa10.05□□□□□ -0.8
SCLT1-205ENST00000503401 BCE1O60756 84 aa10.04□□□□□ -0.8
SCLT1-205ENST00000503401 TRBV10-3A0A0K0K1G6 114 aa10.03□□□□□ -0.8
SCLT1-205ENST00000503401 SPANXDQ9BXN6 97 aa10.03□□□□□ -0.8
SCLT1-205ENST00000503401 TMEM126AQ9H061 195 aa10.03□□□□□ -0.8
SCLT1-205ENST00000503401 SPANXCQ9NY87 97 aa10.03□□□□□ -0.8
SCLT1-205ENST00000503401 NDUFC2O95298 119 aa10.02□□□□□ -0.81
SCLT1-205ENST00000503401 REG3GQ6UW15 175 aa10.02□□□□□ -0.81
SCLT1-205ENST00000503401 SPANXB1Q9NS25 103 aaPredicted RBP10.02□□□□□ -0.81
SCLT1-205ENST00000503401 HIGD1BQ9P298 99 aa10.02□□□□□ -0.81
SCLT1-205ENST00000503401 DMBT1Q9UGM3 2413 aaPredicted RBP10.01□□□□□ -0.81
SCLT1-205ENST00000503401 ZNF861PO60384 105 aa10□□□□□ -0.81
SCLT1-205ENST00000503401 TNXBP22105 4242 aa10□□□□□ -0.81
SCLT1-205ENST00000503401 TRBV10-2A0A0K0K1G8 114 aa10□□□□□ -0.81
SCLT1-205ENST00000503401 KRTAP29-1A8MX34 341 aaPredicted RBP10□□□□□ -0.81
SCLT1-205ENST00000503401 DIRC1Q969H9 104 aa10□□□□□ -0.81
SCLT1-205ENST00000503401 HERC1Q15751 4861 aa9.99□□□□□ -0.81
SCLT1-205ENST00000503401 H0Y9J4 135 aa9.99□□□□□ -0.81
SCLT1-205ENST00000503401 UBE2AP49459 152 aa9.99□□□□□ -0.81
SCLT1-205ENST00000503401 PRLHP81277 87 aa9.99□□□□□ -0.81
SCLT1-205ENST00000503401 FAM19A1Q7Z5A9 133 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms