RNA–Protein interactions for RNA: ENST00000494836.2

YIF1A-209, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-209ENST00000494836 A0A0U1RRA0 63 aa10.02□□□□□ -0.81
YIF1A-209ENST00000494836 LGALS3P17931 250 aaKnown RBP10.02□□□□□ -0.81
YIF1A-209ENST00000494836 C1orf137Q5JT78 98 aa10.02□□□□□ -0.81
YIF1A-209ENST00000494836 MRPL55Q7Z7F7 128 aaKnown RBP10.02□□□□□ -0.81
YIF1A-209ENST00000494836 KRTAP11-1Q8IUC1 163 aa10.02□□□□□ -0.81
YIF1A-209ENST00000494836 LINC00587B1AMM8 73 aa10.01□□□□□ -0.81
YIF1A-209ENST00000494836 S100A6P06703 90 aa10.01□□□□□ -0.81
YIF1A-209ENST00000494836 SMIM13P0DJ93 91 aa10.01□□□□□ -0.81
YIF1A-209ENST00000494836 NMUP48645 174 aa10.01□□□□□ -0.81
YIF1A-209ENST00000494836 NKAPP1Q8N9T2 125 aa10.01□□□□□ -0.81
YIF1A-209ENST00000494836 IGLV5-37A0A075B6J1 123 aa10□□□□□ -0.81
YIF1A-209ENST00000494836 C20orf202A1L168 122 aa10□□□□□ -0.81
YIF1A-209ENST00000494836 E9PLD3 99 aa10□□□□□ -0.81
YIF1A-209ENST00000494836 S100A2P29034 98 aa10□□□□□ -0.81
YIF1A-209ENST00000494836 KRTAP29-1A8MX34 341 aaPredicted RBP9.99□□□□□ -0.81
YIF1A-209ENST00000494836 HIST3H2BBQ8N257 126 aa9.99□□□□□ -0.81
YIF1A-209ENST00000494836 RPL24P83731 157 aaKnown RBP9.98□□□□□ -0.81
YIF1A-209ENST00000494836 SPINK6Q6UWN8 80 aa9.98□□□□□ -0.81
YIF1A-209ENST00000494836 GAGE10A6NGK3 116 aa9.97□□□□□ -0.81
YIF1A-209ENST00000494836 J3QL48 77 aa9.97□□□□□ -0.81
YIF1A-209ENST00000494836 OXTP01178 125 aa9.97□□□□□ -0.81
YIF1A-209ENST00000494836 MIR7-3HGQ8N6C7 128 aa9.97□□□□□ -0.81
YIF1A-209ENST00000494836 LINC00167Q96N53 147 aa9.97□□□□□ -0.81
YIF1A-209ENST00000494836 HIST1H2BLQ99880 126 aa9.97□□□□□ -0.81
YIF1A-209ENST00000494836 IGLV7-43P04211 117 aa9.96□□□□□ -0.82
YIF1A-209ENST00000494836 VPREB1P12018 145 aa9.96□□□□□ -0.82
YIF1A-209ENST00000494836 SRSF9Q13242 221 aaKnown RBP eCLIP9.96□□□□□ -0.82
YIF1A-209ENST00000494836 RPL37AP8A6NKH3 93 aa9.95□□□□□ -0.82
YIF1A-209ENST00000494836 AKR1D1P51857 326 aa9.95□□□□□ -0.82
YIF1A-209ENST00000494836 HERC1Q15751 4861 aa9.94□□□□□ -0.82
YIF1A-209ENST00000494836 BOD1L2Q8IYS8 172 aa9.93□□□□□ -0.82
YIF1A-209ENST00000494836 Q8NDZ9 215 aa9.93□□□□□ -0.82
YIF1A-209ENST00000494836 SNRPEP62304 92 aaKnown RBP9.92□□□□□ -0.82
YIF1A-209ENST00000494836 REG3GQ6UW15 175 aa9.92□□□□□ -0.82
YIF1A-209ENST00000494836 ATOH7Q8N100 152 aa9.92□□□□□ -0.82
YIF1A-209ENST00000494836 DAND5Q8N907 189 aa9.92□□□□□ -0.82
YIF1A-209ENST00000494836 IGKV2-28A0A075B6P5 120 aa9.91□□□□□ -0.82
YIF1A-209ENST00000494836 IGKV2D-26A0A0A0MRZ7 120 aa9.91□□□□□ -0.82
YIF1A-209ENST00000494836 A0A0J9YXY3 114 aa9.91□□□□□ -0.82
YIF1A-209ENST00000494836 IGKV2D-28P01615 120 aa9.91□□□□□ -0.82
YIF1A-209ENST00000494836 DIRC1Q969H9 104 aa9.9□□□□□ -0.82
YIF1A-209ENST00000494836 ZNF815PA8K554 130 aa9.89□□□□□ -0.83
YIF1A-209ENST00000494836 BCE1O60756 84 aa9.89□□□□□ -0.83
YIF1A-209ENST00000494836 MIEN1Q9BRT3 115 aa9.89□□□□□ -0.83
YIF1A-209ENST00000494836 IGLV1-50A0A075B6I6 118 aa9.88□□□□□ -0.83
YIF1A-209ENST00000494836 C5orf52A6NGY3 159 aa9.88□□□□□ -0.83
YIF1A-209ENST00000494836 M0R378 163 aa9.88□□□□□ -0.83
YIF1A-209ENST00000494836 ANKRD39Q53RE8 183 aa9.88□□□□□ -0.83
YIF1A-209ENST00000494836 LOC107984156A0A0G2JMH3 177 aa9.87□□□□□ -0.83
YIF1A-209ENST00000494836 H0Y9J4 135 aa9.87□□□□□ -0.83
YIF1A-209ENST00000494836 ZNF861PO60384 105 aa9.87□□□□□ -0.83
YIF1A-209ENST00000494836 ARL17AQ8IVW1 177 aa9.87□□□□□ -0.83
YIF1A-209ENST00000494836 TTTY13Q9BZ97 58 aa9.87□□□□□ -0.83
YIF1A-209ENST00000494836 NCR3O14931 201 aa9.86□□□□□ -0.83
YIF1A-209ENST00000494836 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
YIF1A-209ENST00000494836 TIMM17BO60830 172 aa9.85□□□□□ -0.83
YIF1A-209ENST00000494836 RPL28P46779 137 aaKnown RBP9.85□□□□□ -0.83
YIF1A-209ENST00000494836 LINC01600Q96MT4 127 aa9.85□□□□□ -0.83
YIF1A-209ENST00000494836 TMEM238C9JI98 176 aa9.84□□□□□ -0.83
YIF1A-209ENST00000494836 LITAFQ99732 161 aa9.84□□□□□ -0.83
YIF1A-209ENST00000494836 TMEM126AQ9H061 195 aa9.84□□□□□ -0.83
YIF1A-209ENST00000494836 MT1HL1P0DM35 61 aa9.83□□□□□ -0.84
YIF1A-209ENST00000494836 UBE2AP49459 152 aa9.83□□□□□ -0.84
YIF1A-209ENST00000494836 NPC2P61916 151 aa9.83□□□□□ -0.84
YIF1A-209ENST00000494836 TNXBP22105 4242 aa9.82□□□□□ -0.84
YIF1A-209ENST00000494836 HSBP1L1C9JCN9 74 aa9.82□□□□□ -0.84
YIF1A-209ENST00000494836 SOSTDC1Q6X4U4 206 aa9.82□□□□□ -0.84
YIF1A-209ENST00000494836 SCGB1D4Q6XE38 83 aa9.82□□□□□ -0.84
YIF1A-209ENST00000494836 SPANXB1Q9NS25 103 aaPredicted RBP9.82□□□□□ -0.84
YIF1A-209ENST00000494836 TRBV10-2A0A0K0K1G8 114 aa9.81□□□□□ -0.84
YIF1A-209ENST00000494836 NDUFC2O95298 119 aa9.81□□□□□ -0.84
YIF1A-209ENST00000494836 SCGB1D1O95968 90 aa9.81□□□□□ -0.84
YIF1A-209ENST00000494836 EIF4EBP3O60516 100 aaPredicted RBP9.8□□□□□ -0.84
YIF1A-209ENST00000494836 FAM19A1Q7Z5A9 133 aa9.8□□□□□ -0.84
YIF1A-209ENST00000494836 KRTAP13-1Q8IUC0 172 aa9.8□□□□□ -0.84
YIF1A-209ENST00000494836 PCP2Q8IVA1 136 aa9.8□□□□□ -0.84
YIF1A-209ENST00000494836 LINC00308Q8TCZ7 52 aa9.8□□□□□ -0.84
YIF1A-209ENST00000494836 TRBV10-3A0A0K0K1G6 114 aa9.79□□□□□ -0.84
YIF1A-209ENST00000494836 PRYO14603 147 aa9.79□□□□□ -0.84
YIF1A-209ENST00000494836 PRLHP81277 87 aa9.79□□□□□ -0.84
YIF1A-209ENST00000494836 S100A12P80511 92 aa9.78□□□□□ -0.84
YIF1A-209ENST00000494836 DDTP30046 118 aa9.77□□□□□ -0.85
YIF1A-209ENST00000494836 KCNQ1DNQ9H478 68 aa9.77□□□□□ -0.85
YIF1A-209ENST00000494836 SPANXCQ9NY87 97 aa9.77□□□□□ -0.85
YIF1A-209ENST00000494836 KRTAP1-4P0C5Y4 121 aa9.76□□□□□ -0.85
YIF1A-209ENST00000494836 S100A7L2Q5SY68 101 aa9.76□□□□□ -0.85
YIF1A-209ENST00000494836 SPANXDQ9BXN6 97 aa9.76□□□□□ -0.85
YIF1A-209ENST00000494836 KRTAP10-8P60410 259 aa9.75□□□□□ -0.85
YIF1A-209ENST00000494836 SPRR1AP35321 89 aa9.74□□□□□ -0.85
YIF1A-209ENST00000494836 LINC00337Q8N6G1 96 aa9.74□□□□□ -0.85
YIF1A-209ENST00000494836 COPS9Q8WXC6 57 aa9.74□□□□□ -0.85
YIF1A-209ENST00000494836 ETDCA0A1B0GVM5 59 aa9.73□□□□□ -0.85
YIF1A-209ENST00000494836 IGLV6-57P01721 117 aa9.73□□□□□ -0.85
YIF1A-209ENST00000494836 Q6ZVH6 145 aa9.73□□□□□ -0.85
YIF1A-209ENST00000494836 PRR26Q8N8Z3 221 aa9.73□□□□□ -0.85
YIF1A-209ENST00000494836 IFITM1P13164 125 aa9.72□□□□□ -0.85
YIF1A-209ENST00000494836 HIGD2AQ9BW72 106 aa9.72□□□□□ -0.85
YIF1A-209ENST00000494836 TMA7Q9Y2S6 64 aaKnown RBP9.72□□□□□ -0.85
YIF1A-209ENST00000494836 TRAV23DV6A0A075B6W5 121 aa9.7□□□□□ -0.86
YIF1A-209ENST00000494836 KRTAP4-16G5E9R7 235 aaPredicted RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 232.5 ms