RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 CKS1BP61024 79 aa3.04□□□□□ -1.92
PTCD3-213ENST00000480102 SRSF9Q13242 221 aaKnown RBP eCLIP3.04□□□□□ -1.92
PTCD3-213ENST00000480102 COA6Q5JTJ3 125 aaKnown RBP3.04□□□□□ -1.92
PTCD3-213ENST00000480102 SPINK6Q6UWN8 80 aa3.04□□□□□ -1.92
PTCD3-213ENST00000480102 LINC00469Q8N7U9 141 aa3.04□□□□□ -1.92
PTCD3-213ENST00000480102 CHTOPQ9Y3Y2 248 aaKnown RBP3.04□□□□□ -1.92
PTCD3-213ENST00000480102 C11orf86A6NJI1 115 aa3.03□□□□□ -1.92
PTCD3-213ENST00000480102 HSBP1O75506 76 aa3.03□□□□□ -1.92
PTCD3-213ENST00000480102 CHTF8P0CG12 524 aa3.03□□□□□ -1.92
PTCD3-213ENST00000480102 AKR1D1P51857 326 aa3.03□□□□□ -1.92
PTCD3-213ENST00000480102 CTAG1AP78358 180 aa3.03□□□□□ -1.92
PTCD3-213ENST00000480102 PRR3P79522 188 aaKnown RBP3.03□□□□□ -1.92
PTCD3-213ENST00000480102 C9orf116Q5BN46 136 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-213ENST00000480102 UNQ6190/PRO20217Q6UXQ8 127 aa3.03□□□□□ -1.92
PTCD3-213ENST00000480102 DPH3Q96FX2 82 aa3.03□□□□□ -1.92
PTCD3-213ENST00000480102 ZNF625Q96I27 306 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-213ENST00000480102 HSPB8Q9UJY1 196 aa3.03□□□□□ -1.92
PTCD3-213ENST00000480102 PKHD1L1Q86WI1 4243 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 IGKV2-24A0A0C4DH68 120 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 LOC107984156A0A0G2JMH3 177 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 A0A1W2PNN7 141 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 NUPR1O60356 82 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 TRGC2P03986 189 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 ZNF22P17026 224 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-213ENST00000480102 PLNP26678 52 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 BAGE3Q86Y29 109 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 CBLN2Q8IUK8 224 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 ARL17AQ8IVW1 177 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 COX7B2Q8TF08 81 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 IFI27L1Q96BM0 104 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 LINC01600Q96MT4 127 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 HMCN2Q8NDA2 5059 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 TNXBP22105 4242 aa3.02□□□□□ -1.93
PTCD3-213ENST00000480102 LEPROTL1O95214 131 aa3.01□□□□□ -1.93
PTCD3-213ENST00000480102 NMUP48645 174 aa3.01□□□□□ -1.93
PTCD3-213ENST00000480102 RPL18AQ02543 176 aaKnown RBP3.01□□□□□ -1.93
PTCD3-213ENST00000480102 C9orf129Q5T035 196 aaKnown RBP3.01□□□□□ -1.93
PTCD3-213ENST00000480102 REG3GQ6UW15 175 aa3.01□□□□□ -1.93
PTCD3-213ENST00000480102 IGKV2D-26A0A0A0MRZ7 120 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 TMEM223A0PJW6 202 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 SERF1AO75920 110 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 SEC61GP60059 68 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 HAMPP81172 84 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 C2orf82Q6UX34 121 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 KRTAP7-1Q8IUC3 87 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 SLC7A5P1Q8MH63 180 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 PPDPFQ9H3Y8 114 aa3□□□□□ -1.93
PTCD3-213ENST00000480102 FLG2Q5D862 2391 aaPredicted RBP3□□□□□ -1.93
PTCD3-213ENST00000480102 PCP4L1A6NKN8 68 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 H0Y9J4 135 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 M0QXV9 152 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 IGLV7-43P04211 117 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 S100A1P23297 94 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 KRTAP10-8P60410 259 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 ZC2HC1BQ5TFG8 222 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 MRPL55Q7Z7F7 128 aaKnown RBP2.99□□□□□ -1.93
PTCD3-213ENST00000480102 DIRC1Q969H9 104 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 TOMM7Q9P0U1 55 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 PSORS1C2Q9UIG4 136 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 C22orf24Q9Y442 160 aa2.99□□□□□ -1.93
PTCD3-213ENST00000480102 IGLV1-50A0A075B6I6 118 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 ZNF861PO60384 105 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BKO60814 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 DPM2O94777 84 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BJP06899 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 SPINK8P0C7L1 97 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 MT1HL1P0DM35 61 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BOP23527 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BBP33778 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HNRNPA3P51991 378 aaKnown RBP2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BDP58876 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BCP62807 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST2H2BEQ16778 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.98□□□□□ -1.93
PTCD3-213ENST00000480102 TMEM170BQ5T4T1 132 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BHQ93079 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 PLEKHB2Q96CS7 222 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BNQ99877 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 HIST1H2BMQ99879 126 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 MAP1LC3CQ9BXW4 147 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 ERG28Q9UKR5 140 aa2.98□□□□□ -1.93
PTCD3-213ENST00000480102 TRBV10-2A0A0K0K1G8 114 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 MYMXA0A1B0GTQ4 84 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 E9PLD3 99 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 SYS1-DBNDD2H3BUS1 97 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 LEPROTO15243 131 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 BCE1O60756 84 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 RPL13AP40429 203 aaKnown RBP2.97□□□□□ -1.93
PTCD3-213ENST00000480102 HERVK_113P61574 105 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 PMCHL1Q16048 86 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 KRTAP13-1Q8IUC0 172 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 SND1-IT1Q9HBX3 110 aa2.97□□□□□ -1.93
PTCD3-213ENST00000480102 TIMM17BO60830 172 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 NDUFC2O95298 119 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 IGKCP01834 107 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 RPL28P46779 137 aaKnown RBP2.96□□□□□ -1.94
PTCD3-213ENST00000480102 NDUFA6P56556 154 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 C1orf137Q5JT78 98 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 LINC01545Q5VT33 79 aa2.96□□□□□ -1.94
PTCD3-213ENST00000480102 PHF5AQ7RTV0 110 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms