RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 LOC100131303A0A0U1RQF7 123 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 PSPHP1O15172 72 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 IGHV4-59P01825 116 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 UBE2AP49459 152 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 PRR3P79522 188 aaKnown RBP3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 KIAA0087Q14695 138 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 LINC00612Q8N6U2 182 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 Q8NDZ9 215 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 LINC01006Q8NI28 216 aa3.18□□□□□ -1.9
CDC42BPA-213ENST00000488131 TRGV1A0A0A0MS02 117 aa3.17□□□□□ -1.9
CDC42BPA-213ENST00000488131 A0A1B0GW54 56 aa3.17□□□□□ -1.9
CDC42BPA-213ENST00000488131 M0R378 163 aa3.17□□□□□ -1.9
CDC42BPA-213ENST00000488131 VPREB1P12018 145 aa3.17□□□□□ -1.9
CDC42BPA-213ENST00000488131 HMCN1Q96RW7 5635 aa3.17□□□□□ -1.9
CDC42BPA-213ENST00000488131 ASPMQ8IZT6 3477 aa3.17□□□□□ -1.9
CDC42BPA-213ENST00000488131 TRGV2A0A075B6R0 118 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 IGHV4-61A0A0C4DH41 118 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 A6NN06 94 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 A8MUN3 132 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 H3BUX3 64 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 ELOF1P60002 83 aaKnown RBP3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 LCE1EQ5T753 118 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 KRTAP5-4Q6L8H1 288 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 ATP11AUNQ6ZP68 121 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 ABCA2Q9BZC7 2435 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 COL6A6A6NMZ7 2263 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 IGLV5-37A0A075B6J1 123 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 A0A1B0GUV1 79 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 LY6EQ16553 131 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 Q8N9L7 120 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 DIRC1Q969H9 104 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 LIMD2Q9BT23 127 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 BOD1L1Q8NFC6 3051 aa3.16□□□□□ -1.9
CDC42BPA-213ENST00000488131 AKAP13Q12802 2813 aa3.15□□□□□ -1.9
CDC42BPA-213ENST00000488131 HRNRQ86YZ3 2850 aaPredicted RBP3.15□□□□□ -1.9
CDC42BPA-213ENST00000488131 EP300Q09472 2414 aaPredicted RBP3.15□□□□□ -1.91
CDC42BPA-213ENST00000488131 TRGV4A0A0C4DH28 118 aa3.15□□□□□ -1.91
CDC42BPA-213ENST00000488131 C16orf90A8MZG2 172 aa3.15□□□□□ -1.91
CDC42BPA-213ENST00000488131 NDUFB1O75438 58 aa3.15□□□□□ -1.91
CDC42BPA-213ENST00000488131 BRD3OSQ6XYD6 125 aa3.15□□□□□ -1.91
CDC42BPA-213ENST00000488131 SMIM29Q86T20 159 aa3.15□□□□□ -1.91
CDC42BPA-213ENST00000488131 LINC00269Q8N2A0 174 aa3.15□□□□□ -1.91
CDC42BPA-213ENST00000488131 NCOR1O75376 2440 aa3.14□□□□□ -1.91
CDC42BPA-213ENST00000488131 IGKV3OR2-268A0A0C4DH90 116 aa3.14□□□□□ -1.91
CDC42BPA-213ENST00000488131 ETDCA0A1B0GVM5 59 aa3.14□□□□□ -1.91
CDC42BPA-213ENST00000488131 A8MU10 97 aa3.14□□□□□ -1.91
CDC42BPA-213ENST00000488131 UBE2E2Q96LR5 201 aa3.14□□□□□ -1.91
CDC42BPA-213ENST00000488131 Q9BRP9 147 aa3.14□□□□□ -1.91
CDC42BPA-213ENST00000488131 A0A0J9YWU9 116 aa3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 LRCOL1A6NCL2 159 aa3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 ZNF73O43830 326 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 APOC4P55056 127 aa3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 SPANXA2-OT1Q8N9U9 137 aa3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 BSNQ9UPA5 3926 aa3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 SORL1Q92673 2214 aa3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 LOC101927531A0A1B0GV80 90 aa3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 C7orf65Q6ZTY9 151 aa3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 Q8N9P0 234 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-213ENST00000488131 TRIOBPQ9H2D6 2365 aa3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 GVQW2A0A096LPI5 108 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 HIGD2BQ4VC39 106 aa3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 C10orf99Q6UWK7 81 aa3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 C16orf74Q96GX8 76 aa3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 KRTAP1-5Q9BYS1 174 aa3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 KCNQ1DNQ9H478 68 aa3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 LRBAP50851 2863 aa3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 PTPRZ1P23471 2315 aaPredicted RBP3.12□□□□□ -1.91
CDC42BPA-213ENST00000488131 IGLV5-48A0A075B6I7 105 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 A0A1W2PPR1 153 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 HCG22E2RYF7 251 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 CHKB-CPT1BH3BT56 60 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 IGKV2-30P06310 120 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 KRTAP5-1Q6L8H4 278 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 LCA10Q71F78 164 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 B9D2Q9BPU9 175 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 CDC42SE1Q9NRR8 79 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.11□□□□□ -1.913e-11■■■□□ 16.9
CDC42BPA-213ENST00000488131 ANKRD11Q6UB99 2663 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 DSCR9P59020 149 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 C9orf116Q5BN46 136 aaPredicted RBP3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 DEFB124Q8NES8 71 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 NOP10Q9NPE3 64 aaKnown RBP3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 KLK12Q9UKR0 248 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 AKAP6Q13023 2319 aa3.11□□□□□ -1.91
CDC42BPA-213ENST00000488131 WNK1Q9H4A3 2382 aa3.1□□□□□ -1.91
CDC42BPA-213ENST00000488131 C8orf87E5RJ46 101 aa3.1□□□□□ -1.91
CDC42BPA-213ENST00000488131 CSNK1G2-AS1Q8NCQ2 148 aa3.1□□□□□ -1.91
CDC42BPA-213ENST00000488131 C11orf45Q8TAV5 145 aa3.1□□□□□ -1.91
CDC42BPA-213ENST00000488131 LINC00208Q96KT6 92 aa3.1□□□□□ -1.91
CDC42BPA-213ENST00000488131 RELNP78509 3460 aa3.1□□□□□ -1.91
CDC42BPA-213ENST00000488131 CR1P17927 2039 aa3.1□□□□□ -1.91
CDC42BPA-213ENST00000488131 H3BPC8 53 aa3.09□□□□□ -1.91
CDC42BPA-213ENST00000488131 PRB1P04280 392 aa3.09□□□□□ -1.91
CDC42BPA-213ENST00000488131 ST20-AS1Q8NBB2 130 aa3.09□□□□□ -1.91
CDC42BPA-213ENST00000488131 CHCHD10Q8WYQ3 142 aaPredicted RBP3.09□□□□□ -1.91
CDC42BPA-213ENST00000488131 PRR15LQ9BU68 103 aa3.09□□□□□ -1.91
CDC42BPA-213ENST00000488131 SVEP1Q4LDE5 3571 aa3.09□□□□□ -1.92
CDC42BPA-213ENST00000488131 C3orf84H3BNL1 204 aa3.09□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms