RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 TRBV7-4A0A0J9YYF1 115 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 C10orf25Q5T742 122 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 FAM19A5Q7Z5A7 132 aaPredicted RBP2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 FAM19A1Q7Z5A9 133 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 C20orf197Q8N268 126 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 WFDC9Q8NEX5 89 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 C6orf48Q9UBA6 75 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 CELA1Q9UNI1 258 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 SERP1Q9Y6X1 66 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 RELNP78509 3460 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 ABCA12Q86UK0 2595 aa2.25□□□□□ -2.05
HMGN1P18-201ENST00000457642 ITPR3Q14573 2671 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 EPG5Q9HCE0 2579 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 JMJD1CQ15652 2540 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 A0A1B0GW54 56 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 ERC2-IT1O76042 136 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 VPREB1P12018 145 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 FUSP35637 526 aaKnown RBP eCLIP2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 KRTAP10-3P60369 221 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 SYCNQ0VAF6 134 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 NREPQ16612 68 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 HIGD2BQ4VC39 106 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 KPRPQ5T749 579 aaPredicted RBP2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q8N3U1 123 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 SPATA3Q8NHX4 192 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 RMI2Q96E14 147 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 XAGE1AQ9HD64 81 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 DHRS4-AS1Q9P1J3 65 aa2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 ASH1LQ9NR48 2969 aaKnown RBP2.24□□□□□ -2.05
HMGN1P18-201ENST00000457642 HIVEP2P31629 2446 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 UBR5O95071 2799 aaPredicted RBP2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 CHD6Q8TD26 2715 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 CCDC168Q8NDH2 2452 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 IGKV2D-24A0A075B6R9 120 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 ETDCA0A1B0GVM5 59 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 BPY2O14599 106 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 PRYO14603 147 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 KLKP1Q107X0 134 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 LINC01556Q5JQF7 62 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q6ZRU5 148 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 Q8NDZ9 215 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 FLNAP21333 2647 aaKnown RBP2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 USP24Q9UPU5 2620 aa2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 UTP20O75691 2785 aaKnown RBP2.23□□□□□ -2.05
HMGN1P18-201ENST00000457642 TEX15Q9BXT5 2789 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 COL12A1Q99715 3063 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 CELSR1Q9NYQ6 3014 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 INAFM1C9JVW0 142 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 F8WEM9 126 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 WIPF1O43516 503 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 WFDC10BQ8IUB3 73 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 LINC00528Q8N1L1 170 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 KCNQ1DNQ9H478 68 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 PLA2G2DQ9UNK4 145 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 ZFYVE26Q68DK2 2539 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 ZANQ9Y493 2812 aa2.22□□□□□ -2.05
HMGN1P18-201ENST00000457642 FN1P02751 2386 aaKnown RBP2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 MXRA5Q9NR99 2828 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 DEFB131BA0A096LNP1 70 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 SMIM26A0A096LP01 95 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 TRAV10A0A0B4J240 114 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 H7BZZ5 65 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 TLX1NBP0CAT3 122 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 Q6ZTC4 211 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 SCXQ7RTU7 201 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 C15orf56Q8N910 161 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 C11orf45Q8TAV5 145 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 TMEM254Q8TBM7 123 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 MRAPQ8TCY5 172 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 SMR3AQ99954 134 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 CYSTM1Q9H1C7 97 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 SNURFQ9Y675 71 aa2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 SETXQ7Z333 2677 aaKnown RBP2.21□□□□□ -2.06
HMGN1P18-201ENST00000457642 SVEP1Q4LDE5 3571 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 SETD2Q9BYW2 2564 aaPredicted RBP2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 MAP1AP78559 2803 aaPredicted RBP2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 MTORP42345 2549 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 FBN2P35556 2912 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 IGLV5-37A0A075B6J1 123 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 M0R2N4 97 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 IGKV4-1P06312 121 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 ESRGQ1W209 222 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 Q6ZRP5 223 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 Q6ZRX8 168 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 DEFB105AQ8NG35 78 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 C7orf33Q8WU49 177 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 PKIGQ9Y2B9 76 aa2.2□□□□□ -2.06
HMGN1P18-201ENST00000457642 CENPEQ02224 2701 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 IGLV5-48A0A075B6I7 105 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 C3orf84H3BNL1 204 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 DNAH10OSP0CZ25 163 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 UBE2BP63146 152 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 C1orf137Q5JT78 98 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 KRTAP26-1Q6PEX3 210 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 HRCT1Q6UXD1 115 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 TM2D3Q9BRN9 247 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 RETNQ9HD89 108 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 CELSR2Q9HCU4 2923 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 ACANP16112 2415 aa2.19□□□□□ -2.06
HMGN1P18-201ENST00000457642 ZFHX3Q15911 3703 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms