RNA–Protein interactions for RNA: ENST00000496050.1

SSR3-208, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 4 BASIC

Gene SSR3, Length 579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-208ENST00000496050 KRTAP20-1Q3LI63 56 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 LINC00643Q86TS7 51 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 KRTAP2-4Q9BYR9 128 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 KRTAP2-1Q9BYU5 128 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 CLTCQ00610 1675 aaKnown RBP0.67□□□□□ -2.3
SSR3-208ENST00000496050 PDCD11Q14690 1871 aaKnown RBP0.67□□□□□ -2.3
SSR3-208ENST00000496050 ERVK-7P63135 1459 aa0.67□□□□□ -2.3
SSR3-208ENST00000496050 CACNA1CQ13936 2221 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 RELNP78509 3460 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 CELSR1Q9NYQ6 3014 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 CUX1P39880 1505 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 NEXMIFQ5QGS0 1516 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 A0A087WVE0 104 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 HAMPP81172 84 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 SPINK6Q6UWN8 80 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 SSBP3-AS1Q7Z2R9 100 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 ST20Q9HBF5 79 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 SPCS1Q9Y6A9 102 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 SPTAN1Q13813 2472 aaKnown RBP0.66□□□□□ -2.3
SSR3-208ENST00000496050 NBEAQ8NFP9 2946 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 C1orf167Q5SNV9 1468 aa0.66□□□□□ -2.3
SSR3-208ENST00000496050 SPTBN5Q9NRC6 3674 aaKnown RBP0.66□□□□□ -2.3
SSR3-208ENST00000496050 SCN7AQ01118 1682 aa0.65□□□□□ -2.3
SSR3-208ENST00000496050 PPLO60437 1756 aa0.65□□□□□ -2.3
SSR3-208ENST00000496050 DNAJC13O75165 2243 aa0.65□□□□□ -2.3
SSR3-208ENST00000496050 KANTRA0A1W2PQU2 76 aa0.65□□□□□ -2.31
SSR3-208ENST00000496050 D6R8Y8 96 aa0.65□□□□□ -2.31
SSR3-208ENST00000496050 LEPROTL1O95214 131 aa0.65□□□□□ -2.31
SSR3-208ENST00000496050 ADIRFQ15847 76 aa0.65□□□□□ -2.31
SSR3-208ENST00000496050 MUSTN1Q8IVN3 82 aa0.65□□□□□ -2.31
SSR3-208ENST00000496050 PRRC2CQ9Y520 2896 aaKnown RBP0.65□□□□□ -2.31
SSR3-208ENST00000496050 KDM3BQ7LBC6 1761 aa0.65□□□□□ -2.31
SSR3-208ENST00000496050 RGPD4Q7Z3J3 1758 aa0.65□□□□□ -2.31
SSR3-208ENST00000496050 RRBP1Q9P2E9 1410 aaKnown RBP0.64□□□□□ -2.31
SSR3-208ENST00000496050 KDM5DQ9BY66 1539 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 MYO3AQ8NEV4 1616 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 BTAF1O14981 1849 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 PLXNB2O15031 1838 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 COL12A1Q99715 3063 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 EP400Q96L91 3159 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 TLN1Q9Y490 2541 aaKnown RBP0.64□□□□□ -2.31
SSR3-208ENST00000496050 TLN2Q9Y4G6 2542 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 OTOGQ6ZRI0 2925 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 TRBV6-1A0A0K0K1D8 114 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 IQCF6A8MYZ5 107 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 H0Y9P7 68 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 S100A3P33764 101 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 FDCSPQ8NFU4 85 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 AHCTF1Q8WYP5 2266 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 CENPFP49454 3210 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 LRP6O75581 1613 aa0.64□□□□□ -2.31
SSR3-208ENST00000496050 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.64□□□□□ -2.31
SSR3-208ENST00000496050 UNC80Q8N2C7 3258 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 HMCN2Q8NDA2 5059 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
SSR3-208ENST00000496050 TNCP24821 2201 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 A0A0D9SFI3 127 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 MYMXA0A1B0GTQ4 84 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 IGLC3P0DOY3 106 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 DEFB107AQ8IZN7 70 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 CNFNQ9BYD5 112 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 UBE2D4Q9Y2X8 147 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 HERC2O95714 4834 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 WNK3Q9BYP7 1800 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 RIF1Q5UIP0 2472 aaKnown RBP0.63□□□□□ -2.31
SSR3-208ENST00000496050 CNOT1A5YKK6 2376 aaKnown RBP0.63□□□□□ -2.31
SSR3-208ENST00000496050 LAMC1P11047 1609 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 KIF14Q15058 1648 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 CEP250Q9BV73 2442 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 PCNX1Q96RV3 2341 aa0.63□□□□□ -2.31
SSR3-208ENST00000496050 RGPD3A6NKT7 1758 aaPredicted RBP0.62□□□□□ -2.31
SSR3-208ENST00000496050 TPRP12270 2363 aaKnown RBP0.62□□□□□ -2.31
SSR3-208ENST00000496050 LRRC9Q6ZRR7 1453 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 MGAM2Q2M2H8 2515 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 PIEZO2Q9H5I5 2752 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 BVES-AS1Q5T3Y7 98 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 GOLGA4Q13439 2230 aaKnown RBP0.62□□□□□ -2.31
SSR3-208ENST00000496050 TULP4Q9NRJ4 1543 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 C5orf42Q9H799 3197 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 ASPMQ8IZT6 3477 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 MYH4Q9Y623 1939 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 TGP01266 2768 aa0.62□□□□□ -2.31
SSR3-208ENST00000496050 NUP188Q5SRE5 1749 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 DSPP15924 2871 aaKnown RBP0.61□□□□□ -2.31
SSR3-208ENST00000496050 MAP3K4Q9Y6R4 1608 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 DCHS1Q96JQ0 3298 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 I3L2K1 104 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 IGLC2P0DOY2 106 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 PLGLAQ15195 96 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 DEFB121Q5J5C9 76 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 C6orf201Q7Z4U5 140 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 DMBT1Q9UGM3 2413 aaPredicted RBP0.61□□□□□ -2.31
SSR3-208ENST00000496050 NIPBLQ6KC79 2804 aaeCLIP0.61□□□□□ -2.31
SSR3-208ENST00000496050 SHPRHQ149N8 1683 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 F8P00451 2351 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 UBR1Q8IWV7 1749 aa0.61□□□□□ -2.31
SSR3-208ENST00000496050 CRYBG3Q68DQ2 2970 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 MAP3K1Q13233 1512 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 DCAF1Q9Y4B6 1507 aa0.6□□□□□ -2.31
SSR3-208ENST00000496050 MTORP42345 2549 aa0.6□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms