RNA–Protein interactions for RNA: ENST00000488971.1

KDM3A-213, Transcript of lysine demethylase 3A, humanhuman

TSL 3

Gene KDM3A, Length 975 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-213ENST00000488971 C10orf113Q5VZT2 155 aa1.68□□□□□ -2.14
KDM3A-213ENST00000488971 TMEM263Q8WUH6 116 aaKnown RBP1.68□□□□□ -2.14
KDM3A-213ENST00000488971 NHSL1Q5SYE7 1610 aa1.68□□□□□ -2.14
KDM3A-213ENST00000488971 DDX60LQ5H9U9 1706 aaKnown RBP1.68□□□□□ -2.14
KDM3A-213ENST00000488971 ERCC6L2Q5T890 1561 aa1.68□□□□□ -2.14
KDM3A-213ENST00000488971 BCORQ6W2J9 1755 aa1.67□□□□□ -2.14
KDM3A-213ENST00000488971 LRRC37A2A6NM11 1700 aa1.67□□□□□ -2.14
KDM3A-213ENST00000488971 SPINK7P58062 85 aa1.67□□□□□ -2.14
KDM3A-213ENST00000488971 SPATA8Q6RVD6 105 aa1.67□□□□□ -2.14
KDM3A-213ENST00000488971 KRTAP13-1Q8IUC0 172 aa1.67□□□□□ -2.14
KDM3A-213ENST00000488971 LINC00472Q9H8W2 130 aa1.67□□□□□ -2.14
KDM3A-213ENST00000488971 TSC2P49815 1807 aa1.67□□□□□ -2.14
KDM3A-213ENST00000488971 ZNF831Q5JPB2 1677 aa1.67□□□□□ -2.14
KDM3A-213ENST00000488971 IFI6P09912 130 aa1.66□□□□□ -2.14
KDM3A-213ENST00000488971 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.66□□□□□ -2.14
KDM3A-213ENST00000488971 WFDC9Q8NEX5 89 aa1.66□□□□□ -2.14
KDM3A-213ENST00000488971 DNAJC13O75165 2243 aa1.66□□□□□ -2.14
KDM3A-213ENST00000488971 SDK1Q7Z5N4 2213 aa1.66□□□□□ -2.14
KDM3A-213ENST00000488971 LY75O60449 1722 aa1.66□□□□□ -2.14
KDM3A-213ENST00000488971 RICTORQ6R327 1708 aa1.66□□□□□ -2.14
KDM3A-213ENST00000488971 DEPDC5O75140 1603 aa1.66□□□□□ -2.14
KDM3A-213ENST00000488971 PAPPA2Q9BXP8 1791 aa1.65□□□□□ -2.14
KDM3A-213ENST00000488971 MYO7AQ13402 2215 aa1.65□□□□□ -2.15
KDM3A-213ENST00000488971 TRAV21A0A0B4J279 112 aa1.65□□□□□ -2.15
KDM3A-213ENST00000488971 TRBV30A0A0K0K1B3 111 aa1.65□□□□□ -2.15
KDM3A-213ENST00000488971 KRTAP12-1P59990 96 aa1.65□□□□□ -2.15
KDM3A-213ENST00000488971 NREPQ16612 68 aa1.65□□□□□ -2.15
KDM3A-213ENST00000488971 C10orf99Q6UWK7 81 aa1.65□□□□□ -2.15
KDM3A-213ENST00000488971 INTS1Q8N201 2190 aaKnown RBP1.64□□□□□ -2.15
KDM3A-213ENST00000488971 NRAPQ86VF7 1730 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 TOGARAM1Q9Y4F4 1720 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 TRBV6-1A0A0K0K1D8 114 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 LINC01549A6NIU2 74 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 DEFB112Q30KQ8 113 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 UNQ6190/PRO20217Q6UXQ8 127 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 SMIM11BQ8TCY0 68 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 LMO7Q8WWI1 1683 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 DUOX1Q9NRD9 1551 aa1.64□□□□□ -2.15
KDM3A-213ENST00000488971 DOT1LQ8TEK3 1739 aa1.63□□□□□ -2.15
KDM3A-213ENST00000488971 NRXN3Q9Y4C0 1643 aa1.63□□□□□ -2.15
KDM3A-213ENST00000488971 HMGA1P17096 107 aaKnown RBP1.63□□□□□ -2.15
KDM3A-213ENST00000488971 GAFA1Q96PS6 74 aa1.63□□□□□ -2.15
KDM3A-213ENST00000488971 A0A1B0GU69 56 aa1.62□□□□□ -2.15
KDM3A-213ENST00000488971 NCR3O14931 201 aa1.62□□□□□ -2.15
KDM3A-213ENST00000488971 HAMPP81172 84 aa1.62□□□□□ -2.15
KDM3A-213ENST00000488971 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
KDM3A-213ENST00000488971 Q6ZRX8 168 aa1.62□□□□□ -2.15
KDM3A-213ENST00000488971 NCOA6Q14686 2063 aaPredicted RBP1.62□□□□□ -2.15
KDM3A-213ENST00000488971 FBN1P35555 2871 aaKnown RBP1.61□□□□□ -2.15
KDM3A-213ENST00000488971 GVQW2A0A096LPI5 108 aaPredicted RBP1.61□□□□□ -2.15
KDM3A-213ENST00000488971 LINC00575Q6W349 94 aa1.61□□□□□ -2.15
KDM3A-213ENST00000488971 RPS27LQ71UM5 84 aaKnown RBP1.61□□□□□ -2.15
KDM3A-213ENST00000488971 PLAC4Q8WY50 150 aa1.61□□□□□ -2.15
KDM3A-213ENST00000488971 KMT2BQ9UMN6 2715 aaPredicted RBP1.6□□□□□ -2.15
KDM3A-213ENST00000488971 MED13LQ71F56 2210 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 A0A0G2JMZ2 1700 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 LRRC37AA6NMS7 1700 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 A0A096LNT2 108 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 G3V318 75 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 PIN1P1O15428 100 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 FXYD6P3P58550 94 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 KRTAP12-3P60328 96 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 SERF2P84101 59 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 SPINK13Q1W4C9 94 aa1.6□□□□□ -2.15
KDM3A-213ENST00000488971 SORL1Q92673 2214 aa1.59□□□□□ -2.15
KDM3A-213ENST00000488971 SMIM27A0A1W2PRY6 76 aa1.59□□□□□ -2.15
KDM3A-213ENST00000488971 RPL38P63173 70 aaKnown RBP1.59□□□□□ -2.15
KDM3A-213ENST00000488971 SSC5DA1L4H1 1573 aa1.59□□□□□ -2.16
KDM3A-213ENST00000488971 LCE6AA0A183 80 aa1.58□□□□□ -2.16
KDM3A-213ENST00000488971 LY6G6CO95867 125 aa1.58□□□□□ -2.16
KDM3A-213ENST00000488971 ENHOQ6UWT2 76 aa1.58□□□□□ -2.16
KDM3A-213ENST00000488971 UBL5Q9BZL1 73 aa1.58□□□□□ -2.16
KDM3A-213ENST00000488971 J3QKU1 62 aa1.57□□□□□ -2.16
KDM3A-213ENST00000488971 FCER1GP30273 86 aa1.57□□□□□ -2.16
KDM3A-213ENST00000488971 SSBP3-AS1Q7Z2R9 100 aa1.57□□□□□ -2.16
KDM3A-213ENST00000488971 LINC00959A0A1B0GUT2 108 aa1.56□□□□□ -2.16
KDM3A-213ENST00000488971 K7EMI3 77 aa1.56□□□□□ -2.16
KDM3A-213ENST00000488971 SPINK4O60575 86 aa1.56□□□□□ -2.16
KDM3A-213ENST00000488971 COX7BP24311 80 aa1.56□□□□□ -2.16
KDM3A-213ENST00000488971 RPL37P61927 97 aaKnown RBP1.56□□□□□ -2.16
KDM3A-213ENST00000488971 ABCA1O95477 2261 aa1.56□□□□□ -2.16
KDM3A-213ENST00000488971 F5P12259 2224 aa1.55□□□□□ -2.16
KDM3A-213ENST00000488971 NDUFA4O00483 81 aa1.55□□□□□ -2.16
KDM3A-213ENST00000488971 CACNA1CQ13936 2221 aa1.54□□□□□ -2.16
KDM3A-213ENST00000488971 CPSF4LA6NMK7 179 aaKnown RBP1.53□□□□□ -2.16
KDM3A-213ENST00000488971 PLNP26678 52 aa1.53□□□□□ -2.16
KDM3A-213ENST00000488971 UBE2DNLQ8IWF7 75 aa1.53□□□□□ -2.16
KDM3A-213ENST00000488971 TIMM8BQ9Y5J9 83 aaPredicted RBP1.53□□□□□ -2.16
KDM3A-213ENST00000488971 PLXNB2O15031 1838 aa1.52□□□□□ -2.17
KDM3A-213ENST00000488971 LINC01546A6NGU7 62 aa1.52□□□□□ -2.17
KDM3A-213ENST00000488971 TTTY10Q9BZA0 68 aa1.52□□□□□ -2.17
KDM3A-213ENST00000488971 LOC730098B7Z3J9 87 aa1.51□□□□□ -2.17
KDM3A-213ENST00000488971 PRB1P04280 392 aa1.51□□□□□ -2.17
KDM3A-213ENST00000488971 ARL14EPLP0DKL9 152 aa1.51□□□□□ -2.17
KDM3A-213ENST00000488971 KRTAP12-4P60329 112 aa1.51□□□□□ -2.17
KDM3A-213ENST00000488971 TMEM167BQ9NRX6 74 aa1.51□□□□□ -2.17
KDM3A-213ENST00000488971 ASCC3Q8N3C0 2202 aaKnown RBP1.51□□□□□ -2.17
KDM3A-213ENST00000488971 SPTY2D1-AS1A0A0U1RR47 76 aa1.5□□□□□ -2.17
KDM3A-213ENST00000488971 COX6B1P14854 86 aa1.5□□□□□ -2.17
KDM3A-213ENST00000488971 DEFB119Q8N690 84 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms