RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 GYPEP15421 78 aa6.39□□□□□ -1.39
BRCA1-219ENST00000491747 RPL28P46779 137 aaKnown RBP6.39□□□□□ -1.39
BRCA1-219ENST00000491747 LYPD5Q6UWN5 251 aa6.39□□□□□ -1.39
BRCA1-219ENST00000491747 TMEM126AQ9H061 195 aa6.39□□□□□ -1.39
BRCA1-219ENST00000491747 DNAH17Q9UFH2 4485 aa6.39□□□□□ -1.39
BRCA1-219ENST00000491747 CFAP161Q6P656 301 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 SDIM1Q6ZPB5 146 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 SMCR5Q8TEV8 140 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 UPK3BQ9BT76 320 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 TMEM243Q9BU79 118 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 FAT2Q9NYQ8 4349 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 RTL8CO15255 209 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 DNAL4O96015 105 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 CXCL5P42830 114 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 SMIM20Q8N5G0 67 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 FAM218AQ96MZ4 157 aa6.38□□□□□ -1.39
BRCA1-219ENST00000491747 KRTAP1-5Q9BYS1 174 aa6.37□□□□□ -1.39
BRCA1-219ENST00000491747 NBDYA0A0U1RRE5 68 aa6.37□□□□□ -1.39
BRCA1-219ENST00000491747 TRBV6-4A0A1B0GX49 114 aa6.37□□□□□ -1.39
BRCA1-219ENST00000491747 MALP21145 153 aa6.37□□□□□ -1.39
BRCA1-219ENST00000491747 MIR7-3HGQ8N6C7 128 aa6.37□□□□□ -1.39
BRCA1-219ENST00000491747 COX7B2Q8TF08 81 aa6.37□□□□□ -1.39
BRCA1-219ENST00000491747 SND1-IT1Q9HBX3 110 aa6.37□□□□□ -1.39
BRCA1-219ENST00000491747 GAGE2AQ6NT46 116 aa6.36□□□□□ -1.39
BRCA1-219ENST00000491747 C22orf24Q9Y442 160 aa6.36□□□□□ -1.39
BRCA1-219ENST00000491747 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
BRCA1-219ENST00000491747 Q9HAA7 133 aa6.35□□□□□ -1.39
BRCA1-219ENST00000491747 PKD1P98161 4303 aa6.35□□□□□ -1.39
BRCA1-219ENST00000491747 H0YGX0 51 aa6.35□□□□□ -1.39
BRCA1-219ENST00000491747 UQCRQO14949 82 aa6.35□□□□□ -1.39
BRCA1-219ENST00000491747 TOMM7Q9P0U1 55 aa6.35□□□□□ -1.39
BRCA1-219ENST00000491747 IGKV2-28A0A075B6P5 120 aa6.34□□□□□ -1.39
BRCA1-219ENST00000491747 IGKV2D-28P01615 120 aa6.34□□□□□ -1.39
BRCA1-219ENST00000491747 LINC00158P58513 81 aa6.34□□□□□ -1.39
BRCA1-219ENST00000491747 C9orf153Q5TBE3 101 aa6.34□□□□□ -1.39
BRCA1-219ENST00000491747 C5orf38Q86SI9 138 aa6.34□□□□□ -1.39
BRCA1-219ENST00000491747 WFDC10BQ8IUB3 73 aa6.34□□□□□ -1.39
BRCA1-219ENST00000491747 C3orf22Q8N5N4 141 aa6.34□□□□□ -1.39
BRCA1-219ENST00000491747 C1orf134Q5TEV5 83 aa6.33□□□□□ -1.4
BRCA1-219ENST00000491747 HECTD4Q9Y4D8 3996 aa6.33□□□□□ -1.4
BRCA1-219ENST00000491747 IBA57-AS1B1ANH7 110 aa6.33□□□□□ -1.4
BRCA1-219ENST00000491747 SMIM11BQ8TCY0 68 aa6.33□□□□□ -1.4
BRCA1-219ENST00000491747 IGHV3OR16-9A0A0B4J2B5 98 aa6.32□□□□□ -1.4
BRCA1-219ENST00000491747 IGKV3OR2-268A0A0C4DH90 116 aa6.32□□□□□ -1.4
BRCA1-219ENST00000491747 A0A1B0GVY2 172 aa6.32□□□□□ -1.4
BRCA1-219ENST00000491747 C6orf223Q8N319 242 aa6.32□□□□□ -1.4
BRCA1-219ENST00000491747 LINC00526Q96FQ7 95 aa6.32□□□□□ -1.4
BRCA1-219ENST00000491747 A0A087WYN8 130 aa6.31□□□□□ -1.4
BRCA1-219ENST00000491747 LINC00336Q6ZUF6 198 aa6.31□□□□□ -1.4
BRCA1-219ENST00000491747 A0A087WZ39 114 aa6.31□□□□□ -1.4
BRCA1-219ENST00000491747 TRBV6-8A0A0A6YYG3 113 aa6.31□□□□□ -1.4
BRCA1-219ENST00000491747 ATOX1O00244 68 aa6.31□□□□□ -1.4
BRCA1-219ENST00000491747 BIRC6Q9NR09 4857 aa6.31□□□□□ -1.4
BRCA1-219ENST00000491747 COX7CP15954 63 aa6.3□□□□□ -1.4
BRCA1-219ENST00000491747 TNP2Q05952 138 aa6.3□□□□□ -1.4
BRCA1-219ENST00000491747 IGLV4-60A0A075B6I1 120 aa6.3□□□□□ -1.4
BRCA1-219ENST00000491747 DNAH10OSP0CZ25 163 aa6.3□□□□□ -1.4
BRCA1-219ENST00000491747 HIST1H4AP62805 103 aaKnown RBP6.3□□□□□ -1.4
BRCA1-219ENST00000491747 OBSCN-AS1Q96MR7 158 aa6.3□□□□□ -1.4
BRCA1-219ENST00000491747 C14orf132Q9NPU4 83 aa6.3□□□□□ -1.4
BRCA1-219ENST00000491747 DNAH11Q96DT5 4516 aa6.29□□□□□ -1.4
BRCA1-219ENST00000491747 LECT2O14960 151 aa6.29□□□□□ -1.4
BRCA1-219ENST00000491747 PFN2P35080 140 aa6.29□□□□□ -1.4
BRCA1-219ENST00000491747 LELP1Q5T871 98 aa6.29□□□□□ -1.4
BRCA1-219ENST00000491747 Q8N3U1 123 aa6.29□□□□□ -1.4
BRCA1-219ENST00000491747 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
BRCA1-219ENST00000491747 OR13C6PQ8NH95 151 aa6.29□□□□□ -1.4
BRCA1-219ENST00000491747 Q6JHZ5 121 aa6.28□□□□□ -1.4
BRCA1-219ENST00000491747 C6orf226Q5I0X4 101 aa6.28□□□□□ -1.4
BRCA1-219ENST00000491747 ORMDL1Q9P0S3 153 aa6.28□□□□□ -1.4
BRCA1-219ENST00000491747 CRYGAP11844 174 aa6.27□□□□□ -1.41
BRCA1-219ENST00000491747 RPL18AQ02543 176 aaKnown RBP6.27□□□□□ -1.41
BRCA1-219ENST00000491747 LINC01556Q5JQF7 62 aa6.27□□□□□ -1.41
BRCA1-219ENST00000491747 C9orf129Q5T035 196 aaKnown RBP6.27□□□□□ -1.41
BRCA1-219ENST00000491747 PKHD1P08F94 4074 aa6.27□□□□□ -1.41
BRCA1-219ENST00000491747 LINC00959A0A1B0GUT2 108 aa6.26□□□□□ -1.41
BRCA1-219ENST00000491747 LINC00846Q9NV44 126 aa6.26□□□□□ -1.41
BRCA1-219ENST00000491747 C2orf48Q96LS8 159 aa6.26□□□□□ -1.41
BRCA1-219ENST00000491747 NCR3O14931 201 aa6.25□□□□□ -1.41
BRCA1-219ENST00000491747 A0A1B0GX51 115 aa6.25□□□□□ -1.41
BRCA1-219ENST00000491747 SS18Q15532 418 aa6.25□□□□□ -1.41
BRCA1-219ENST00000491747 Q8IZM0 81 aa6.25□□□□□ -1.41
BRCA1-219ENST00000491747 DYNC1H1Q14204 4646 aaKnown RBP6.25□□□□□ -1.41
BRCA1-219ENST00000491747 IGKV3D-7A0A0C4DH55 119 aa6.24□□□□□ -1.41
BRCA1-219ENST00000491747 JMJD7-PLA2G4BH0Y9G9 81 aa6.24□□□□□ -1.41
BRCA1-219ENST00000491747 S100A7L2Q5SY68 101 aa6.24□□□□□ -1.41
BRCA1-219ENST00000491747 XCL1P47992 114 aa6.24□□□□□ -1.41
BRCA1-219ENST00000491747 LINC01561Q8N1V8 128 aa6.24□□□□□ -1.41
BRCA1-219ENST00000491747 A0A1B0GUV1 79 aa6.23□□□□□ -1.41
BRCA1-219ENST00000491747 SLPIP03973 132 aa6.23□□□□□ -1.41
BRCA1-219ENST00000491747 CCKP06307 115 aa6.23□□□□□ -1.41
BRCA1-219ENST00000491747 SERP2Q8N6R1 65 aa6.23□□□□□ -1.41
BRCA1-219ENST00000491747 J3KT08 172 aa6.23□□□□□ -1.41
BRCA1-219ENST00000491747 TMEM256-PLSCR3K7ERE1 68 aa6.23□□□□□ -1.41
BRCA1-219ENST00000491747 LINC00167Q96N53 147 aa6.22□□□□□ -1.41
BRCA1-219ENST00000491747 hADV29S1A0JD25 119 aa6.22□□□□□ -1.41
BRCA1-219ENST00000491747 NDUFC2O95298 119 aa6.22□□□□□ -1.41
BRCA1-219ENST00000491747 KRTAP10-2P60368 255 aa6.22□□□□□ -1.41
BRCA1-219ENST00000491747 ATP5EP2Q5VTU8 51 aa6.22□□□□□ -1.41
BRCA1-219ENST00000491747 USP17L23D6RBM5 183 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms