RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PLEKHB2	Q96CS7	222 aa		7.84	□□□□□ -1.15
FDPS-204	ENST00000461507	MYMX	A0A1B0GTQ4	84 aa		7.83	□□□□□ -1.16
FDPS-204	ENST00000461507	LEPROT	O15243	131 aa		7.83	□□□□□ -1.16
FDPS-204	ENST00000461507	COX17	Q14061	63 aa		7.83	□□□□□ -1.16
FDPS-204	ENST00000461507	MRPL55	Q7Z7F7	128 aa	Known RBP	7.83	□□□□□ -1.16
FDPS-204	ENST00000461507	KRTAP7-1	Q8IUC3	87 aa		7.83	□□□□□ -1.16
FDPS-204	ENST00000461507	SND1-IT1	Q9HBX3	110 aa		7.83	□□□□□ -1.16
FDPS-204	ENST00000461507	SMIM13	P0DJ93	91 aa		7.82	□□□□□ -1.16
FDPS-204	ENST00000461507	HERV-K104	P63124	156 aa		7.82	□□□□□ -1.16
FDPS-204	ENST00000461507	SRSF9	Q13242	221 aa	Known RBP eCLIP	7.82	□□□□□ -1.16
FDPS-204	ENST00000461507	SPINK6	Q6UWN8	80 aa		7.82	□□□□□ -1.16
FDPS-204	ENST00000461507	C20orf202	A1L168	122 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507	RPL37AP8	A6NKH3	93 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507		J3QQQ9	107 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507	S100A6	P06703	90 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507	C3orf79	P0CE67	100 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507	S100A2	P29034	98 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507	TSPEAR-AS2	P59090	65 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507	PET117	Q6UWS5	81 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507	KRTAP11-1	Q8IUC1	163 aa		7.81	□□□□□ -1.16
FDPS-204	ENST00000461507	LRP2	P98164	4655 aa		7.8	□□□□□ -1.16
FDPS-204	ENST00000461507	RPL24	P83731	157 aa	Known RBP	7.8	□□□□□ -1.16
FDPS-204	ENST00000461507	COA6	Q5JTJ3	125 aa	Known RBP	7.8	□□□□□ -1.16
FDPS-204	ENST00000461507	LINC00587	B1AMM8	73 aa		7.79	□□□□□ -1.16
FDPS-204	ENST00000461507	IGLV7-43	P04211	117 aa		7.79	□□□□□ -1.16
FDPS-204	ENST00000461507	KRTAP10-8	P60410	259 aa		7.79	□□□□□ -1.16
FDPS-204	ENST00000461507	REG3G	Q6UW15	175 aa		7.79	□□□□□ -1.16
FDPS-204	ENST00000461507	MIR7-3HG	Q8N6C7	128 aa		7.79	□□□□□ -1.16
FDPS-204	ENST00000461507	LINC00167	Q96N53	147 aa		7.79	□□□□□ -1.16
FDPS-204	ENST00000461507	TP73-AS1	Q9UF72	201 aa		7.79	□□□□□ -1.16
FDPS-204	ENST00000461507	IGKV2-28	A0A075B6P5	120 aa		7.78	□□□□□ -1.16
FDPS-204	ENST00000461507	IGKV2D-28	P01615	120 aa		7.78	□□□□□ -1.16
FDPS-204	ENST00000461507	LINC01545	Q5VT33	79 aa		7.78	□□□□□ -1.16
FDPS-204	ENST00000461507	NMU	P48645	174 aa		7.77	□□□□□ -1.17
FDPS-204	ENST00000461507	BOD1L2	Q8IYS8	172 aa		7.77	□□□□□ -1.17
FDPS-204	ENST00000461507	DAND5	Q8N907	189 aa		7.77	□□□□□ -1.17
FDPS-204	ENST00000461507		E9PLD3	99 aa		7.76	□□□□□ -1.17
FDPS-204	ENST00000461507	VPREB1	P12018	145 aa		7.76	□□□□□ -1.17
FDPS-204	ENST00000461507	ATOH7	Q8N100	152 aa		7.76	□□□□□ -1.17
FDPS-204	ENST00000461507	DIRC1	Q969H9	104 aa		7.76	□□□□□ -1.17
FDPS-204	ENST00000461507	MIEN1	Q9BRT3	115 aa		7.76	□□□□□ -1.17
FDPS-204	ENST00000461507	IGLV5-37	A0A075B6J1	123 aa		7.75	□□□□□ -1.17
FDPS-204	ENST00000461507	NCR3	O14931	201 aa		7.75	□□□□□ -1.17
FDPS-204	ENST00000461507	NPC2	P61916	151 aa		7.75	□□□□□ -1.17
FDPS-204	ENST00000461507	UBE2A	P49459	152 aa		7.74	□□□□□ -1.17
FDPS-204	ENST00000461507	HIST3H2BB	Q8N257	126 aa		7.73	□□□□□ -1.17
FDPS-204	ENST00000461507	ZNF815P	A8K554	130 aa		7.72	□□□□□ -1.17
FDPS-204	ENST00000461507	BCE1	O60756	84 aa		7.72	□□□□□ -1.17
FDPS-204	ENST00000461507		Q8NDZ9	215 aa		7.72	□□□□□ -1.17
FDPS-204	ENST00000461507		A0A0J9YXY3	114 aa		7.71	□□□□□ -1.18
FDPS-204	ENST00000461507		H0Y9J4	135 aa		7.71	□□□□□ -1.18
FDPS-204	ENST00000461507		M0R378	163 aa		7.71	□□□□□ -1.18
FDPS-204	ENST00000461507	RPL28	P46779	137 aa	Known RBP	7.71	□□□□□ -1.18
FDPS-204	ENST00000461507	FAM19A1	Q7Z5A9	133 aa		7.71	□□□□□ -1.18
FDPS-204	ENST00000461507	HIST1H2BL	Q99880	126 aa		7.71	□□□□□ -1.18
FDPS-204	ENST00000461507	IGKV2D-26	A0A0A0MRZ7	120 aa		7.7	□□□□□ -1.18
FDPS-204	ENST00000461507	TMEM238	C9JI98	176 aa		7.7	□□□□□ -1.18
FDPS-204	ENST00000461507	ZNF861P	O60384	105 aa		7.7	□□□□□ -1.18
FDPS-204	ENST00000461507	AKR1D1	P51857	326 aa		7.7	□□□□□ -1.18
FDPS-204	ENST00000461507	SNRPE	P62304	92 aa	Known RBP	7.7	□□□□□ -1.18
FDPS-204	ENST00000461507	SCGB1D4	Q6XE38	83 aa		7.7	□□□□□ -1.18
FDPS-204	ENST00000461507	TTTY13	Q9BZ97	58 aa		7.7	□□□□□ -1.18
FDPS-204	ENST00000461507	IGLV1-50	A0A075B6I6	118 aa		7.69	□□□□□ -1.18
FDPS-204	ENST00000461507	S100A12	P80511	92 aa		7.69	□□□□□ -1.18
FDPS-204	ENST00000461507	PRLH	P81277	87 aa		7.68	□□□□□ -1.18
FDPS-204	ENST00000461507	ANKRD39	Q53RE8	183 aa		7.68	□□□□□ -1.18
FDPS-204	ENST00000461507	TMEM126A	Q9H061	195 aa		7.68	□□□□□ -1.18
FDPS-204	ENST00000461507	HSBP1L1	C9JCN9	74 aa		7.67	□□□□□ -1.18
FDPS-204	ENST00000461507	SCGB1D1	O95968	90 aa		7.66	□□□□□ -1.18
FDPS-204	ENST00000461507	S100A7L2	Q5SY68	101 aa		7.66	□□□□□ -1.18
FDPS-204	ENST00000461507	ADAMTSL4-AS1	Q5T5F5	129 aa		7.66	□□□□□ -1.18
FDPS-204	ENST00000461507	RNF213	Q63HN8	5207 aa		7.65	□□□□□ -1.18
FDPS-204	ENST00000461507	TRBV10-3	A0A0K0K1G6	114 aa		7.65	□□□□□ -1.18
FDPS-204	ENST00000461507	PRR26	Q8N8Z3	221 aa		7.65	□□□□□ -1.18
FDPS-204	ENST00000461507	SPANXB1	Q9NS25	103 aa	Predicted RBP	7.65	□□□□□ -1.18
FDPS-204	ENST00000461507	ETDC	A0A1B0GVM5	59 aa		7.64	□□□□□ -1.19
FDPS-204	ENST00000461507	PRY	O14603	147 aa		7.64	□□□□□ -1.19
FDPS-204	ENST00000461507	DDT	P30046	118 aa		7.64	□□□□□ -1.19
FDPS-204	ENST00000461507	HIGD2A	Q9BW72	106 aa		7.64	□□□□□ -1.19
FDPS-204	ENST00000461507	TIMM17B	O60830	172 aa		7.63	□□□□□ -1.19
FDPS-204	ENST00000461507	SOSTDC1	Q6X4U4	206 aa		7.63	□□□□□ -1.19
FDPS-204	ENST00000461507	C5orf52	A6NGY3	159 aa		7.62	□□□□□ -1.19
FDPS-204	ENST00000461507	KRTAP1-4	P0C5Y4	121 aa		7.62	□□□□□ -1.19
FDPS-204	ENST00000461507	PCP2	Q8IVA1	136 aa		7.62	□□□□□ -1.19
FDPS-204	ENST00000461507	OR13C6P	Q8NH95	151 aa		7.62	□□□□□ -1.19
FDPS-204	ENST00000461507	LINC00308	Q8TCZ7	52 aa		7.62	□□□□□ -1.19
FDPS-204	ENST00000461507	TRBV10-2	A0A0K0K1G8	114 aa		7.61	□□□□□ -1.19
FDPS-204	ENST00000461507	NDUFC2	O95298	119 aa		7.61	□□□□□ -1.19
FDPS-204	ENST00000461507	LITAF	Q99732	161 aa		7.61	□□□□□ -1.19
FDPS-204	ENST00000461507	TMA7	Q9Y2S6	64 aa	Known RBP	7.61	□□□□□ -1.19
FDPS-204	ENST00000461507	LOC107984156	A0A0G2JMH3	177 aa		7.6	□□□□□ -1.19
FDPS-204	ENST00000461507	EIF4EBP3	O60516	100 aa	Predicted RBP	7.6	□□□□□ -1.19
FDPS-204	ENST00000461507	ARL17A	Q8IVW1	177 aa		7.6	□□□□□ -1.19
FDPS-204	ENST00000461507	SPANXC	Q9NY87	97 aa		7.6	□□□□□ -1.19
FDPS-204	ENST00000461507	RPL13A	P40429	203 aa	Known RBP	7.59	□□□□□ -1.19
FDPS-204	ENST00000461507	COPS9	Q8WXC6	57 aa		7.59	□□□□□ -1.19
FDPS-204	ENST00000461507	ANAPC11	Q9NYG5	84 aa		7.59	□□□□□ -1.19
FDPS-204	ENST00000461507	TRAV23DV6	A0A075B6W5	121 aa		7.58	□□□□□ -1.2
FDPS-204	ENST00000461507	KRTAP13-1	Q8IUC0	172 aa		7.58	□□□□□ -1.2
FDPS-204	ENST00000461507	KCNQ1DN	Q9H478	68 aa		7.58	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 264 ms