RNA–Protein interactions for RNA: ENST00000468542.1

TRIM59-202, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 601 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-202ENST00000468542 C2orf82Q6UX34 121 aa2.23□□□□□ -2.05
TRIM59-202ENST00000468542 Q6ZRP5 223 aa2.23□□□□□ -2.05
TRIM59-202ENST00000468542 HIST3H2BBQ8N257 126 aa2.23□□□□□ -2.05
TRIM59-202ENST00000468542 PLEKHB2Q96CS7 222 aa2.23□□□□□ -2.05
TRIM59-202ENST00000468542 LINC00526Q96FQ7 95 aa2.23□□□□□ -2.05
TRIM59-202ENST00000468542 HIST1H2BLQ99880 126 aa2.23□□□□□ -2.05
TRIM59-202ENST00000468542 TOMM7Q9P0U1 55 aa2.23□□□□□ -2.05
TRIM59-202ENST00000468542 PCLOQ9Y6V0 5065 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 LOC107984156A0A0G2JMH3 177 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 MYMXA0A1B0GTQ4 84 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 PANO1I0J062 215 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 J3QQQ9 107 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 LEPROTO15243 131 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 C3orf79P0CE67 100 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 S100A2P29034 98 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 RPL18AQ02543 176 aaKnown RBP2.22□□□□□ -2.05
TRIM59-202ENST00000468542 MAJINQ3KP22 176 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 KRTAP5-4Q6L8H1 288 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 ARL17AQ8IVW1 177 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 C7orf33Q8WU49 177 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 TP73-AS1Q9UF72 201 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 ERG28Q9UKR5 140 aa2.22□□□□□ -2.05
TRIM59-202ENST00000468542 FAT3Q8TDW7 4589 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 IGLV5-37A0A075B6J1 123 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 IGKV2-24A0A0C4DH68 120 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 H0Y8G0 127 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 CHTF8P0CG12 524 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 LGALS3P17931 250 aaKnown RBP2.21□□□□□ -2.06
TRIM59-202ENST00000468542 KRTAP10-4P60372 401 aaPredicted RBP2.21□□□□□ -2.06
TRIM59-202ENST00000468542 KRTDAPP60985 99 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 GAGE2BQ13066 116 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 C9orf116Q5BN46 136 aaPredicted RBP2.21□□□□□ -2.06
TRIM59-202ENST00000468542 C9orf129Q5T035 196 aaKnown RBP2.21□□□□□ -2.06
TRIM59-202ENST00000468542 STPG4Q8N801 248 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 DPH3Q96FX2 82 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 PPDPFQ9H3Y8 114 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 NDUFA12Q9UI09 145 aa2.21□□□□□ -2.06
TRIM59-202ENST00000468542 LRP1Q07954 4544 aaKnown RBP2.21□□□□□ -2.06
TRIM59-202ENST00000468542 TNXBP22105 4242 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 IGKV2D-26A0A0A0MRZ7 120 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 A0A0J9YXY3 114 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 TIMM17BO60830 172 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 RPL24P83731 157 aaKnown RBP2.2□□□□□ -2.06
TRIM59-202ENST00000468542 GAGE2EQ4V326 116 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 LBHQ53QV2 105 aaPredicted RBP2.2□□□□□ -2.06
TRIM59-202ENST00000468542 MEIG1Q5JSS6 88 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 Q5VSD8 79 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 Q6ZVH6 145 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 PMCHL2Q9BQD1 86 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 SND1-IT1Q9HBX3 110 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 GAGE2DQ9UEU5 116 aa2.2□□□□□ -2.06
TRIM59-202ENST00000468542 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
TRIM59-202ENST00000468542 TRBV10-2A0A0K0K1G8 114 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 A0A1W2PNN7 141 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 HSBP1L1C9JCN9 74 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 M0QXV9 152 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 NDUFC2O95298 119 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 PFN2P35080 140 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 TSPEAR-AS2P59090 65 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 RPL37AP61513 92 aaKnown RBP2.19□□□□□ -2.06
TRIM59-202ENST00000468542 PRR3P79522 188 aaKnown RBP2.19□□□□□ -2.06
TRIM59-202ENST00000468542 MRPL55Q7Z7F7 128 aaKnown RBP2.19□□□□□ -2.06
TRIM59-202ENST00000468542 KRTAP7-1Q8IUC3 87 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 COPS9Q8WXC6 57 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 XAGE1AQ9HD64 81 aa2.19□□□□□ -2.06
TRIM59-202ENST00000468542 FLG2Q5D862 2391 aaPredicted RBP2.18□□□□□ -2.06
TRIM59-202ENST00000468542 FAM168BA1KXE4 195 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 ZNF815PA8K554 130 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 TMEM238C9JI98 176 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 DLEU1O43261 78 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 SMR3BP02814 79 aaPredicted RBP2.18□□□□□ -2.06
TRIM59-202ENST00000468542 VPREB1P12018 145 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 LINC00158P58513 81 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 HAMPP81172 84 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 JOSD1Q15040 202 aaPredicted RBP2.18□□□□□ -2.06
TRIM59-202ENST00000468542 SERTAD4-AS1Q5TG53 156 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 FAM19A5Q7Z5A7 132 aaPredicted RBP2.18□□□□□ -2.06
TRIM59-202ENST00000468542 MIR7-3HGQ8N6C7 128 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 NKAPP1Q8N9T2 125 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 LITAFQ99732 161 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 MIEN1Q9BRT3 115 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 SPANXB1Q9NS25 103 aaPredicted RBP2.18□□□□□ -2.06
TRIM59-202ENST00000468542 SPANXCQ9NY87 97 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 CBY1Q9Y3M2 126 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 C22orf24Q9Y442 160 aa2.18□□□□□ -2.06
TRIM59-202ENST00000468542 ABCA13Q86UQ4 5058 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 IGLV1-50A0A075B6I6 118 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 H0Y9J4 135 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 M0R378 163 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 SMIM13P0DJ93 91 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 IFITM1P13164 125 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 UBE2BP63146 152 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 S100A12P80511 92 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 SRSF9Q13242 221 aaKnown RBP eCLIP2.17□□□□□ -2.06
TRIM59-202ENST00000468542 SPINK6Q6UWN8 80 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 SCGB1D4Q6XE38 83 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 PHF5AQ7RTV0 110 aaKnown RBP2.17□□□□□ -2.06
TRIM59-202ENST00000468542 BOD1L2Q8IYS8 172 aa2.17□□□□□ -2.06
TRIM59-202ENST00000468542 SPANXDQ9BXN6 97 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 163.3 ms