RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 Q8N814 137 aa11.37□□□□□ -0.59
LSS-205ENST00000457828 MDFIQ99750 246 aa11.37□□□□□ -0.59
LSS-205ENST00000457828 CELA1Q9UNI1 258 aa11.37□□□□□ -0.59
LSS-205ENST00000457828 CR1P17927 2039 aa11.37□□□□□ -0.59
LSS-205ENST00000457828 HIVEP1P15822 2718 aa11.36□□□□□ -0.59
LSS-205ENST00000457828 TMEM258P61165 79 aa11.36□□□□□ -0.59
LSS-205ENST00000457828 F8WEM9 126 aa11.36□□□□□ -0.59
LSS-205ENST00000457828 FAM19A1Q7Z5A9 133 aa11.36□□□□□ -0.59
LSS-205ENST00000457828 IGKV2-28A0A075B6P5 120 aa11.35□□□□□ -0.59
LSS-205ENST00000457828 IGKV2D-28P01615 120 aa11.35□□□□□ -0.59
LSS-205ENST00000457828 C14orf177Q52M58 125 aa11.35□□□□□ -0.59
LSS-205ENST00000457828 ATP5EP2Q5VTU8 51 aa11.35□□□□□ -0.59
LSS-205ENST00000457828 PKIGQ9Y2B9 76 aa11.35□□□□□ -0.59
LSS-205ENST00000457828 UNQ6190/PRO20217Q6UXQ8 127 aa11.35□□□□□ -0.59
LSS-205ENST00000457828 ASH1LQ9NR48 2969 aaKnown RBP11.34□□□□□ -0.59
LSS-205ENST00000457828 SNURFQ9Y675 71 aa11.34□□□□□ -0.59
LSS-205ENST00000457828 COX7BP24311 80 aa11.33□□□□□ -0.6
LSS-205ENST00000457828 FAM19A5Q7Z5A7 132 aaPredicted RBP11.33□□□□□ -0.6
LSS-205ENST00000457828 SMG1Q96Q15 3661 aaKnown RBP11.33□□□□□ -0.6
LSS-205ENST00000457828 NREPQ16612 68 aa11.32□□□□□ -0.6
LSS-205ENST00000457828 APCP25054 2843 aa11.32□□□□□ -0.6
LSS-205ENST00000457828 FAM104AQ969W3 186 aa11.32□□□□□ -0.6
LSS-205ENST00000457828 FAM236DA0A1B0GTK5 79 aa11.32□□□□□ -0.6
LSS-205ENST00000457828 FAM236CP0DP71 79 aa11.32□□□□□ -0.6
LSS-205ENST00000457828 RELNP78509 3460 aa11.31□□□□□ -0.6
LSS-205ENST00000457828 X6R8D5 127 aa11.3□□□□□ -0.6
LSS-205ENST00000457828 CYSRT1A8MQ03 144 aa11.3□□□□□ -0.6
LSS-205ENST00000457828 C5orf47Q569G3 176 aa11.29□□□□□ -0.6
LSS-205ENST00000457828 C6orf223Q8N319 242 aa11.29□□□□□ -0.6
LSS-205ENST00000457828 PDE6GP18545 87 aa11.28□□□□□ -0.6
LSS-205ENST00000457828 SPATA3Q8NHX4 192 aa11.28□□□□□ -0.6
LSS-205ENST00000457828 ETDCA0A1B0GVM5 59 aa11.28□□□□□ -0.6
LSS-205ENST00000457828 KRTAP10-11P60412 298 aa11.27□□□□□ -0.61
LSS-205ENST00000457828 SYCNQ0VAF6 134 aa11.27□□□□□ -0.61
LSS-205ENST00000457828 NDUFC2O95298 119 aa11.26□□□□□ -0.61
LSS-205ENST00000457828 COX17Q14061 63 aa11.26□□□□□ -0.61
LSS-205ENST00000457828 K7EIL1 84 aa11.26□□□□□ -0.61
LSS-205ENST00000457828 WFDC10BQ8IUB3 73 aa11.25□□□□□ -0.61
LSS-205ENST00000457828 LRCOL1A6NCL2 159 aa11.25□□□□□ -0.61
LSS-205ENST00000457828 HRCT1Q6UXD1 115 aa11.25□□□□□ -0.61
LSS-205ENST00000457828 CSMD1Q96PZ7 3565 aa11.25□□□□□ -0.61
LSS-205ENST00000457828 C9orf129Q5T035 196 aaKnown RBP11.25□□□□□ -0.61
LSS-205ENST00000457828 ZANQ9Y493 2812 aa11.25□□□□□ -0.61
LSS-205ENST00000457828 LYPD5Q6UWN5 251 aa11.24□□□□□ -0.61
LSS-205ENST00000457828 CRYGAP11844 174 aa11.24□□□□□ -0.61
LSS-205ENST00000457828 FUSP35637 526 aaKnown RBP eCLIP11.24□□□□□ -0.616e-7■■■□□ 18.3
LSS-205ENST00000457828 NSD1Q96L73 2696 aaPredicted RBP11.23□□□□□ -0.61
LSS-205ENST00000457828 TRBV10-3A0A0K0K1G6 114 aa11.23□□□□□ -0.61
LSS-205ENST00000457828 C3orf84H3BNL1 204 aa11.23□□□□□ -0.61
LSS-205ENST00000457828 Q8N3U1 123 aa11.23□□□□□ -0.61
LSS-205ENST00000457828 A0A1B0GUV1 79 aa11.22□□□□□ -0.61
LSS-205ENST00000457828 B9D2Q9BPU9 175 aa11.22□□□□□ -0.61
LSS-205ENST00000457828 ZNF73O43830 326 aaPredicted RBP11.21□□□□□ -0.61
LSS-205ENST00000457828 H3BQ85 93 aa11.21□□□□□ -0.62
LSS-205ENST00000457828 BPY2O14599 106 aa11.21□□□□□ -0.62
LSS-205ENST00000457828 CDK2AP2O75956 126 aa11.21□□□□□ -0.62
LSS-205ENST00000457828 Q8NAQ8 132 aa11.21□□□□□ -0.62
LSS-205ENST00000457828 UBE2AP49459 152 aa11.2□□□□□ -0.62
LSS-205ENST00000457828 HRNRQ86YZ3 2850 aaPredicted RBP11.2□□□□□ -0.62
LSS-205ENST00000457828 LINC00575Q6W349 94 aa11.19□□□□□ -0.62
LSS-205ENST00000457828 CRYBG3Q68DQ2 2970 aa11.18□□□□□ -0.62
LSS-205ENST00000457828 Q6ZVQ6 151 aa11.17□□□□□ -0.62
LSS-205ENST00000457828 FAM19A3Q7Z5A8 133 aa11.16□□□□□ -0.62
LSS-205ENST00000457828 MPLKIPQ8TAP9 179 aa11.16□□□□□ -0.62
LSS-205ENST00000457828 LINC01600Q96MT4 127 aa11.16□□□□□ -0.62
LSS-205ENST00000457828 C19orf73Q9NVV2 129 aa11.16□□□□□ -0.62
LSS-205ENST00000457828 ESRGQ1W209 222 aa11.16□□□□□ -0.62
LSS-205ENST00000457828 C10orf25Q5T742 122 aa11.16□□□□□ -0.62
LSS-205ENST00000457828 TRAV7A0A075B6U4 112 aa11.16□□□□□ -0.62
LSS-205ENST00000457828 LINC01561Q8N1V8 128 aa11.15□□□□□ -0.62
LSS-205ENST00000457828 NBEAL2Q6ZNJ1 2754 aa11.15□□□□□ -0.62
LSS-205ENST00000457828 LINC01547P58512 204 aaPredicted RBP11.15□□□□□ -0.62
LSS-205ENST00000457828 GIG44P09565 113 aaPredicted RBP11.13□□□□□ -0.63
LSS-205ENST00000457828 MUC7Q8TAX7 377 aa11.13□□□□□ -0.63
LSS-205ENST00000457828 BRK1Q8WUW1 75 aa11.13□□□□□ -0.63
LSS-205ENST00000457828 DCHS2Q6V1P9 2916 aa11.13□□□□□ -0.63
LSS-205ENST00000457828 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.13□□□□□ -0.63
LSS-205ENST00000457828 HIGD2AQ9BW72 106 aa11.13□□□□□ -0.63
LSS-205ENST00000457828 CELSR2Q9HCU4 2923 aa11.13□□□□□ -0.63
LSS-205ENST00000457828 C1orf134Q5TEV5 83 aa11.12□□□□□ -0.63
LSS-205ENST00000457828 CSNK1G2-AS1Q8NCQ2 148 aa11.11□□□□□ -0.63
LSS-205ENST00000457828 PLAC8L1A1L4L8 177 aa11.1□□□□□ -0.63
LSS-205ENST00000457828 M0R378 163 aa11.1□□□□□ -0.63
LSS-205ENST00000457828 WWC2-AS2Q96NR7 200 aa11.1□□□□□ -0.63
LSS-205ENST00000457828 Q8N9L7 120 aa11.1□□□□□ -0.63
LSS-205ENST00000457828 NIPBLQ6KC79 2804 aaeCLIP11.09□□□□□ -0.63
LSS-205ENST00000457828 RPL37AP8A6NKH3 93 aa11.07□□□□□ -0.64
LSS-205ENST00000457828 EGFEM1PQ0D2K5 195 aa11.07□□□□□ -0.64
LSS-205ENST00000457828 C4orf26Q17RF5 130 aa11.07□□□□□ -0.64
LSS-205ENST00000457828 C4orf48Q5BLP8 95 aa11.07□□□□□ -0.64
LSS-205ENST00000457828 Q6ZQT0 140 aa11.05□□□□□ -0.64
LSS-205ENST00000457828 A0A096LNI7 61 aa11.05□□□□□ -0.64
LSS-205ENST00000457828 RPS28P62857 69 aaKnown RBP11.04□□□□□ -0.64
LSS-205ENST00000457828 C7orf33Q8WU49 177 aa11.04□□□□□ -0.64
LSS-205ENST00000457828 SVEP1Q4LDE5 3571 aa11.04□□□□□ -0.64
LSS-205ENST00000457828 A0A0U1RQV1 116 aa11.04□□□□□ -0.64
LSS-205ENST00000457828 SERP1Q9Y6X1 66 aa11.04□□□□□ -0.64
LSS-205ENST00000457828 NDUFC2-KCTD14E9PQ53 114 aa11.03□□□□□ -0.64
LSS-205ENST00000457828 NDUFC1O43677 76 aa11.02□□□□□ -0.64
LSS-205ENST00000457828 LINC01556Q5JQF7 62 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 272.9 ms