RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TIMM17AQ99595 171 aa7.56□□□□□ -1.2
SREBF1-215ENST00000487401 ATOH7Q8N100 152 aa7.55□□□□□ -1.2
SREBF1-215ENST00000487401 SCGB3A1Q96QR1 104 aa7.55□□□□□ -1.2
SREBF1-215ENST00000487401 CDKN2A-AS1Q9UH64 79 aa7.55□□□□□ -1.2
SREBF1-215ENST00000487401 RNF213Q63HN8 5207 aa7.55□□□□□ -1.2
SREBF1-215ENST00000487401 COL5A1-AS1Q5SY13 56 aa7.54□□□□□ -1.2
SREBF1-215ENST00000487401 LINC01545Q5VT33 79 aa7.54□□□□□ -1.2
SREBF1-215ENST00000487401 ERASQ7Z444 233 aa7.54□□□□□ -1.2
SREBF1-215ENST00000487401 F8VRH5 84 aa7.53□□□□□ -1.2
SREBF1-215ENST00000487401 XAGE1AQ9HD64 81 aa7.53□□□□□ -1.2
SREBF1-215ENST00000487401 C22orf24Q9Y442 160 aa7.53□□□□□ -1.2
SREBF1-215ENST00000487401 IGLV1-50A0A075B6I6 118 aa7.52□□□□□ -1.21
SREBF1-215ENST00000487401 LINC01546A6NGU7 62 aa7.52□□□□□ -1.21
SREBF1-215ENST00000487401 HSBP1L1C9JCN9 74 aa7.52□□□□□ -1.21
SREBF1-215ENST00000487401 CXCL5P42830 114 aa7.52□□□□□ -1.21
SREBF1-215ENST00000487401 LINC01549A6NIU2 74 aa7.51□□□□□ -1.21
SREBF1-215ENST00000487401 BATFQ16520 125 aa7.51□□□□□ -1.21
SREBF1-215ENST00000487401 A0A096LNJ9 63 aa7.5□□□□□ -1.21
SREBF1-215ENST00000487401 TINCRA0A1B0GVN0 87 aa7.5□□□□□ -1.21
SREBF1-215ENST00000487401 ZNF861PO60384 105 aa7.5□□□□□ -1.21
SREBF1-215ENST00000487401 COX7B2Q8TF08 81 aa7.5□□□□□ -1.21
SREBF1-215ENST00000487401 PMCHL2Q9BQD1 86 aa7.5□□□□□ -1.21
SREBF1-215ENST00000487401 SMIM1B2RUZ4 78 aa7.49□□□□□ -1.21
SREBF1-215ENST00000487401 DLEU1O43261 78 aa7.49□□□□□ -1.21
SREBF1-215ENST00000487401 HBDP02042 147 aa7.49□□□□□ -1.21
SREBF1-215ENST00000487401 RPL13AP40429 203 aaKnown RBP7.49□□□□□ -1.21
SREBF1-215ENST00000487401 SLC25A34Q6PIV7 304 aa7.49□□□□□ -1.21
SREBF1-215ENST00000487401 CST9LQ9H4G1 147 aa7.49□□□□□ -1.21
SREBF1-215ENST00000487401 KRTAP1-4P0C5Y4 121 aa7.48□□□□□ -1.21
SREBF1-215ENST00000487401 MRPL55Q7Z7F7 128 aaKnown RBP7.48□□□□□ -1.21
SREBF1-215ENST00000487401 TP73-AS1Q9UF72 201 aa7.48□□□□□ -1.21
SREBF1-215ENST00000487401 IGLV5-45A0A087WSX0 123 aa7.47□□□□□ -1.21
SREBF1-215ENST00000487401 SPINK8P0C7L1 97 aa7.47□□□□□ -1.21
SREBF1-215ENST00000487401 HINT1P49773 126 aaPredicted RBP7.47□□□□□ -1.21
SREBF1-215ENST00000487401 PMVKQ15126 192 aa7.47□□□□□ -1.21
SREBF1-215ENST00000487401 IFI27L1Q96BM0 104 aa7.47□□□□□ -1.21
SREBF1-215ENST00000487401 H3BRM9 83 aa7.46□□□□□ -1.22
SREBF1-215ENST00000487401 COX8AP10176 69 aa7.46□□□□□ -1.22
SREBF1-215ENST00000487401 H0Y8G0 127 aa7.45□□□□□ -1.22
SREBF1-215ENST00000487401 BCE1O60756 84 aa7.45□□□□□ -1.22
SREBF1-215ENST00000487401 RPL28P46779 137 aaKnown RBP7.45□□□□□ -1.22
SREBF1-215ENST00000487401 RPL37AP8A6NKH3 93 aa7.44□□□□□ -1.22
SREBF1-215ENST00000487401 ATP5LO75964 103 aa7.44□□□□□ -1.22
SREBF1-215ENST00000487401 LINC00167Q96N53 147 aa7.44□□□□□ -1.22
SREBF1-215ENST00000487401 LPAP08519 4548 aa7.43□□□□□ -1.22
SREBF1-215ENST00000487401 GAGE10A6NGK3 116 aa7.43□□□□□ -1.22
SREBF1-215ENST00000487401 BVES-AS1Q5T3Y7 98 aa7.43□□□□□ -1.22
SREBF1-215ENST00000487401 NKAPP1Q8N9T2 125 aa7.43□□□□□ -1.22
SREBF1-215ENST00000487401 PRR4Q16378 134 aa7.42□□□□□ -1.22
SREBF1-215ENST00000487401 ANKRD39Q53RE8 183 aa7.42□□□□□ -1.22
SREBF1-215ENST00000487401 C2orf91Q6ZV80 131 aa7.41□□□□□ -1.22
SREBF1-215ENST00000487401 BOD1L2Q8IYS8 172 aa7.41□□□□□ -1.22
SREBF1-215ENST00000487401 IGLV5-37A0A075B6J1 123 aa7.4□□□□□ -1.22
SREBF1-215ENST00000487401 PFN2P35080 140 aa7.4□□□□□ -1.22
SREBF1-215ENST00000487401 UBE2AP49459 152 aa7.4□□□□□ -1.22
SREBF1-215ENST00000487401 CRYGAP11844 174 aa7.39□□□□□ -1.23
SREBF1-215ENST00000487401 IGLV5-39A0A0G2JS06 123 aa7.38□□□□□ -1.23
SREBF1-215ENST00000487401 TAX1BP3O14907 124 aa7.38□□□□□ -1.23
SREBF1-215ENST00000487401 TSPAN13O95857 204 aa7.38□□□□□ -1.23
SREBF1-215ENST00000487401 UBE2V1Q13404 147 aa7.38□□□□□ -1.23
SREBF1-215ENST00000487401 TYMSOSQ8TAI1 123 aa7.38□□□□□ -1.23
SREBF1-215ENST00000487401 IGKV2-28A0A075B6P5 120 aa7.37□□□□□ -1.23
SREBF1-215ENST00000487401 DPM2O94777 84 aa7.37□□□□□ -1.23
SREBF1-215ENST00000487401 IGKV2D-28P01615 120 aa7.37□□□□□ -1.23
SREBF1-215ENST00000487401 IGKCP01834 107 aa7.37□□□□□ -1.23
SREBF1-215ENST00000487401 ZNF22P17026 224 aaPredicted RBP7.37□□□□□ -1.23
SREBF1-215ENST00000487401 HSD52Q0P140 79 aa7.37□□□□□ -1.23
SREBF1-215ENST00000487401 ERG28Q9UKR5 140 aa7.37□□□□□ -1.23
SREBF1-215ENST00000487401 A0A087X002 238 aa7.36□□□□□ -1.23
SREBF1-215ENST00000487401 RPL24P83731 157 aaKnown RBP7.36□□□□□ -1.23
SREBF1-215ENST00000487401 COX17Q14061 63 aa7.36□□□□□ -1.23
SREBF1-215ENST00000487401 TMEM170BQ5T4T1 132 aa7.36□□□□□ -1.23
SREBF1-215ENST00000487401 Q6ZVH6 145 aa7.36□□□□□ -1.23
SREBF1-215ENST00000487401 SND1-IT1Q9HBX3 110 aa7.36□□□□□ -1.23
SREBF1-215ENST00000487401 TRAV12-1A0A0B4J245 112 aa7.35□□□□□ -1.23
SREBF1-215ENST00000487401 ZNF625Q96I27 306 aaPredicted RBP7.35□□□□□ -1.23
SREBF1-215ENST00000487401 ANAPC11Q9NYG5 84 aa7.35□□□□□ -1.23
SREBF1-215ENST00000487401 HIGD1BQ9P298 99 aa7.35□□□□□ -1.23
SREBF1-215ENST00000487401 VAMP3Q15836 100 aa7.34□□□□□ -1.23
SREBF1-215ENST00000487401 SFTA2Q6UW10 78 aa7.34□□□□□ -1.23
SREBF1-215ENST00000487401 KRTAP13-1Q8IUC0 172 aa7.34□□□□□ -1.23
SREBF1-215ENST00000487401 PCP2Q8IVA1 136 aa7.34□□□□□ -1.23
SREBF1-215ENST00000487401 A6NDN8 102 aa7.33□□□□□ -1.24
SREBF1-215ENST00000487401 C11orf86A6NJI1 115 aa7.33□□□□□ -1.24
SREBF1-215ENST00000487401 VPREB1P12018 145 aa7.33□□□□□ -1.24
SREBF1-215ENST00000487401 NMUP48645 174 aa7.33□□□□□ -1.24
SREBF1-215ENST00000487401 PLNP26678 52 aa7.32□□□□□ -1.24
SREBF1-215ENST00000487401 LINC00158P58513 81 aa7.32□□□□□ -1.24
SREBF1-215ENST00000487401 FAM229BQ4G0N7 80 aa7.32□□□□□ -1.24
SREBF1-215ENST00000487401 FAM19A1Q7Z5A9 133 aa7.32□□□□□ -1.24
SREBF1-215ENST00000487401 CHTOPQ9Y3Y2 248 aaKnown RBP7.32□□□□□ -1.24
SREBF1-215ENST00000487401 IGKV2D-26A0A0A0MRZ7 120 aa7.31□□□□□ -1.24
SREBF1-215ENST00000487401 TMEM238C9JI98 176 aa7.31□□□□□ -1.24
SREBF1-215ENST00000487401 TMEM126AQ9H061 195 aa7.31□□□□□ -1.24
SREBF1-215ENST00000487401 C9orf118A6NHY6 69 aa7.3□□□□□ -1.24
SREBF1-215ENST00000487401 PRLHP81277 87 aa7.3□□□□□ -1.24
SREBF1-215ENST00000487401 KRTAP13-2Q52LG2 175 aa7.3□□□□□ -1.24
SREBF1-215ENST00000487401 TAL2Q16559 108 aa7.29□□□□□ -1.24
SREBF1-215ENST00000487401 A0A0U1RRA0 63 aa7.28□□□□□ -1.24
SREBF1-215ENST00000487401 M0R378 163 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms