RNA–Protein interactions for RNA: ENST00000478016.1

FNDC3B-209, Transcript of fibronectin type III domain containing 3B, humanhuman

TSL 4

Gene FNDC3B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-209ENST00000478016 CSAG1Q6PB30 78 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 ZCCHC13Q8WW36 166 aaKnown RBP2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 LINC00846Q9NV44 126 aa2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 SPTAN1Q13813 2472 aaKnown RBP2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 UTP20O75691 2785 aaKnown RBP2.17□□□□□ -2.06
FNDC3B-209ENST00000478016 DOPEY2Q9Y3R5 2298 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 MALRD1Q5VYJ5 2156 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 HEATR5BQ9P2D3 2071 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 MYO9AB2RTY4 2548 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 IGKV3D-7A0A0C4DH55 119 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 PRB4P10163 310 aaPredicted RBP2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 DEFB109BQ30KR1 87 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 DMAC1Q96GE9 116 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 C16orf74Q96GX8 76 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 ZFHX3Q15911 3703 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 USP9XQ93008 2570 aaPredicted RBP2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 UNC79Q9P2D8 2635 aa2.16□□□□□ -2.06
FNDC3B-209ENST00000478016 TEX15Q9BXT5 2789 aa2.15□□□□□ -2.06
FNDC3B-209ENST00000478016 CSMD2Q7Z408 3487 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 A0A1B0GVY2 172 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 IGIPA6NJ69 53 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 PIN1P1O15428 100 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 FCER1GP30273 86 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 HIGD2BQ4VC39 106 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 LYPD6Q86Y78 171 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 COX14Q96I36 57 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 PRR15LQ9BU68 103 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 ORMDL1Q9P0S3 153 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 USP9YO00507 2555 aaPredicted RBP2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 KNTC1P50748 2209 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 MYO7BQ6PIF6 2116 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 NBASA2RRP1 2371 aa2.15□□□□□ -2.07
FNDC3B-209ENST00000478016 FREM3P0C091 2139 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 SPTBP11277 2137 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 DNHD1Q96M86 4753 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 A0A0J9YX75 114 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 A0A1B0GUT8 65 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 NUPR2A6NF83 97 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 K7EMI3 77 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 NDUFB1O75438 58 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 DNAL4O96015 105 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 IGKV1-17P01599 117 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 TFF1P04155 84 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 DEFB110Q30KQ9 67 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 LCE3CQ5T5A8 94 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 RNF5Q99942 180 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 TTTY12Q9BZ98 90 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 INTS1Q8N201 2190 aaKnown RBP2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 AKAP9Q99996 3911 aa2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 SPTBN1Q01082 2364 aaKnown RBP2.14□□□□□ -2.07
FNDC3B-209ENST00000478016 ABCA12Q86UK0 2595 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 UNC13CQ8NB66 2214 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 TRBV6-6A0A0A6YYG2 114 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 CCL22O00626 93 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 PPP1R17O96001 155 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 IGLV7-43P04211 117 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 PDE6HQ13956 83 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 NREPQ16612 68 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 HCP5Q6MZN7 132 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 C9orf163Q8N9P6 203 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 UBALD1Q8TB05 177 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 SPRR4Q96PI1 79 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 KLK12Q9UKR0 248 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 NOTCH2Q04721 2471 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 DOPEY1Q5JWR5 2465 aa2.13□□□□□ -2.07
FNDC3B-209ENST00000478016 LRBAP50851 2863 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 RP1L1Q8IWN7 2480 aaPredicted RBP2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 IGKV3-7A0A075B6H7 116 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 M0R135 149 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 SPAG11BQ08648 103 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 C9orf129Q5T035 196 aaKnown RBP2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 SPAG11AQ6PDA7 123 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 FDCSPQ8NFU4 85 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 TMEM14CQ9P0S9 112 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 CENPEQ02224 2701 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 SHANK1Q9Y566 2161 aa2.12□□□□□ -2.07
FNDC3B-209ENST00000478016 FBN2P35556 2912 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 OTOGQ6ZRI0 2925 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 ANKRD17O75179 2603 aaKnown RBP2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 CRYBG3Q68DQ2 2970 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 ICE1Q9Y2F5 2266 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 CELSR1Q9NYQ6 3014 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 F8VRH5 84 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 CTSGP08311 255 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 CCL18P55774 89 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 FXYD6P3P58550 94 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 SPATA8Q6RVD6 105 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 LINC00612Q8N6U2 182 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 ST20-AS1Q8NBB2 130 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 COX7B2Q8TF08 81 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 MRPL36Q9P0J6 103 aaKnown RBP2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 MINOS1-NBL1R4GNA1 71 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 TEP1Q99973 2627 aaKnown RBP2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 PRRC2CQ9Y520 2896 aaKnown RBP2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 ADGRG4Q8IZF6 3080 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 NOTCH3Q9UM47 2321 aa2.11□□□□□ -2.07
FNDC3B-209ENST00000478016 MED12Q93074 2177 aa2.1□□□□□ -2.07
FNDC3B-209ENST00000478016 HIVEP3Q5T1R4 2406 aa2.1□□□□□ -2.07
FNDC3B-209ENST00000478016 DIDO1Q9BTC0 2240 aaKnown RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms