RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 IGKV2D-28P01615 120 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST1H2BJP06899 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 KRTAP1-4P0C5Y4 121 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST1H2BOP23527 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST1H2BBP33778 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST1H2BDP58876 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST1H2BCP62807 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HERV-K104P63124 156 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST2H2BEQ16778 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 MEIG1Q5JSS6 88 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST1H2BHQ93079 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST1H2BNQ99877 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HIST1H2BMQ99879 126 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 PMCHL2Q9BQD1 86 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 NDUFA12Q9UI09 145 aa11.27□□□□□ -0.61
HSPG2-210ENST00000481644 HMCN2Q8NDA2 5059 aa11.26□□□□□ -0.61
HSPG2-210ENST00000481644 ATP6V1G1O75348 118 aa11.26□□□□□ -0.61
HSPG2-210ENST00000481644 SMIM13P0DJ93 91 aa11.26□□□□□ -0.61
HSPG2-210ENST00000481644 MAP1LC3CQ9BXW4 147 aa11.26□□□□□ -0.61
HSPG2-210ENST00000481644 MYMXA0A1B0GTQ4 84 aa11.25□□□□□ -0.61
HSPG2-210ENST00000481644 Q8NDZ9 215 aa11.25□□□□□ -0.61
HSPG2-210ENST00000481644 IGLV1-50A0A075B6I6 118 aa11.24□□□□□ -0.61
HSPG2-210ENST00000481644 LEPROTO15243 131 aa11.24□□□□□ -0.61
HSPG2-210ENST00000481644 IGKCP01834 107 aa11.24□□□□□ -0.61
HSPG2-210ENST00000481644 HERVK_113P61574 105 aa11.24□□□□□ -0.61
HSPG2-210ENST00000481644 PLEKHB2Q96CS7 222 aa11.24□□□□□ -0.61
HSPG2-210ENST00000481644 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
HSPG2-210ENST00000481644 UBE2AP49459 152 aa11.23□□□□□ -0.61
HSPG2-210ENST00000481644 TSPEAR-AS2P59090 65 aa11.23□□□□□ -0.61
HSPG2-210ENST00000481644 MIR7-3HGQ8N6C7 128 aa11.22□□□□□ -0.61
HSPG2-210ENST00000481644 J3QQQ9 107 aa11.2□□□□□ -0.62
HSPG2-210ENST00000481644 TMEM126AQ9H061 195 aa11.2□□□□□ -0.62
HSPG2-210ENST00000481644 TMEM238C9JI98 176 aa11.19□□□□□ -0.62
HSPG2-210ENST00000481644 RPL13AP40429 203 aaKnown RBP11.19□□□□□ -0.62
HSPG2-210ENST00000481644 KRTAP13-1Q8IUC0 172 aa11.19□□□□□ -0.62
HSPG2-210ENST00000481644 BOD1L2Q8IYS8 172 aa11.19□□□□□ -0.62
HSPG2-210ENST00000481644 SYS1-DBNDD2H3BUS1 97 aa11.18□□□□□ -0.62
HSPG2-210ENST00000481644 LGALS3P17931 250 aaKnown RBP11.18□□□□□ -0.62
HSPG2-210ENST00000481644 FAM19A1Q7Z5A9 133 aa11.18□□□□□ -0.62
HSPG2-210ENST00000481644 M0R378 163 aa11.17□□□□□ -0.62
HSPG2-210ENST00000481644 NMUP48645 174 aa11.17□□□□□ -0.62
HSPG2-210ENST00000481644 PRLHP81277 87 aa11.16□□□□□ -0.62
HSPG2-210ENST00000481644 NCR3O14931 201 aa11.15□□□□□ -0.62
HSPG2-210ENST00000481644 DAND5Q8N907 189 aa11.14□□□□□ -0.63
HSPG2-210ENST00000481644 E9PLD3 99 aa11.13□□□□□ -0.63
HSPG2-210ENST00000481644 COA6Q5JTJ3 125 aaKnown RBP11.13□□□□□ -0.63
HSPG2-210ENST00000481644 IGKV2D-26A0A0A0MRZ7 120 aa11.12□□□□□ -0.63
HSPG2-210ENST00000481644 LINC01545Q5VT33 79 aa11.12□□□□□ -0.63
HSPG2-210ENST00000481644 PET117Q6UWS5 81 aa11.12□□□□□ -0.63
HSPG2-210ENST00000481644 A0A087X002 238 aa11.11□□□□□ -0.63
HSPG2-210ENST00000481644 CRYGAP11844 174 aa11.11□□□□□ -0.63
HSPG2-210ENST00000481644 LOC107984156A0A0G2JMH3 177 aa11.1□□□□□ -0.63
HSPG2-210ENST00000481644 ARL17AQ8IVW1 177 aa11.1□□□□□ -0.63
HSPG2-210ENST00000481644 PRYO14603 147 aa11.09□□□□□ -0.63
HSPG2-210ENST00000481644 C3orf79P0CE67 100 aa11.09□□□□□ -0.63
HSPG2-210ENST00000481644 MIEN1Q9BRT3 115 aa11.09□□□□□ -0.63
HSPG2-210ENST00000481644 ANAPC11Q9NYG5 84 aa11.09□□□□□ -0.63
HSPG2-210ENST00000481644 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
HSPG2-210ENST00000481644 KRTDAPP60985 99 aa11.07□□□□□ -0.64
HSPG2-210ENST00000481644 TYMSOSQ8TAI1 123 aa11.07□□□□□ -0.64
HSPG2-210ENST00000481644 HIGD2AQ9BW72 106 aa11.07□□□□□ -0.64
HSPG2-210ENST00000481644 KCNQ1DNQ9H478 68 aa11.07□□□□□ -0.64
HSPG2-210ENST00000481644 TRBV10-3A0A0K0K1G6 114 aa11.06□□□□□ -0.64
HSPG2-210ENST00000481644 FAM229BQ4G0N7 80 aa11.06□□□□□ -0.64
HSPG2-210ENST00000481644 S100A12P80511 92 aa11.05□□□□□ -0.64
HSPG2-210ENST00000481644 TRBV10-2A0A0K0K1G8 114 aa11.04□□□□□ -0.64
HSPG2-210ENST00000481644 SPRR1AP35321 89 aa11.04□□□□□ -0.64
HSPG2-210ENST00000481644 LINC00337Q8N6G1 96 aa11.04□□□□□ -0.64
HSPG2-210ENST00000481644 SPANXB1Q9NS25 103 aaPredicted RBP11.04□□□□□ -0.64
HSPG2-210ENST00000481644 ETDCA0A1B0GVM5 59 aa11.03□□□□□ -0.64
HSPG2-210ENST00000481644 S100A1P23297 94 aa11.03□□□□□ -0.64
HSPG2-210ENST00000481644 NPC2P61916 151 aa11.03□□□□□ -0.64
HSPG2-210ENST00000481644 ADAMTSL4-AS1Q5T5F5 129 aa11.03□□□□□ -0.64
HSPG2-210ENST00000481644 C20orf202A1L168 122 aa11.02□□□□□ -0.65
HSPG2-210ENST00000481644 NDUFC2O95298 119 aa11.02□□□□□ -0.65
HSPG2-210ENST00000481644 DDTP30046 118 aa11.02□□□□□ -0.65
HSPG2-210ENST00000481644 KRTAP13-2Q52LG2 175 aa11.02□□□□□ -0.65
HSPG2-210ENST00000481644 ZNF815PA8K554 130 aa11.01□□□□□ -0.65
HSPG2-210ENST00000481644 SOSTDC1Q6X4U4 206 aa11.01□□□□□ -0.65
HSPG2-210ENST00000481644 UBR4Q5T4S7 5183 aa11□□□□□ -0.65
HSPG2-210ENST00000481644 KRTAP4-16G5E9R7 235 aaPredicted RBP11□□□□□ -0.65
HSPG2-210ENST00000481644 EIF4EBP3O60516 100 aaPredicted RBP10.99□□□□□ -0.65
HSPG2-210ENST00000481644 TSPAN13O95857 204 aa10.99□□□□□ -0.65
HSPG2-210ENST00000481644 S100A7L2Q5SY68 101 aa10.99□□□□□ -0.65
HSPG2-210ENST00000481644 TIMM17BO60830 172 aa10.98□□□□□ -0.65
HSPG2-210ENST00000481644 SPRR4Q96PI1 79 aa10.98□□□□□ -0.65
HSPG2-210ENST00000481644 LITAFQ99732 161 aa10.98□□□□□ -0.65
HSPG2-210ENST00000481644 TTTY13Q9BZ97 58 aa10.98□□□□□ -0.65
HSPG2-210ENST00000481644 ZNF706Q9Y5V0 76 aaPredicted RBP10.98□□□□□ -0.65
HSPG2-210ENST00000481644 IGLV6-57P01721 117 aa10.96□□□□□ -0.65
HSPG2-210ENST00000481644 LINC00308Q8TCZ7 52 aa10.96□□□□□ -0.65
HSPG2-210ENST00000481644 SMCR5Q8TEV8 140 aa10.96□□□□□ -0.65
HSPG2-210ENST00000481644 LRP2P98164 4655 aa10.96□□□□□ -0.66
HSPG2-210ENST00000481644 B5MCH6 92 aa10.95□□□□□ -0.66
HSPG2-210ENST00000481644 ATOH7Q8N100 152 aa10.95□□□□□ -0.66
HSPG2-210ENST00000481644 AKR1D1P51857 326 aa10.94□□□□□ -0.66
HSPG2-210ENST00000481644 PRR4Q16378 134 aa10.94□□□□□ -0.66
HSPG2-210ENST00000481644 LINC00304Q8N9R0 145 aa10.94□□□□□ -0.66
HSPG2-210ENST00000481644 SPANXCQ9NY87 97 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms