RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 DEFB133Q30KQ1 61 aa-0.47□□□□□ -2.48
CLK1-209ENST00000472679 NCMAPQ5T1S8 102 aa-0.47□□□□□ -2.48
CLK1-209ENST00000472679 COA4Q9NYJ1 87 aa-0.47□□□□□ -2.48
CLK1-209ENST00000472679 NDUFAF1Q9Y375 327 aa-0.47□□□□□ -2.48
CLK1-209ENST00000472679 Q9Y3F1 56 aa-0.47□□□□□ -2.48
CLK1-209ENST00000472679 WNK3Q9BYP7 1800 aa-0.48□□□□□ -2.49
CLK1-209ENST00000472679 CCL22O00626 93 aa-0.48□□□□□ -2.49
CLK1-209ENST00000472679 APODP05090 189 aa-0.48□□□□□ -2.49
CLK1-209ENST00000472679 HTN3P15516 51 aa-0.48□□□□□ -2.49
CLK1-209ENST00000472679 SPRR1BP22528 89 aa-0.48□□□□□ -2.49
CLK1-209ENST00000472679 TCEAL4Q96EI5 215 aa-0.48□□□□□ -2.49
CLK1-209ENST00000472679 COX14Q96I36 57 aa-0.48□□□□□ -2.49
CLK1-209ENST00000472679 ARFGEF2Q9Y6D5 1785 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 FAM92AA1XBS5 289 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 F8WEM9 126 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 H3BUX3 64 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 UQCRHP07919 91 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 SPART-AS1P0CW21 52 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 CBLN1P23435 193 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 PSPHP78330 225 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 ALX1Q15699 326 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 H1FX-AS1Q4G0G2 97 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 HSD17B12Q53GQ0 312 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 LINC01556Q5JQF7 62 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 CLPSL2Q6UWE3 100 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 TMEM35BQ8NCS4 154 aa-0.49□□□□□ -2.49
CLK1-209ENST00000472679 MYH13Q9UKX3 1938 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 MCRIP1C9JLW8 97 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 F2Z2F3 143 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 SSSCA1O60232 199 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 UBE2D2P62837 147 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 SPAG11BQ08648 103 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 TTC9CQ8N5M4 171 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 ATP6V0E2Q8NHE4 81 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 PPDPFLQ8WWR9 84 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 ANKARQ7Z5J8 1434 aa-0.5□□□□□ -2.49
CLK1-209ENST00000472679 TRAV12-2A0A075B6T6 113 aa-0.51□□□□□ -2.49
CLK1-209ENST00000472679 A8MTW9 85 aa-0.51□□□□□ -2.49
CLK1-209ENST00000472679 HIST1H1BP16401 226 aaKnown RBP-0.51□□□□□ -2.49
CLK1-209ENST00000472679 AKR1D1P51857 326 aa-0.51□□□□□ -2.49
CLK1-209ENST00000472679 PLGLB1Q02325 96 aa-0.51□□□□□ -2.49
CLK1-209ENST00000472679 SLC25A26Q70HW3 274 aa-0.51□□□□□ -2.49
CLK1-209ENST00000472679 BET1LQ9NYM9 111 aa-0.51□□□□□ -2.49
CLK1-209ENST00000472679 LINC00474Q9P2X8 69 aa-0.51□□□□□ -2.49
CLK1-209ENST00000472679 V9GYQ6 96 aa-0.51□□□□□ -2.49
CLK1-209ENST00000472679 MYH7P12883 1935 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 MYH8P13535 1937 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 PDCD11Q14690 1871 aaKnown RBP-0.52□□□□□ -2.49
CLK1-209ENST00000472679 A0A087WVE0 104 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 SPTY2D1-AS1A0A0U1RR47 76 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 ZNF670-ZNF695F2Z2N8 137 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 APOC1P02654 83 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 PRM1P04553 51 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 PRLHP81277 87 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 COX6A2Q02221 97 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 SCIMPQ6UWF3 145 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 SLC35B3Q9H1N7 401 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 GINS2Q9Y248 185 aa-0.52□□□□□ -2.49
CLK1-209ENST00000472679 LINC01546A6NGU7 62 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 H3BNG1 76 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 NPFFO15130 113 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 MT-ND4LP03901 98 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 IFITM1P13164 125 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 DEFB110Q30KQ9 67 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 FAM213BQ8TBF2 198 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 PPP1R1CQ8WVI7 109 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 TSLPQ969D9 159 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 LEAP2Q969E1 77 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 NAA60Q9H7X0 242 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 DYNLRB1Q9NP97 96 aa-0.53□□□□□ -2.49
CLK1-209ENST00000472679 SPEF2Q9C093 1822 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 CCDC171Q6TFL3 1326 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 NDUFA4O00483 81 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 SFTA3P0C7M3 94 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 HTN1P15515 57 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 S100GP29377 79 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 DEFB114Q30KQ6 69 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 WFDC10BQ8IUB3 73 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 VSTM2AQ8TAG5 236 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 TAS2R8Q9NYW2 309 aa-0.54□□□□□ -2.5
CLK1-209ENST00000472679 UQCRHLA0A096LP55 91 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 A0A096LPF7 62 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 GVQW2A0A096LPI5 108 aaPredicted RBP-0.55□□□□□ -2.5
CLK1-209ENST00000472679 J3KT08 172 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 M0QZ58 72 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 DPM2O94777 84 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 APELAP0DMC3 54 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 DEFB130BP0DP73 79 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 DEFB130AP0DP74 79 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 DCDP81605 110 aaKnown RBP-0.55□□□□□ -2.5
CLK1-209ENST00000472679 TMEM91Q6ZNR0 172 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 Q6ZRX8 168 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 SSBP3-AS1Q7Z2R9 100 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 C6orf201Q7Z4U5 140 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 DYNLRB2Q8TF09 96 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 DNAJC15Q9Y5T4 150 aa-0.55□□□□□ -2.5
CLK1-209ENST00000472679 A0A096LNI7 61 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 TRAV2A0A0B4J234 112 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 A0A0D9SFI3 127 aa-0.56□□□□□ -2.5
CLK1-209ENST00000472679 TMEM14DPA8MWL7 114 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 144.9 ms