RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 RPL37AP61513 92 aaKnown RBP7.41□□□□□ -1.22
APTX-227ENST00000485479 ANKRD39Q53RE8 183 aa7.41□□□□□ -1.22
APTX-227ENST00000485479 Q8NDZ9 215 aa7.41□□□□□ -1.22
APTX-227ENST00000485479 PLEKHB2Q96CS7 222 aa7.41□□□□□ -1.22
APTX-227ENST00000485479 SND1-IT1Q9HBX3 110 aa7.41□□□□□ -1.22
APTX-227ENST00000485479 MYCBP2O75592 4640 aa7.41□□□□□ -1.22
APTX-227ENST00000485479 NMUP48645 174 aa7.4□□□□□ -1.23
APTX-227ENST00000485479 HNRNPA3P51991 378 aaKnown RBP7.4□□□□□ -1.23
APTX-227ENST00000485479 MYMXA0A1B0GTQ4 84 aa7.39□□□□□ -1.23
APTX-227ENST00000485479 NPC2P61916 151 aa7.39□□□□□ -1.23
APTX-227ENST00000485479 MIR7-3HGQ8N6C7 128 aa7.39□□□□□ -1.23
APTX-227ENST00000485479 C7orf33Q8WU49 177 aa7.39□□□□□ -1.23
APTX-227ENST00000485479 GAGE10A6NGK3 116 aa7.39□□□□□ -1.23
APTX-227ENST00000485479 TP73-AS1Q9UF72 201 aa7.39□□□□□ -1.23
APTX-227ENST00000485479 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
APTX-227ENST00000485479 SCGB1D1O95968 90 aa7.38□□□□□ -1.23
APTX-227ENST00000485479 PLA2G1BP04054 148 aaKnown RBP7.37□□□□□ -1.23
APTX-227ENST00000485479 C22orf24Q9Y442 160 aa7.37□□□□□ -1.23
APTX-227ENST00000485479 RPL37AP8A6NKH3 93 aa7.37□□□□□ -1.23
APTX-227ENST00000485479 ZNF815PA8K554 130 aa7.37□□□□□ -1.23
APTX-227ENST00000485479 HERV-K104P63124 156 aa7.37□□□□□ -1.23
APTX-227ENST00000485479 COX17Q14061 63 aa7.37□□□□□ -1.23
APTX-227ENST00000485479 SFTA2Q6UW10 78 aa7.37□□□□□ -1.23
APTX-227ENST00000485479 PCP2Q8IVA1 136 aa7.37□□□□□ -1.23
APTX-227ENST00000485479 A0A0J9YXY3 114 aa7.36□□□□□ -1.23
APTX-227ENST00000485479 UBE2BP63146 152 aa7.36□□□□□ -1.23
APTX-227ENST00000485479 PRR3P79522 188 aaKnown RBP7.36□□□□□ -1.23
APTX-227ENST00000485479 ADAMTSL4-AS1Q5T5F5 129 aa7.36□□□□□ -1.23
APTX-227ENST00000485479 PSORS1C2Q9UIG4 136 aa7.36□□□□□ -1.23
APTX-227ENST00000485479 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
APTX-227ENST00000485479 LRP1Q07954 4544 aaKnown RBP7.35□□□□□ -1.23
APTX-227ENST00000485479 IGKV2-28A0A075B6P5 120 aa7.34□□□□□ -1.23
APTX-227ENST00000485479 IGKV2D-28P01615 120 aa7.34□□□□□ -1.23
APTX-227ENST00000485479 INAFM2P0DMQ5 153 aa7.34□□□□□ -1.23
APTX-227ENST00000485479 VPREB1P12018 145 aa7.34□□□□□ -1.23
APTX-227ENST00000485479 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.23
APTX-227ENST00000485479 BOD1L2Q8IYS8 172 aa7.34□□□□□ -1.23
APTX-227ENST00000485479 J3QL48 77 aa7.33□□□□□ -1.24
APTX-227ENST00000485479 C1orf137Q5JT78 98 aa7.33□□□□□ -1.24
APTX-227ENST00000485479 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
APTX-227ENST00000485479 NCR3O14931 201 aa7.33□□□□□ -1.24
APTX-227ENST00000485479 SOSTDC1Q6X4U4 206 aa7.33□□□□□ -1.24
APTX-227ENST00000485479 LINC00167Q96N53 147 aa7.33□□□□□ -1.24
APTX-227ENST00000485479 LITAFQ99732 161 aa7.32□□□□□ -1.24
APTX-227ENST00000485479 SCGB1D4Q6XE38 83 aa7.31□□□□□ -1.24
APTX-227ENST00000485479 HSBP1L1C9JCN9 74 aa7.3□□□□□ -1.24
APTX-227ENST00000485479 SMCPP49901 116 aaPredicted RBP7.3□□□□□ -1.24
APTX-227ENST00000485479 PLA2G2DQ9UNK4 145 aa7.3□□□□□ -1.24
APTX-227ENST00000485479 PAM16Q9Y3D7 125 aa7.29□□□□□ -1.24
APTX-227ENST00000485479 LINC00587B1AMM8 73 aa7.29□□□□□ -1.24
APTX-227ENST00000485479 MIEN1Q9BRT3 115 aa7.29□□□□□ -1.24
APTX-227ENST00000485479 IGLV5-37A0A075B6J1 123 aa7.28□□□□□ -1.24
APTX-227ENST00000485479 TMEM238C9JI98 176 aa7.28□□□□□ -1.24
APTX-227ENST00000485479 PYY3Q5JQD4 70 aa7.28□□□□□ -1.24
APTX-227ENST00000485479 AKR1D1P51857 326 aa7.28□□□□□ -1.24
APTX-227ENST00000485479 RPL24P83731 157 aaKnown RBP7.28□□□□□ -1.24
APTX-227ENST00000485479 JOSD1Q15040 202 aaPredicted RBP7.28□□□□□ -1.24
APTX-227ENST00000485479 LBHQ53QV2 105 aaPredicted RBP7.28□□□□□ -1.24
APTX-227ENST00000485479 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.25
APTX-227ENST00000485479 LINC00308Q8TCZ7 52 aa7.26□□□□□ -1.25
APTX-227ENST00000485479 C14orf144Q96I85 54 aa7.26□□□□□ -1.25
APTX-227ENST00000485479 IGLV1-50A0A075B6I6 118 aa7.26□□□□□ -1.25
APTX-227ENST00000485479 IGLV7-43P04211 117 aa7.26□□□□□ -1.25
APTX-227ENST00000485479 SPATA45Q537H7 98 aa7.26□□□□□ -1.25
APTX-227ENST00000485479 FAT3Q8TDW7 4589 aa7.25□□□□□ -1.25
APTX-227ENST00000485479 TRBV10-3A0A0K0K1G6 114 aa7.24□□□□□ -1.25
APTX-227ENST00000485479 VAMP8Q9BV40 100 aa7.24□□□□□ -1.25
APTX-227ENST00000485479 M0R378 163 aa7.24□□□□□ -1.25
APTX-227ENST00000485479 TIMM17BO60830 172 aa7.24□□□□□ -1.25
APTX-227ENST00000485479 PRLHP81277 87 aa7.24□□□□□ -1.25
APTX-227ENST00000485479 LCE2AQ5TA79 106 aaPredicted RBP7.24□□□□□ -1.25
APTX-227ENST00000485479 LOC107984156A0A0G2JMH3 177 aa7.23□□□□□ -1.25
APTX-227ENST00000485479 SRSF9Q13242 221 aaKnown RBP eCLIP7.23□□□□□ -1.25
APTX-227ENST00000485479 C4orf48Q5BLP8 95 aa7.23□□□□□ -1.25
APTX-227ENST00000485479 ARL17AQ8IVW1 177 aa7.23□□□□□ -1.25
APTX-227ENST00000485479 TMEM126AQ9H061 195 aa7.23□□□□□ -1.25
APTX-227ENST00000485479 MUSTN1Q8IVN3 82 aa7.22□□□□□ -1.25
APTX-227ENST00000485479 BCE1O60756 84 aa7.21□□□□□ -1.26
APTX-227ENST00000485479 COX8AP10176 69 aa7.21□□□□□ -1.26
APTX-227ENST00000485479 REG3GQ6UW15 175 aa7.21□□□□□ -1.26
APTX-227ENST00000485479 SPANXDQ9BXN6 97 aa7.21□□□□□ -1.26
APTX-227ENST00000485479 SPANXCQ9NY87 97 aa7.21□□□□□ -1.26
APTX-227ENST00000485479 DDTP30046 118 aa7.2□□□□□ -1.26
APTX-227ENST00000485479 FAM19A1Q7Z5A9 133 aa7.2□□□□□ -1.26
APTX-227ENST00000485479 SPANXB1Q9NS25 103 aaPredicted RBP7.2□□□□□ -1.26
APTX-227ENST00000485479 SPINK6Q6UWN8 80 aa7.2□□□□□ -1.26
APTX-227ENST00000485479 HERC1Q15751 4861 aa7.2□□□□□ -1.26
APTX-227ENST00000485479 UBE2AP49459 152 aa7.19□□□□□ -1.26
APTX-227ENST00000485479 S100A7L2Q5SY68 101 aa7.19□□□□□ -1.26
APTX-227ENST00000485479 ZNF861PO60384 105 aa7.19□□□□□ -1.26
APTX-227ENST00000485479 NDUFC2O95298 119 aa7.19□□□□□ -1.26
APTX-227ENST00000485479 LINC00337Q8N6G1 96 aa7.19□□□□□ -1.26
APTX-227ENST00000485479 OR13C6PQ8NH95 151 aa7.19□□□□□ -1.26
APTX-227ENST00000485479 H0Y9J4 135 aa7.17□□□□□ -1.26
APTX-227ENST00000485479 C12orf57Q99622 126 aa7.17□□□□□ -1.26
APTX-227ENST00000485479 TRBV10-2A0A0K0K1G8 114 aa7.17□□□□□ -1.26
APTX-227ENST00000485479 IGLV6-57P01721 117 aa7.17□□□□□ -1.26
APTX-227ENST00000485479 KRTAP13-1Q8IUC0 172 aa7.17□□□□□ -1.26
APTX-227ENST00000485479 KCNQ1DNQ9H478 68 aa7.17□□□□□ -1.26
APTX-227ENST00000485479 SLC25A34Q6PIV7 304 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms