RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 WFDC10AQ9H1F0 79 aa13.29□□□□□ -0.28
SNAPC3-206ENST00000490969 CLPSL2Q6UWE3 100 aa13.29□□□□□ -0.28
SNAPC3-206ENST00000490969 TRAV7A0A075B6U4 112 aa13.28□□□□□ -0.28
SNAPC3-206ENST00000490969 H7BZZ5 65 aa13.28□□□□□ -0.28
SNAPC3-206ENST00000490969 RBM3P98179 157 aaKnown RBP13.28□□□□□ -0.28
SNAPC3-206ENST00000490969 BCE1O60756 84 aa13.28□□□□□ -0.28
SNAPC3-206ENST00000490969 LINC00575Q6W349 94 aa13.27□□□□□ -0.29
SNAPC3-206ENST00000490969 TRRAPQ9Y4A5 3859 aa13.26□□□□□ -0.29
SNAPC3-206ENST00000490969 EPM2AB3EWF7 344 aa13.26□□□□□ -0.29
SNAPC3-206ENST00000490969 COX17Q14061 63 aa13.26□□□□□ -0.29
SNAPC3-206ENST00000490969 CSNK1G2-AS1Q8NCQ2 148 aa13.26□□□□□ -0.29
SNAPC3-206ENST00000490969 SERP1Q9Y6X1 66 aa13.26□□□□□ -0.29
SNAPC3-206ENST00000490969 LOC110117498A0A087WWA1 95 aa13.26□□□□□ -0.29
SNAPC3-206ENST00000490969 ZNF561-AS1K7EIQ3 104 aa13.25□□□□□ -0.29
SNAPC3-206ENST00000490969 LINC01547P58512 204 aaPredicted RBP13.25□□□□□ -0.29
SNAPC3-206ENST00000490969 A0A1B0GUV1 79 aa13.24□□□□□ -0.29
SNAPC3-206ENST00000490969 KIAA0087Q14695 138 aa13.24□□□□□ -0.29
SNAPC3-206ENST00000490969 LINC00482Q8N8I6 264 aa13.24□□□□□ -0.29
SNAPC3-206ENST00000490969 Q8NDZ9 215 aa13.24□□□□□ -0.29
SNAPC3-206ENST00000490969 M0R2N4 97 aa13.23□□□□□ -0.29
SNAPC3-206ENST00000490969 SPATA3Q8NHX4 192 aa13.23□□□□□ -0.29
SNAPC3-206ENST00000490969 LAMTOR3Q9UHA4 124 aa13.23□□□□□ -0.29
SNAPC3-206ENST00000490969 HAMPP81172 84 aa13.22□□□□□ -0.29
SNAPC3-206ENST00000490969 C9orf116Q5BN46 136 aaPredicted RBP13.22□□□□□ -0.29
SNAPC3-206ENST00000490969 GYPEP15421 78 aa13.22□□□□□ -0.29
SNAPC3-206ENST00000490969 CMC4P56277 68 aaPredicted RBP13.22□□□□□ -0.29
SNAPC3-206ENST00000490969 KLKP1Q107X0 134 aa13.22□□□□□ -0.29
SNAPC3-206ENST00000490969 C6orf223Q8N319 242 aa13.22□□□□□ -0.29
SNAPC3-206ENST00000490969 Q6ZVQ6 151 aa13.21□□□□□ -0.29
SNAPC3-206ENST00000490969 TRAV10A0A0B4J240 114 aa13.21□□□□□ -0.29
SNAPC3-206ENST00000490969 DEFB130BP0DP73 79 aa13.2□□□□□ -0.3
SNAPC3-206ENST00000490969 DEFB130AP0DP74 79 aa13.2□□□□□ -0.3
SNAPC3-206ENST00000490969 IGHV4-28A0A0C4DH34 117 aa13.19□□□□□ -0.3
SNAPC3-206ENST00000490969 C19orf73Q9NVV2 129 aa13.19□□□□□ -0.3
SNAPC3-206ENST00000490969 MRAPQ8TCY5 172 aa13.18□□□□□ -0.3
SNAPC3-206ENST00000490969 SNURFQ9Y675 71 aa13.18□□□□□ -0.3
SNAPC3-206ENST00000490969 CD164L2Q6UWJ8 174 aa13.18□□□□□ -0.3
SNAPC3-206ENST00000490969 LINC00269Q8N2A0 174 aa13.17□□□□□ -0.3
SNAPC3-206ENST00000490969 RMI2Q96E14 147 aa13.17□□□□□ -0.3
SNAPC3-206ENST00000490969 CXCL6P80162 114 aa13.16□□□□□ -0.3
SNAPC3-206ENST00000490969 FBN1P35555 2871 aaKnown RBP13.16□□□□□ -0.3
SNAPC3-206ENST00000490969 CHCHD10Q8WYQ3 142 aaPredicted RBP13.15□□□□□ -0.3
SNAPC3-206ENST00000490969 A0A096LPF7 62 aa13.15□□□□□ -0.3
SNAPC3-206ENST00000490969 IGLV10-54A0A075B6I4 117 aa13.14□□□□□ -0.31
SNAPC3-206ENST00000490969 C9orf66Q5T8R8 295 aa13.14□□□□□ -0.31
SNAPC3-206ENST00000490969 Q6ZQY7 126 aa13.14□□□□□ -0.31
SNAPC3-206ENST00000490969 F8WEM9 126 aa13.13□□□□□ -0.31
SNAPC3-206ENST00000490969 PDE6GP18545 87 aa13.13□□□□□ -0.31
SNAPC3-206ENST00000490969 Q8N3U1 123 aa13.12□□□□□ -0.31
SNAPC3-206ENST00000490969 LINC00336Q6ZUF6 198 aa13.11□□□□□ -0.31
SNAPC3-206ENST00000490969 LINC00612Q8N6U2 182 aa13.11□□□□□ -0.31
SNAPC3-206ENST00000490969 IGLV1-51P01701 117 aa13.1□□□□□ -0.31
SNAPC3-206ENST00000490969 MUC7Q8TAX7 377 aa13.1□□□□□ -0.31
SNAPC3-206ENST00000490969 IGLV6-57P01721 117 aa13.1□□□□□ -0.31
SNAPC3-206ENST00000490969 STAB1Q9NY15 2570 aa13.09□□□□□ -0.31
SNAPC3-206ENST00000490969 PRO0628Q9UI54 55 aa13.09□□□□□ -0.31
SNAPC3-206ENST00000490969 SMIM26A0A096LP01 95 aa13.09□□□□□ -0.31
SNAPC3-206ENST00000490969 C10orf25Q5T742 122 aa13.09□□□□□ -0.31
SNAPC3-206ENST00000490969 PRO0255Q9UI72 69 aa13.09□□□□□ -0.31
SNAPC3-206ENST00000490969 REG3AQ06141 175 aa13.08□□□□□ -0.32
SNAPC3-206ENST00000490969 FP248Q71RG6 208 aaPredicted RBP13.08□□□□□ -0.32
SNAPC3-206ENST00000490969 TM2D3Q9BRN9 247 aa13.08□□□□□ -0.32
SNAPC3-206ENST00000490969 H3BQ85 93 aa13.08□□□□□ -0.32
SNAPC3-206ENST00000490969 ANGP03950 147 aaKnown RBP13.08□□□□□ -0.32
SNAPC3-206ENST00000490969 UNQ6190/PRO20217Q6UXQ8 127 aa13.08□□□□□ -0.32
SNAPC3-206ENST00000490969 SCXQ7RTU7 201 aa13.07□□□□□ -0.32
SNAPC3-206ENST00000490969 TRBV7-4A0A0J9YYF1 115 aa13.06□□□□□ -0.32
SNAPC3-206ENST00000490969 NDUFC1O43677 76 aa13.06□□□□□ -0.32
SNAPC3-206ENST00000490969 NBEAL2Q6ZNJ1 2754 aa13.05□□□□□ -0.32
SNAPC3-206ENST00000490969 MAST4O15021 2626 aa13.05□□□□□ -0.32
SNAPC3-206ENST00000490969 SPAG11BQ08648 103 aa13.04□□□□□ -0.32
SNAPC3-206ENST00000490969 TRBV7-6A0A0J9YX20 115 aa13.02□□□□□ -0.33
SNAPC3-206ENST00000490969 MIFP14174 115 aa13.02□□□□□ -0.33
SNAPC3-206ENST00000490969 A0A0J9YWU9 116 aa13.01□□□□□ -0.33
SNAPC3-206ENST00000490969 IGHV4-30-4P0DP06 118 aa13.01□□□□□ -0.33
SNAPC3-206ENST00000490969 DIRC1Q969H9 104 aa13.01□□□□□ -0.33
SNAPC3-206ENST00000490969 PKD1L1Q8TDX9 2849 aa13.01□□□□□ -0.33
SNAPC3-206ENST00000490969 NREPQ16612 68 aa13.01□□□□□ -0.33
SNAPC3-206ENST00000490969 ATP5EP56381 51 aaPredicted RBP13□□□□□ -0.33
SNAPC3-206ENST00000490969 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13□□□□□ -0.33
SNAPC3-206ENST00000490969 LINC00474Q9P2X8 69 aa12.99□□□□□ -0.33
SNAPC3-206ENST00000490969 KRTAP24-1Q3LI83 254 aa12.98□□□□□ -0.33
SNAPC3-206ENST00000490969 X6R8D5 127 aa12.98□□□□□ -0.33
SNAPC3-206ENST00000490969 BPY2O14599 106 aa12.97□□□□□ -0.33
SNAPC3-206ENST00000490969 TMEM254Q8TBM7 123 aa12.97□□□□□ -0.33
SNAPC3-206ENST00000490969 COL6A5A8TX70 2615 aa12.97□□□□□ -0.33
SNAPC3-206ENST00000490969 ZNF73O43830 326 aaPredicted RBP12.96□□□□□ -0.33
SNAPC3-206ENST00000490969 COX7BP24311 80 aa12.96□□□□□ -0.33
SNAPC3-206ENST00000490969 XAGE1AQ9HD64 81 aa12.94□□□□□ -0.34
SNAPC3-206ENST00000490969 ERC2-IT1O76042 136 aa12.94□□□□□ -0.34
SNAPC3-206ENST00000490969 ELOF1P60002 83 aaKnown RBP12.93□□□□□ -0.34
SNAPC3-206ENST00000490969 C1orf43Q9BWL3 253 aa12.93□□□□□ -0.34
SNAPC3-206ENST00000490969 GVQW2A0A096LPI5 108 aaPredicted RBP12.92□□□□□ -0.34
SNAPC3-206ENST00000490969 C6orf48Q9UBA6 75 aa12.91□□□□□ -0.34
SNAPC3-206ENST00000490969 Q8N9L7 120 aa12.91□□□□□ -0.34
SNAPC3-206ENST00000490969 LYRM9A8MSI8 78 aa12.9□□□□□ -0.34
SNAPC3-206ENST00000490969 CMYA5Q8N3K9 4069 aa12.89□□□□□ -0.35
SNAPC3-206ENST00000490969 DEFB4AO15263 64 aa12.88□□□□□ -0.35
SNAPC3-206ENST00000490969 IGKV4-1P06312 121 aa12.88□□□□□ -0.35
SNAPC3-206ENST00000490969 KLK12Q9UKR0 248 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms