RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 TMEM141Q96I45 108 aa4.13□□□□□ -1.75
VPS45-210ENST00000497638 C2orf88Q9BSF0 95 aa4.13□□□□□ -1.75
VPS45-210ENST00000497638 TMEM126AQ9H061 195 aa4.13□□□□□ -1.75
VPS45-210ENST00000497638 SSPOA2VEC9 5147 aa4.12□□□□□ -1.75
VPS45-210ENST00000497638 KANTRA0A1W2PQU2 76 aa4.12□□□□□ -1.75
VPS45-210ENST00000497638 MRPL51Q4U2R6 128 aaKnown RBP4.12□□□□□ -1.75
VPS45-210ENST00000497638 PCOTHQ58A44 107 aa4.12□□□□□ -1.75
VPS45-210ENST00000497638 FAM104BQ5XKR9 115 aa4.12□□□□□ -1.75
VPS45-210ENST00000497638 SPRR4Q96PI1 79 aa4.12□□□□□ -1.75
VPS45-210ENST00000497638 ZNF706Q9Y5V0 76 aaPredicted RBP4.12□□□□□ -1.75
VPS45-210ENST00000497638 FCGBPQ9Y6R7 5405 aaPredicted RBP4.11□□□□□ -1.75
VPS45-210ENST00000497638 SLC25A20O43772 301 aa4.11□□□□□ -1.75
VPS45-210ENST00000497638 SCGB1D1O95968 90 aa4.11□□□□□ -1.75
VPS45-210ENST00000497638 CKS2P33552 79 aa4.11□□□□□ -1.75
VPS45-210ENST00000497638 COX6B2Q6YFQ2 88 aa4.11□□□□□ -1.75
VPS45-210ENST00000497638 Q8N377 158 aa4.11□□□□□ -1.75
VPS45-210ENST00000497638 HIGD2AQ9BW72 106 aa4.11□□□□□ -1.75
VPS45-210ENST00000497638 KRTAP4-3Q9BYR4 195 aa4.11□□□□□ -1.75
VPS45-210ENST00000497638 EIF5A2Q9GZV4 153 aaKnown RBP4.11□□□□□ -1.75
VPS45-210ENST00000497638 TMEM238C9JI98 176 aa4.1□□□□□ -1.75
VPS45-210ENST00000497638 M0R378 163 aa4.1□□□□□ -1.75
VPS45-210ENST00000497638 KIAA1644Q3SXP7 199 aa4.1□□□□□ -1.75
VPS45-210ENST00000497638 GEMIN7Q9H840 131 aaKnown RBP4.1□□□□□ -1.75
VPS45-210ENST00000497638 USH2AO75445 5202 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 HMSDA8MTL9 139 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 TMEM250H0YL14 139 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 SCO1O75880 301 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 RAB5AP20339 215 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 HERVK_113P63121 156 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 SEC11AP67812 179 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 LCE3EQ5T5B0 92 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 FAM19A3Q7Z5A8 133 aa4.09□□□□□ -1.75
VPS45-210ENST00000497638 LINC01551Q86U37 167 aa4.08□□□□□ -1.76
VPS45-210ENST00000497638 AMELXQ99217 191 aa4.08□□□□□ -1.76
VPS45-210ENST00000497638 VCX2Q9H322 139 aa4.08□□□□□ -1.76
VPS45-210ENST00000497638 OSTCQ9NRP0 149 aa4.08□□□□□ -1.76
VPS45-210ENST00000497638 A0A1B0GW15 77 aa4.07□□□□□ -1.76
VPS45-210ENST00000497638 D6R8Y8 96 aa4.07□□□□□ -1.76
VPS45-210ENST00000497638 SMLR1H3BR10 107 aa4.07□□□□□ -1.76
VPS45-210ENST00000497638 NPYP01303 97 aa4.07□□□□□ -1.76
VPS45-210ENST00000497638 C2orf66Q6UXQ4 117 aa4.07□□□□□ -1.76
VPS45-210ENST00000497638 CDKN2A-AS1Q9UH64 79 aa4.07□□□□□ -1.76
VPS45-210ENST00000497638 NAT8BQ9UHF3 227 aa4.07□□□□□ -1.76
VPS45-210ENST00000497638 PPBPP02775 128 aa4.06□□□□□ -1.76
VPS45-210ENST00000497638 VPREB1P12018 145 aa4.06□□□□□ -1.76
VPS45-210ENST00000497638 COX7B2Q8TF08 81 aa4.06□□□□□ -1.76
VPS45-210ENST00000497638 CYSLTR1Q9Y271 337 aa4.06□□□□□ -1.76
VPS45-210ENST00000497638 V9GYV3 84 aa4.06□□□□□ -1.76
VPS45-210ENST00000497638 RAB5BP61020 215 aa4.05□□□□□ -1.76
VPS45-210ENST00000497638 LINC00483Q53H64 154 aa4.05□□□□□ -1.76
VPS45-210ENST00000497638 PDZD11Q5EBL8 140 aa4.05□□□□□ -1.76
VPS45-210ENST00000497638 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
VPS45-210ENST00000497638 SSBP3-AS1Q7Z2R9 100 aa4.05□□□□□ -1.76
VPS45-210ENST00000497638 SMIM7Q9BQ49 75 aa4.05□□□□□ -1.76
VPS45-210ENST00000497638 MACF1Q9UPN3 7388 aaKnown RBP4.04□□□□□ -1.76
VPS45-210ENST00000497638 F8W036 122 aa4.04□□□□□ -1.76
VPS45-210ENST00000497638 S100A8P05109 93 aa4.04□□□□□ -1.76
VPS45-210ENST00000497638 MOBPQ13875 183 aa4.04□□□□□ -1.76
VPS45-210ENST00000497638 FAM74A3Q4VXF1 159 aa4.04□□□□□ -1.76
VPS45-210ENST00000497638 IGIPA6NJ69 53 aa4.03□□□□□ -1.76
VPS45-210ENST00000497638 KRTAP4-16G5E9R7 235 aaPredicted RBP4.03□□□□□ -1.76
VPS45-210ENST00000497638 ATP5LO75964 103 aa4.03□□□□□ -1.76
VPS45-210ENST00000497638 CEBPGP53567 150 aa4.03□□□□□ -1.76
VPS45-210ENST00000497638 AKAP14Q86UN6 197 aa4.03□□□□□ -1.76
VPS45-210ENST00000497638 ORMDL3Q8N138 153 aa4.03□□□□□ -1.76
VPS45-210ENST00000497638 SND1-IT1Q9HBX3 110 aa4.03□□□□□ -1.76
VPS45-210ENST00000497638 IGLV9-49A0A0B4J1Y8 123 aa4.02□□□□□ -1.77
VPS45-210ENST00000497638 ADAMTSL4-AS1Q5T5F5 129 aa4.02□□□□□ -1.77
VPS45-210ENST00000497638 PRELID3AQ96N28 172 aa4.02□□□□□ -1.77
VPS45-210ENST00000497638 SMIM27A0A1W2PRY6 76 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 C9orf92A6NGG3 77 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 PFN2P35080 140 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 KRTAP12-2P59991 146 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 ORMDL2Q53FV1 153 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 GAGE2AQ6NT46 116 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 TMEM136Q6ZRR5 245 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 SMCR5Q8TEV8 140 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 LAMTOR2Q9Y2Q5 125 aa4.01□□□□□ -1.77
VPS45-210ENST00000497638 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
VPS45-210ENST00000497638 LOC389332A0A1B0GUA5 103 aa4□□□□□ -1.77
VPS45-210ENST00000497638 TINCRA0A1B0GVN0 87 aa4□□□□□ -1.77
VPS45-210ENST00000497638 K7EMI3 77 aa4□□□□□ -1.77
VPS45-210ENST00000497638 RAB14P61106 215 aa4□□□□□ -1.77
VPS45-210ENST00000497638 MRPL54Q6P161 138 aaKnown RBP4□□□□□ -1.77
VPS45-210ENST00000497638 TIMM17AQ99595 171 aa4□□□□□ -1.77
VPS45-210ENST00000497638 MAP1LC3AQ9H492 121 aa4□□□□□ -1.77
VPS45-210ENST00000497638 A0A1B0GXF2 115 aa3.99□□□□□ -1.77
VPS45-210ENST00000497638 SPINK8P0C7L1 97 aa3.99□□□□□ -1.77
VPS45-210ENST00000497638 COX17Q14061 63 aa3.99□□□□□ -1.77
VPS45-210ENST00000497638 Q8N8P6 123 aa3.99□□□□□ -1.77
VPS45-210ENST00000497638 Q8NDZ9 215 aa3.99□□□□□ -1.77
VPS45-210ENST00000497638 ERG28Q9UKR5 140 aa3.99□□□□□ -1.77
VPS45-210ENST00000497638 ETDCA0A1B0GVM5 59 aa3.98□□□□□ -1.77
VPS45-210ENST00000497638 G0S2P27469 103 aa3.98□□□□□ -1.77
VPS45-210ENST00000497638 SPRR1AP35321 89 aa3.98□□□□□ -1.77
VPS45-210ENST00000497638 SLC51BQ86UW2 128 aa3.98□□□□□ -1.77
VPS45-210ENST00000497638 LIMD2Q9BT23 127 aa3.98□□□□□ -1.77
VPS45-210ENST00000497638 H3BRM9 83 aa3.97□□□□□ -1.77
VPS45-210ENST00000497638 IGLV6-57P01721 117 aa3.97□□□□□ -1.77
VPS45-210ENST00000497638 RPL37P61927 97 aaKnown RBP3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms