RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 TRGV2A0A075B6R0 118 aa2.52□□□□□ -2.01
LMBR1-218ENST00000486837 A0A087WSZ3 146 aa2.52□□□□□ -2.01
LMBR1-218ENST00000486837 DEFB108AA8MXU0 73 aa2.52□□□□□ -2.01
LMBR1-218ENST00000486837 P0C880 135 aa2.52□□□□□ -2.01
LMBR1-218ENST00000486837 Q8TAT8 98 aa2.52□□□□□ -2.01
LMBR1-218ENST00000486837 KCNQ1DNQ9H478 68 aa2.52□□□□□ -2.01
LMBR1-218ENST00000486837 KNTC1P50748 2209 aa2.52□□□□□ -2.01
LMBR1-218ENST00000486837 ALPK2Q86TB3 2170 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 M0R2N4 97 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 MGPP08493 103 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 SPAG11BQ08648 103 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 SPAG11AQ6PDA7 123 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 LEAP2Q969E1 77 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 R4GN34 69 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 SPAG17Q6Q759 2223 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 ZGRF1Q86YA3 2104 aa2.51□□□□□ -2.01
LMBR1-218ENST00000486837 UNC13CQ8NB66 2214 aa2.5□□□□□ -2.01
LMBR1-218ENST00000486837 H0Y9P7 68 aa2.5□□□□□ -2.01
LMBR1-218ENST00000486837 I3L2K1 104 aa2.5□□□□□ -2.01
LMBR1-218ENST00000486837 KRTAP10-1P60331 282 aa2.5□□□□□ -2.01
LMBR1-218ENST00000486837 SPATA8Q6RVD6 105 aa2.5□□□□□ -2.01
LMBR1-218ENST00000486837 GAFA1Q96PS6 74 aa2.5□□□□□ -2.01
LMBR1-218ENST00000486837 PRR14LQ5THK1 2151 aa2.5□□□□□ -2.01
LMBR1-218ENST00000486837 MUC4Q99102 2169 aa2.49□□□□□ -2.01
LMBR1-218ENST00000486837 IGKV3D-11A0A0A0MRZ8 115 aa2.49□□□□□ -2.01
LMBR1-218ENST00000486837 LINC00959A0A1B0GUT2 108 aa2.49□□□□□ -2.01
LMBR1-218ENST00000486837 TRBV6-4A0A1B0GX49 114 aa2.49□□□□□ -2.01
LMBR1-218ENST00000486837 LCE1CQ5T751 118 aa2.49□□□□□ -2.01
LMBR1-218ENST00000486837 LCE1BQ5T7P3 118 aa2.49□□□□□ -2.01
LMBR1-218ENST00000486837 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.49□□□□□ -2.01
LMBR1-218ENST00000486837 COA5Q86WW8 74 aa2.49□□□□□ -2.01
LMBR1-218ENST00000486837 A0A096LNT2 108 aa2.48□□□□□ -2.01
LMBR1-218ENST00000486837 COX7BP24311 80 aa2.48□□□□□ -2.01
LMBR1-218ENST00000486837 LINC00575Q6W349 94 aa2.48□□□□□ -2.01
LMBR1-218ENST00000486837 C9orf163Q8N9P6 203 aa2.48□□□□□ -2.01
LMBR1-218ENST00000486837 CDKN2A-AS1Q9UH64 79 aa2.48□□□□□ -2.01
LMBR1-218ENST00000486837 USF3Q68DE3 2245 aa2.48□□□□□ -2.01
LMBR1-218ENST00000486837 CUL9Q8IWT3 2517 aa2.47□□□□□ -2.01
LMBR1-218ENST00000486837 TRGV4A0A0C4DH28 118 aa2.47□□□□□ -2.01
LMBR1-218ENST00000486837 M0QY20 66 aa2.47□□□□□ -2.01
LMBR1-218ENST00000486837 RNASE3P12724 160 aaKnown RBP2.47□□□□□ -2.01
LMBR1-218ENST00000486837 HRES1P13985 223 aa2.47□□□□□ -2.01
LMBR1-218ENST00000486837 CCL18P55774 89 aa2.47□□□□□ -2.01
LMBR1-218ENST00000486837 C20orf166-AS1Q96NR2 134 aa2.47□□□□□ -2.01
LMBR1-218ENST00000486837 SPRR4Q96PI1 79 aa2.47□□□□□ -2.01
LMBR1-218ENST00000486837 DNAJC13O75165 2243 aa2.47□□□□□ -2.01
LMBR1-218ENST00000486837 LINC00158P58513 81 aa2.46□□□□□ -2.02
LMBR1-218ENST00000486837 DEFB112Q30KQ8 113 aa2.46□□□□□ -2.02
LMBR1-218ENST00000486837 C1orf137Q5JT78 98 aa2.46□□□□□ -2.02
LMBR1-218ENST00000486837 C10orf55Q5SWW7 151 aa2.46□□□□□ -2.02
LMBR1-218ENST00000486837 LINC00304Q8N9R0 145 aa2.46□□□□□ -2.02
LMBR1-218ENST00000486837 MALRD1Q5VYJ5 2156 aa2.46□□□□□ -2.02
LMBR1-218ENST00000486837 SEC16AO15027 2179 aa2.45□□□□□ -2.02
LMBR1-218ENST00000486837 DOCK10Q96BY6 2186 aa2.45□□□□□ -2.02
LMBR1-218ENST00000486837 K7EIM0 57 aa2.45□□□□□ -2.02
LMBR1-218ENST00000486837 PRB1P04280 392 aa2.45□□□□□ -2.02
LMBR1-218ENST00000486837 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.45□□□□□ -2.02
LMBR1-218ENST00000486837 IGLV10-54A0A075B6I4 117 aa2.44□□□□□ -2.02
LMBR1-218ENST00000486837 COX6A2Q02221 97 aa2.44□□□□□ -2.02
LMBR1-218ENST00000486837 DEFB113Q30KQ7 82 aa2.44□□□□□ -2.02
LMBR1-218ENST00000486837 KRTAP26-1Q6PEX3 210 aa2.44□□□□□ -2.02
LMBR1-218ENST00000486837 SDK2Q58EX2 2172 aa2.44□□□□□ -2.02
LMBR1-218ENST00000486837 PRB3Q04118 309 aaPredicted RBP2.43□□□□□ -2.02
LMBR1-218ENST00000486837 TNCP24821 2201 aa2.42□□□□□ -2.02
LMBR1-218ENST00000486837 ODF3BA8MYP8 253 aa2.42□□□□□ -2.02
LMBR1-218ENST00000486837 UQCR11O14957 56 aa2.42□□□□□ -2.02
LMBR1-218ENST00000486837 Q6ZQY7 126 aa2.42□□□□□ -2.02
LMBR1-218ENST00000486837 DMAC1Q96GE9 116 aa2.42□□□□□ -2.02
LMBR1-218ENST00000486837 ZFHX3Q15911 3703 aa2.42□□□□□ -2.02
LMBR1-218ENST00000486837 IGKV3-7A0A075B6H7 116 aa2.41□□□□□ -2.02
LMBR1-218ENST00000486837 NUPR2A6NF83 97 aa2.41□□□□□ -2.02
LMBR1-218ENST00000486837 DEFB104AQ8WTQ1 72 aa2.41□□□□□ -2.02
LMBR1-218ENST00000486837 PSORS1C2Q9UIG4 136 aa2.41□□□□□ -2.02
LMBR1-218ENST00000486837 DIDO1Q9BTC0 2240 aaKnown RBP2.41□□□□□ -2.02
LMBR1-218ENST00000486837 CR1P17927 2039 aa2.41□□□□□ -2.02
LMBR1-218ENST00000486837 F5P12259 2224 aa2.4□□□□□ -2.03
LMBR1-218ENST00000486837 CADP27708 2225 aa2.4□□□□□ -2.03
LMBR1-218ENST00000486837 IGKV2-24A0A0C4DH68 120 aa2.4□□□□□ -2.03
LMBR1-218ENST00000486837 CCL3L1P16619 93 aa2.4□□□□□ -2.03
LMBR1-218ENST00000486837 DEFB110Q30KQ9 67 aa2.4□□□□□ -2.03
LMBR1-218ENST00000486837 DEFB131BA0A096LNP1 70 aa2.39□□□□□ -2.03
LMBR1-218ENST00000486837 KLK9Q2XQG4 91 aa2.39□□□□□ -2.03
LMBR1-218ENST00000486837 Q8IZM0 81 aa2.39□□□□□ -2.03
LMBR1-218ENST00000486837 MRPL33O75394 65 aaKnown RBP2.38□□□□□ -2.03
LMBR1-218ENST00000486837 KIAA0100Q14667 2235 aaKnown RBP2.38□□□□□ -2.03
LMBR1-218ENST00000486837 IGKV3OR2-268A0A0C4DH90 116 aa2.37□□□□□ -2.03
LMBR1-218ENST00000486837 IGLV6-57P01721 117 aa2.37□□□□□ -2.03
LMBR1-218ENST00000486837 CD52P31358 61 aa2.37□□□□□ -2.03
LMBR1-218ENST00000486837 LINC00472Q9H8W2 130 aa2.37□□□□□ -2.03
LMBR1-218ENST00000486837 CCL26Q9Y258 94 aa2.37□□□□□ -2.03
LMBR1-218ENST00000486837 ZFHX2Q9C0A1 2572 aaPredicted RBP2.37□□□□□ -2.03
LMBR1-218ENST00000486837 PDE4DIPQ5VU43 2346 aa2.36□□□□□ -2.03
LMBR1-218ENST00000486837 RP1P56715 2156 aa2.36□□□□□ -2.03
LMBR1-218ENST00000486837 IGLV5-48A0A075B6I7 105 aa2.36□□□□□ -2.03
LMBR1-218ENST00000486837 COX17Q14061 63 aa2.36□□□□□ -2.03
LMBR1-218ENST00000486837 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
LMBR1-218ENST00000486837 PRRC2BQ5JSZ5 2229 aaKnown RBP2.36□□□□□ -2.03
LMBR1-218ENST00000486837 RTTNQ86VV8 2226 aa2.36□□□□□ -2.03
LMBR1-218ENST00000486837 A0A087WTM6 91 aa2.35□□□□□ -2.03
LMBR1-218ENST00000486837 A0A1W2PNN7 141 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms