RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 DPM2O94777 84 aa12.43□□□□□ -0.42
COL9A2-211ENST00000496215 HERV-K104P63124 156 aa12.43□□□□□ -0.42
COL9A2-211ENST00000496215 MEIG1Q5JSS6 88 aa12.43□□□□□ -0.42
COL9A2-211ENST00000496215 LRP2P98164 4655 aa12.43□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BKO60814 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BJP06899 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 KRTAP1-4P0C5Y4 121 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BOP23527 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BBP33778 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BDP58876 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BCP62807 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST2H2BEQ16778 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.42□□□□□ -0.42
COL9A2-211ENST00000496215 PRR26Q8N8Z3 221 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BHQ93079 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BNQ99877 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 HIST1H2BMQ99879 126 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 NDUFA12Q9UI09 145 aa12.42□□□□□ -0.42
COL9A2-211ENST00000496215 PMCHL2Q9BQD1 86 aa12.41□□□□□ -0.42
COL9A2-211ENST00000496215 MAP1LC3CQ9BXW4 147 aa12.41□□□□□ -0.42
COL9A2-211ENST00000496215 IGLV1-50A0A075B6I6 118 aa12.4□□□□□ -0.42
COL9A2-211ENST00000496215 MYMXA0A1B0GTQ4 84 aa12.4□□□□□ -0.42
COL9A2-211ENST00000496215 ATP6V1G1O75348 118 aa12.4□□□□□ -0.42
COL9A2-211ENST00000496215 SMIM13P0DJ93 91 aa12.4□□□□□ -0.42
COL9A2-211ENST00000496215 HERVK_113P61574 105 aa12.4□□□□□ -0.42
COL9A2-211ENST00000496215 Q8NDZ9 215 aa12.4□□□□□ -0.42
COL9A2-211ENST00000496215 LEPROTO15243 131 aa12.39□□□□□ -0.43
COL9A2-211ENST00000496215 IGKCP01834 107 aa12.39□□□□□ -0.43
COL9A2-211ENST00000496215 TSPEAR-AS2P59090 65 aa12.39□□□□□ -0.43
COL9A2-211ENST00000496215 PLEKHB2Q96CS7 222 aa12.39□□□□□ -0.43
COL9A2-211ENST00000496215 LINC00587B1AMM8 73 aa12.38□□□□□ -0.43
COL9A2-211ENST00000496215 UBE2AP49459 152 aa12.38□□□□□ -0.43
COL9A2-211ENST00000496215 RPL13AP40429 203 aaKnown RBP12.36□□□□□ -0.43
COL9A2-211ENST00000496215 MIR7-3HGQ8N6C7 128 aa12.36□□□□□ -0.43
COL9A2-211ENST00000496215 J3QQQ9 107 aa12.35□□□□□ -0.43
COL9A2-211ENST00000496215 TMEM126AQ9H061 195 aa12.35□□□□□ -0.43
COL9A2-211ENST00000496215 TMEM238C9JI98 176 aa12.34□□□□□ -0.43
COL9A2-211ENST00000496215 KRTAP13-1Q8IUC0 172 aa12.34□□□□□ -0.43
COL9A2-211ENST00000496215 LGALS3P17931 250 aaKnown RBP12.33□□□□□ -0.44
COL9A2-211ENST00000496215 NMUP48645 174 aa12.33□□□□□ -0.44
COL9A2-211ENST00000496215 BOD1L2Q8IYS8 172 aa12.33□□□□□ -0.44
COL9A2-211ENST00000496215 SYS1-DBNDD2H3BUS1 97 aa12.32□□□□□ -0.44
COL9A2-211ENST00000496215 M0R378 163 aa12.31□□□□□ -0.44
COL9A2-211ENST00000496215 PRLHP81277 87 aa12.31□□□□□ -0.44
COL9A2-211ENST00000496215 FAM19A1Q7Z5A9 133 aa12.31□□□□□ -0.44
COL9A2-211ENST00000496215 NCR3O14931 201 aa12.3□□□□□ -0.44
COL9A2-211ENST00000496215 DAND5Q8N907 189 aa12.28□□□□□ -0.44
COL9A2-211ENST00000496215 IGKV2D-26A0A0A0MRZ7 120 aa12.27□□□□□ -0.45
COL9A2-211ENST00000496215 E9PLD3 99 aa12.27□□□□□ -0.45
COL9A2-211ENST00000496215 LINC01545Q5VT33 79 aa12.26□□□□□ -0.45
COL9A2-211ENST00000496215 PRYO14603 147 aa12.25□□□□□ -0.45
COL9A2-211ENST00000496215 COA6Q5JTJ3 125 aaKnown RBP12.25□□□□□ -0.45
COL9A2-211ENST00000496215 PET117Q6UWS5 81 aa12.25□□□□□ -0.45
COL9A2-211ENST00000496215 MIEN1Q9BRT3 115 aa12.25□□□□□ -0.45
COL9A2-211ENST00000496215 A0A087X002 238 aa12.24□□□□□ -0.45
COL9A2-211ENST00000496215 CRYGAP11844 174 aa12.24□□□□□ -0.45
COL9A2-211ENST00000496215 RNF213Q63HN8 5207 aa12.22□□□□□ -0.45
COL9A2-211ENST00000496215 LOC107984156A0A0G2JMH3 177 aa12.22□□□□□ -0.45
COL9A2-211ENST00000496215 ARL17AQ8IVW1 177 aa12.22□□□□□ -0.45
COL9A2-211ENST00000496215 C3orf79P0CE67 100 aa12.21□□□□□ -0.45
COL9A2-211ENST00000496215 A0A0J9YXY3 114 aa12.2□□□□□ -0.46
COL9A2-211ENST00000496215 TRBV10-3A0A0K0K1G6 114 aa12.2□□□□□ -0.46
COL9A2-211ENST00000496215 KRTDAPP60985 99 aa12.2□□□□□ -0.46
COL9A2-211ENST00000496215 S100A12P80511 92 aa12.2□□□□□ -0.46
COL9A2-211ENST00000496215 FAM229BQ4G0N7 80 aa12.2□□□□□ -0.46
COL9A2-211ENST00000496215 TYMSOSQ8TAI1 123 aa12.2□□□□□ -0.46
COL9A2-211ENST00000496215 HIGD2AQ9BW72 106 aa12.2□□□□□ -0.46
COL9A2-211ENST00000496215 ANAPC11Q9NYG5 84 aa12.2□□□□□ -0.46
COL9A2-211ENST00000496215 LPAP08519 4548 aa12.19□□□□□ -0.46
COL9A2-211ENST00000496215 KCNQ1DNQ9H478 68 aa12.19□□□□□ -0.46
COL9A2-211ENST00000496215 SPANXB1Q9NS25 103 aaPredicted RBP12.19□□□□□ -0.46
COL9A2-211ENST00000496215 TRBV10-2A0A0K0K1G8 114 aa12.18□□□□□ -0.46
COL9A2-211ENST00000496215 LINC00337Q8N6G1 96 aa12.18□□□□□ -0.46
COL9A2-211ENST00000496215 ETDCA0A1B0GVM5 59 aa12.16□□□□□ -0.46
COL9A2-211ENST00000496215 C20orf202A1L168 122 aa12.16□□□□□ -0.46
COL9A2-211ENST00000496215 DDTP30046 118 aa12.16□□□□□ -0.46
COL9A2-211ENST00000496215 SPRR1AP35321 89 aa12.16□□□□□ -0.46
COL9A2-211ENST00000496215 NPC2P61916 151 aa12.16□□□□□ -0.46
COL9A2-211ENST00000496215 NDUFC2O95298 119 aa12.15□□□□□ -0.46
COL9A2-211ENST00000496215 S100A1P23297 94 aa12.15□□□□□ -0.46
COL9A2-211ENST00000496215 KRTAP13-2Q52LG2 175 aa12.15□□□□□ -0.46
COL9A2-211ENST00000496215 ADAMTSL4-AS1Q5T5F5 129 aa12.14□□□□□ -0.47
COL9A2-211ENST00000496215 ZNF815PA8K554 130 aa12.13□□□□□ -0.47
COL9A2-211ENST00000496215 SOSTDC1Q6X4U4 206 aa12.13□□□□□ -0.47
COL9A2-211ENST00000496215 ZNF706Q9Y5V0 76 aaPredicted RBP12.13□□□□□ -0.47
COL9A2-211ENST00000496215 KRTAP4-16G5E9R7 235 aaPredicted RBP12.12□□□□□ -0.47
COL9A2-211ENST00000496215 S100A7L2Q5SY68 101 aa12.12□□□□□ -0.47
COL9A2-211ENST00000496215 TIMM17BO60830 172 aa12.11□□□□□ -0.47
COL9A2-211ENST00000496215 LITAFQ99732 161 aa12.11□□□□□ -0.47
COL9A2-211ENST00000496215 SPRR4Q96PI1 79 aa12.1□□□□□ -0.47
COL9A2-211ENST00000496215 EIF4EBP3O60516 100 aaPredicted RBP12.09□□□□□ -0.47
COL9A2-211ENST00000496215 TSPAN13O95857 204 aa12.09□□□□□ -0.47
COL9A2-211ENST00000496215 TTTY13Q9BZ97 58 aa12.09□□□□□ -0.47
COL9A2-211ENST00000496215 IGLV6-57P01721 117 aa12.08□□□□□ -0.48
COL9A2-211ENST00000496215 AKR1D1P51857 326 aa12.08□□□□□ -0.48
COL9A2-211ENST00000496215 LINC00308Q8TCZ7 52 aa12.08□□□□□ -0.48
COL9A2-211ENST00000496215 TRAV23DV6A0A075B6W5 121 aa12.07□□□□□ -0.48
COL9A2-211ENST00000496215 B5MCH6 92 aa12.07□□□□□ -0.48
COL9A2-211ENST00000496215 LINC00304Q8N9R0 145 aa12.07□□□□□ -0.48
COL9A2-211ENST00000496215 SMCR5Q8TEV8 140 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms