RNA–Protein interactions for RNA: ENST00000485365.1

SFPQ-208, Transcript of splicing factor proline and glutamine rich, human

TSL 2

Gene SFPQ, Length 693 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SFPQ-208	ENST00000485365	PMCHL2	Q9BQD1	86 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365	VPS25	Q9BRG1	176 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365	UBE2D4	Q9Y2X8	147 aa		3.02	□□□□□ -1.93
SFPQ-208	ENST00000485365	DYNC1H1	Q14204	4646 aa	Known RBP	3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	IGHV3-64	A0A075B6Q5	118 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	IGKV2-24	A0A0C4DH68	120 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	COX7A2L	O14548	114 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	COX8A	P10176	69 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	IFI27	P40305	119 aa	Predicted RBP	3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	OCIAD2	Q56VL3	154 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	LINC01545	Q5VT33	79 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	KRTAP26-1	Q6PEX3	210 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365		Q8N377	158 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365		Q8N8P6	123 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	MAP1LC3C	Q9BXW4	147 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	HSPB8	Q9UJY1	196 aa		3.01	□□□□□ -1.93
SFPQ-208	ENST00000485365	IGHV1-58	A0A0C4DH39	117 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	APOM	O95445	188 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	CHTF8	P0CG12	524 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	COX6A2	Q02221	97 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	SRSF9	Q13242	221 aa	Known RBP eCLIP	3	□□□□□ -1.93
SFPQ-208	ENST00000485365	ORMDL2	Q53FV1	153 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	CD164L2	Q6UWJ8	174 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	C2orf66	Q6UXQ4	117 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	FA2H	Q7L5A8	372 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	SCX	Q7RTU7	201 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	C15orf56	Q8N910	161 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	C9orf163	Q8N9P6	203 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	CIRBP-AS1	Q8TBR5	109 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	CAMK2N2	Q96S95	79 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	NAA38	Q9BRA0	125 aa	Known RBP	3	□□□□□ -1.93
SFPQ-208	ENST00000485365	CHAC1	Q9BUX1	264 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	VCX2	Q9H322	139 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	SPANXA1	Q9NS26	97 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	CYSLTR1	Q9Y271	337 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	LRP1B	Q9NZR2	4599 aa		3	□□□□□ -1.93
SFPQ-208	ENST00000485365	PKHD1	P08F94	4074 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	DNAH5	Q8TE73	4624 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	IGLV4-69	A0A075B6H9	119 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365		A0A087WZ39	114 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365		A0A096LNJ9	63 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365		A0A0J9YXV3	536 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365		K7EP34	96 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	RPL32	P62910	135 aa	Known RBP	2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	SEC11A	P67812	179 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	SYCN	Q0VAF6	134 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	SDIM1	Q6ZPB5	146 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	TMEM141	Q96I45	108 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	CARD19	Q96LW7	228 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	SCGB3A1	Q96QR1	104 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	NXT2	Q9NPJ8	142 aa	Known RBP	2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	TOMM7	Q9P0U1	55 aa		2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	CSDC2	Q9Y534	153 aa	Known RBP	2.99	□□□□□ -1.93
SFPQ-208	ENST00000485365	IGLV4-3	A0A075B6K6	122 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365		H3BRM9	83 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365		H3BUT2	72 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	PANO1	I0J062	215 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365		K7ERU9	68 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	RPL37A	P61513	92 aa	Known RBP	2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	CNBP	P62633	177 aa	Known RBP	2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	RPL18A	Q02543	176 aa	Known RBP	2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	SPAG11B	Q08648	103 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	HSD52	Q0P140	79 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	RAB37	Q96AX2	223 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	TIMM21	Q9BVV7	248 aa		2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	GEMIN7	Q9H840	131 aa	Known RBP	2.98	□□□□□ -1.93
SFPQ-208	ENST00000485365	KIAA1109	Q2LD37	5005 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	GVQW2	A0A096LPI5	108 aa	Predicted RBP	2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365		A6NDN8	102 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	TMEM238	C9JI98	176 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365		K7ERJ3	54 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	MRPS36	P82909	103 aa	Known RBP	2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	C6orf226	Q5I0X4	101 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365		Q6ZRU5	148 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	GTF2H5	Q6ZYL4	71 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	PCP2	Q8IVA1	136 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	BOD1L2	Q8IYS8	172 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	C7orf33	Q8WU49	177 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365	SPCS1	Q9Y6A9	102 aa		2.97	□□□□□ -1.93
SFPQ-208	ENST00000485365		A0A096LNI7	61 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	LOC107984640	A0A0U1RRK4	108 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365		A0A1W2PPM0	123 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	NDUFA1	O15239	70 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	HBD	P02042	147 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	NMU	P48645	174 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	UBE2D1	P51668	147 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	CKS1B	P61024	79 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	LINC00242	Q5T6M2	205 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	UNQ6190/PRO20217	Q6UXQ8	127 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365		Q6ZSA8	131 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	TOMM6	Q96B49	74 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	IFI27L1	Q96BM0	104 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	HERC2	O95714	4834 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	HSPG2	P98160	4391 aa		2.96	□□□□□ -1.94
SFPQ-208	ENST00000485365	IGKV2D-26	A0A0A0MRZ7	120 aa		2.95	□□□□□ -1.94
SFPQ-208	ENST00000485365	IGHV3OR16-9	A0A0B4J2B5	98 aa		2.95	□□□□□ -1.94
SFPQ-208	ENST00000485365	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	2.95	□□□□□ -1.94
SFPQ-208	ENST00000485365		K7EMI3	77 aa		2.95	□□□□□ -1.94
SFPQ-208	ENST00000485365	FXYD2	P54710	66 aa		2.95	□□□□□ -1.94
SFPQ-208	ENST00000485365	C2orf82	Q6UX34	121 aa		2.95	□□□□□ -1.94

Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms