RNA–Protein interactions for RNA: ENST00000494707.5

RPGR-209, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 5

Gene RPGR, Length 426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-209ENST00000494707 hADV29S1A0JD25 119 aa-1.03□□□□□ -2.57
RPGR-209ENST00000494707 CDKN2A-AS1Q9UH64 79 aa-1.03□□□□□ -2.57
RPGR-209ENST00000494707 TCHHQ07283 1943 aa-1.03□□□□□ -2.57
RPGR-209ENST00000494707 SCN7AQ01118 1682 aa-1.04□□□□□ -2.58
RPGR-209ENST00000494707 KIAA1109Q2LD37 5005 aa-1.04□□□□□ -2.58
RPGR-209ENST00000494707 H0YGG7 62 aa-1.04□□□□□ -2.58
RPGR-209ENST00000494707 MRPS10P82664 201 aaKnown RBP-1.04□□□□□ -2.58
RPGR-209ENST00000494707 PSMG4Q5JS54 123 aa-1.04□□□□□ -2.58
RPGR-209ENST00000494707 CACFD1Q9UGQ2 172 aa-1.04□□□□□ -2.58
RPGR-209ENST00000494707 TOP2BQ02880 1626 aa-1.04□□□□□ -2.58
RPGR-209ENST00000494707 MAPKBP1O60336 1514 aa-1.05□□□□□ -2.58
RPGR-209ENST00000494707 SPTY2D1-AS1A0A0U1RR47 76 aa-1.05□□□□□ -2.58
RPGR-209ENST00000494707 PMCHL1Q16048 86 aa-1.05□□□□□ -2.58
RPGR-209ENST00000494707 GTF2H5Q6ZYL4 71 aa-1.05□□□□□ -2.58
RPGR-209ENST00000494707 GNG8Q9UK08 70 aa-1.05□□□□□ -2.58
RPGR-209ENST00000494707 CUL7Q14999 1698 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 TRBV25-1A0A075B6N4 114 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 NDUFC1O43677 76 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 ASIPP42127 132 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 HIGD1BQ9P298 99 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 REV3LO60673 3130 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 NUP188Q5SRE5 1749 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 NALCNQ8IZF0 1738 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 CLIP1P30622 1438 aa-1.06□□□□□ -2.58
RPGR-209ENST00000494707 LAMA2P24043 3122 aaKnown RBP-1.06□□□□□ -2.58
RPGR-209ENST00000494707 DNAH9Q9NYC9 4486 aa-1.07□□□□□ -2.58
RPGR-209ENST00000494707 TRBV7-7A0A0K0K1E9 115 aa-1.07□□□□□ -2.58
RPGR-209ENST00000494707 WFDC13Q8IUB5 93 aa-1.07□□□□□ -2.58
RPGR-209ENST00000494707 TMEM203Q969S6 136 aa-1.07□□□□□ -2.58
RPGR-209ENST00000494707 SLIT1O75093 1534 aa-1.07□□□□□ -2.58
RPGR-209ENST00000494707 MARF1Q9Y4F3 1742 aaKnown RBP-1.07□□□□□ -2.58
RPGR-209ENST00000494707 LAMA1P25391 3075 aa-1.07□□□□□ -2.58
RPGR-209ENST00000494707 NRKQ7Z2Y5 1582 aa-1.08□□□□□ -2.58
RPGR-209ENST00000494707 TEP1Q99973 2627 aaKnown RBP-1.08□□□□□ -2.58
RPGR-209ENST00000494707 MT1AP04731 61 aa-1.08□□□□□ -2.58
RPGR-209ENST00000494707 LELP1Q5T871 98 aa-1.08□□□□□ -2.58
RPGR-209ENST00000494707 PZPP20742 1482 aa-1.08□□□□□ -2.58
RPGR-209ENST00000494707 NBASA2RRP1 2371 aa-1.09□□□□□ -2.58
RPGR-209ENST00000494707 C2orf88Q9BSF0 95 aa-1.09□□□□□ -2.58
RPGR-209ENST00000494707 NCOA3Q9Y6Q9 1424 aa-1.09□□□□□ -2.58
RPGR-209ENST00000494707 TNRC18O15417 2968 aaPredicted RBP-1.1□□□□□ -2.59
RPGR-209ENST00000494707 CUBNO60494 3623 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 GNGT2O14610 69 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 MPC2O95563 127 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 TRGV9Q99603 122 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 PSENENQ9NZ42 101 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 ABCC5O15440 1437 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 LRRC37AA6NMS7 1700 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 DNAH2Q9P225 4427 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 COL4A6Q14031 1691 aa-1.1□□□□□ -2.59
RPGR-209ENST00000494707 PRRC2CQ9Y520 2896 aaKnown RBP-1.1□□□□□ -2.59
RPGR-209ENST00000494707 PTPN23Q9H3S7 1636 aa-1.11□□□□□ -2.59
RPGR-209ENST00000494707 UQCRHP07919 91 aa-1.11□□□□□ -2.59
RPGR-209ENST00000494707 VPS13BQ7Z7G8 4022 aa-1.11□□□□□ -2.59
RPGR-209ENST00000494707 LYSTQ99698 3801 aa-1.11□□□□□ -2.59
RPGR-209ENST00000494707 ADAMTS12P58397 1594 aa-1.12□□□□□ -2.59
RPGR-209ENST00000494707 H7BZZ5 65 aa-1.12□□□□□ -2.59
RPGR-209ENST00000494707 AP4S1Q9Y587 144 aa-1.12□□□□□ -2.59
RPGR-209ENST00000494707 PDCD11Q14690 1871 aaKnown RBP-1.12□□□□□ -2.59
RPGR-209ENST00000494707 SPHKAPQ2M3C7 1700 aa-1.12□□□□□ -2.59
RPGR-209ENST00000494707 AKAP13Q12802 2813 aa-1.12□□□□□ -2.59
RPGR-209ENST00000494707 KNL1Q8NG31 2342 aa-1.12□□□□□ -2.59
RPGR-209ENST00000494707 KNDC1Q76NI1 1749 aa-1.13□□□□□ -2.59
RPGR-209ENST00000494707 MLH3Q9UHC1 1453 aa-1.13□□□□□ -2.59
RPGR-209ENST00000494707 EIF4G3O43432 1585 aaKnown RBP-1.13□□□□□ -2.59
RPGR-209ENST00000494707 TRANK1O15050 2925 aa-1.14□□□□□ -2.59
RPGR-209ENST00000494707 C20orf202A1L168 122 aa-1.14□□□□□ -2.59
RPGR-209ENST00000494707 H3BNG1 76 aa-1.14□□□□□ -2.59
RPGR-209ENST00000494707 NMSQ5H8A3 153 aa-1.14□□□□□ -2.59
RPGR-209ENST00000494707 ALKAL2Q6UX46 152 aa-1.14□□□□□ -2.59
RPGR-209ENST00000494707 PLECQ15149 4684 aaKnown RBP-1.14□□□□□ -2.59
RPGR-209ENST00000494707 TARBP1Q13395 1621 aaKnown RBP-1.15□□□□□ -2.59
RPGR-209ENST00000494707 TMEM218A2RU14 115 aa-1.15□□□□□ -2.59
RPGR-209ENST00000494707 HMGN3Q15651 99 aa-1.15□□□□□ -2.59
RPGR-209ENST00000494707 RNF213Q63HN8 5207 aa-1.15□□□□□ -2.59
RPGR-209ENST00000494707 TROQ12816 1431 aaPredicted RBP-1.15□□□□□ -2.59
RPGR-209ENST00000494707 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.16□□□□□ -2.59
RPGR-209ENST00000494707 SAMD9Q5K651 1589 aa-1.16□□□□□ -2.59
RPGR-209ENST00000494707 LINC00587B1AMM8 73 aa-1.16□□□□□ -2.6
RPGR-209ENST00000494707 IGLC2P0DOY2 106 aa-1.16□□□□□ -2.6
RPGR-209ENST00000494707 IGLC3P0DOY3 106 aa-1.16□□□□□ -2.6
RPGR-209ENST00000494707 CC2D2AQ9P2K1 1620 aa-1.16□□□□□ -2.6
RPGR-209ENST00000494707 ABCC2Q92887 1545 aa-1.16□□□□□ -2.6
RPGR-209ENST00000494707 ANK3Q12955 4377 aaKnown RBP-1.16□□□□□ -2.6
RPGR-209ENST00000494707 ANKRD11Q6UB99 2663 aaPredicted RBP-1.16□□□□□ -2.6
RPGR-209ENST00000494707 RYR2Q92736 4967 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 DMXL1Q9Y485 3027 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 KIAA1551Q9HCM1 1747 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 CICQ96RK0 1608 aaPredicted RBP-1.17□□□□□ -2.6
RPGR-209ENST00000494707 D6R8Y8 96 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 ATOX1O00244 68 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 MUSTN1Q8IVN3 82 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 SERP2Q8N6R1 65 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 PMCHL2Q9BQD1 86 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 ACACAQ13085 2346 aa-1.17□□□□□ -2.6
RPGR-209ENST00000494707 RAPGEF2Q9Y4G8 1499 aa-1.18□□□□□ -2.6
RPGR-209ENST00000494707 ZZEF1O43149 2961 aa-1.18□□□□□ -2.6
RPGR-209ENST00000494707 CUX1P39880 1505 aa-1.18□□□□□ -2.6
RPGR-209ENST00000494707 PRDM15P57071 1507 aaPredicted RBP-1.18□□□□□ -2.6
RPGR-209ENST00000494707 MGAM2Q2M2H8 2515 aa-1.19□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms