RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 HIST1H2BHQ93079 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST1H2BNQ99877 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 HIST1H2BMQ99879 126 aa15.01□□□□□ -0.01
MSH2-203ENST00000454849 IGKV2-28A0A075B6P5 120 aa15□□□□□ -0.01
MSH2-203ENST00000454849 IGKV2D-28P01615 120 aa15□□□□□ -0.01
MSH2-203ENST00000454849 HMCN2Q8NDA2 5059 aa15□□□□□ -0.01
MSH2-203ENST00000454849 ZNF861PO60384 105 aa14.99□□□□□ -0.01
MSH2-203ENST00000454849 SMIM13P0DJ93 91 aa14.99□□□□□ -0.01
MSH2-203ENST00000454849 VPREB1P12018 145 aa14.99□□□□□ -0.01
MSH2-203ENST00000454849 SFTA2Q6UW10 78 aa14.99□□□□□ -0.01
MSH2-203ENST00000454849 TSPEAR-AS2P59090 65 aa14.98□□□□□ -0.01
MSH2-203ENST00000454849 BCE1O60756 84 aa14.97□□□□□ -0.01
MSH2-203ENST00000454849 NDUFA12Q9UI09 145 aa14.97□□□□□ -0.01
MSH2-203ENST00000454849 DPM2O94777 84 aa14.96□□□□□ -0.01
MSH2-203ENST00000454849 PLNP26678 52 aa14.96□□□□□ -0.01
MSH2-203ENST00000454849 MEIG1Q5JSS6 88 aa14.96□□□□□ -0.01
MSH2-203ENST00000454849 KRTAP1-4P0C5Y4 121 aa14.95□□□□□ -0.02
MSH2-203ENST00000454849 ATP6V1G1O75348 118 aa14.94□□□□□ -0.02
MSH2-203ENST00000454849 RPL24P83731 157 aaKnown RBP14.94□□□□□ -0.02
MSH2-203ENST00000454849 MAP1LC3CQ9BXW4 147 aa14.94□□□□□ -0.02
MSH2-203ENST00000454849 IGKCP01834 107 aa14.93□□□□□ -0.02
MSH2-203ENST00000454849 TMEM238C9JI98 176 aa14.92□□□□□ -0.02
MSH2-203ENST00000454849 LEPROTO15243 131 aa14.92□□□□□ -0.02
MSH2-203ENST00000454849 MYMXA0A1B0GTQ4 84 aa14.91□□□□□ -0.02
MSH2-203ENST00000454849 RPL28P46779 137 aaKnown RBP14.91□□□□□ -0.02
MSH2-203ENST00000454849 MIR7-3HGQ8N6C7 128 aa14.91□□□□□ -0.02
MSH2-203ENST00000454849 IGLV1-50A0A075B6I6 118 aa14.9□□□□□ -0.02
MSH2-203ENST00000454849 HERV-K104P63124 156 aa14.9□□□□□ -0.02
MSH2-203ENST00000454849 PLEKHB2Q96CS7 222 aa14.9□□□□□ -0.02
MSH2-203ENST00000454849 UBE2AP49459 152 aa14.89□□□□□ -0.03
MSH2-203ENST00000454849 J3QQQ9 107 aa14.88□□□□□ -0.03
MSH2-203ENST00000454849 HERVK_113P61574 105 aa14.87□□□□□ -0.03
MSH2-203ENST00000454849 BOD1L2Q8IYS8 172 aa14.87□□□□□ -0.03
MSH2-203ENST00000454849 DAND5Q8N907 189 aa14.87□□□□□ -0.03
MSH2-203ENST00000454849 SYS1-DBNDD2H3BUS1 97 aa14.86□□□□□ -0.03
MSH2-203ENST00000454849 PRLHP81277 87 aa14.85□□□□□ -0.03
MSH2-203ENST00000454849 TMEM126AQ9H061 195 aa14.85□□□□□ -0.03
MSH2-203ENST00000454849 NCR3O14931 201 aa14.84□□□□□ -0.03
MSH2-203ENST00000454849 LGALS3P17931 250 aaKnown RBP14.84□□□□□ -0.03
MSH2-203ENST00000454849 FAM19A1Q7Z5A9 133 aa14.84□□□□□ -0.03
MSH2-203ENST00000454849 KRTAP13-1Q8IUC0 172 aa14.84□□□□□ -0.03
MSH2-203ENST00000454849 ANAPC11Q9NYG5 84 aa14.84□□□□□ -0.03
MSH2-203ENST00000454849 M0R378 163 aa14.83□□□□□ -0.04
MSH2-203ENST00000454849 LINC00587B1AMM8 73 aa14.8□□□□□ -0.04
MSH2-203ENST00000454849 A0A087X002 238 aa14.77□□□□□ -0.05
MSH2-203ENST00000454849 C3orf79P0CE67 100 aa14.77□□□□□ -0.05
MSH2-203ENST00000454849 LINC01545Q5VT33 79 aa14.77□□□□□ -0.05
MSH2-203ENST00000454849 E9PLD3 99 aa14.76□□□□□ -0.05
MSH2-203ENST00000454849 NMUP48645 174 aa14.76□□□□□ -0.05
MSH2-203ENST00000454849 KRTDAPP60985 99 aa14.76□□□□□ -0.05
MSH2-203ENST00000454849 PET117Q6UWS5 81 aa14.76□□□□□ -0.05
MSH2-203ENST00000454849 COA6Q5JTJ3 125 aaKnown RBP14.75□□□□□ -0.05
MSH2-203ENST00000454849 RPL13AP40429 203 aaKnown RBP14.74□□□□□ -0.05
MSH2-203ENST00000454849 NPC2P61916 151 aa14.74□□□□□ -0.05
MSH2-203ENST00000454849 A0A0J9YXY3 114 aa14.72□□□□□ -0.05
MSH2-203ENST00000454849 ADAMTSL4-AS1Q5T5F5 129 aa14.72□□□□□ -0.05
MSH2-203ENST00000454849 TRBV10-3A0A0K0K1G6 114 aa14.71□□□□□ -0.05
MSH2-203ENST00000454849 HIGD2AQ9BW72 106 aa14.71□□□□□ -0.05
MSH2-203ENST00000454849 EIF4EBP3O60516 100 aaPredicted RBP14.7□□□□□ -0.06
MSH2-203ENST00000454849 CRYGAP11844 174 aa14.7□□□□□ -0.06
MSH2-203ENST00000454849 IGKV2D-26A0A0A0MRZ7 120 aa14.69□□□□□ -0.06
MSH2-203ENST00000454849 TTTY13Q9BZ97 58 aa14.69□□□□□ -0.06
MSH2-203ENST00000454849 UBR4Q5T4S7 5183 aa14.69□□□□□ -0.06
MSH2-203ENST00000454849 SOSTDC1Q6X4U4 206 aa14.68□□□□□ -0.06
MSH2-203ENST00000454849 MIEN1Q9BRT3 115 aa14.68□□□□□ -0.06
MSH2-203ENST00000454849 LOC107984156A0A0G2JMH3 177 aa14.66□□□□□ -0.06
MSH2-203ENST00000454849 PRYO14603 147 aa14.66□□□□□ -0.06
MSH2-203ENST00000454849 TSPAN13O95857 204 aa14.66□□□□□ -0.06
MSH2-203ENST00000454849 KRTAP13-2Q52LG2 175 aa14.66□□□□□ -0.06
MSH2-203ENST00000454849 ARL17AQ8IVW1 177 aa14.66□□□□□ -0.06
MSH2-203ENST00000454849 TYMSOSQ8TAI1 123 aa14.66□□□□□ -0.06
MSH2-203ENST00000454849 KCNQ1DNQ9H478 68 aa14.66□□□□□ -0.06
MSH2-203ENST00000454849 S100A1P23297 94 aa14.65□□□□□ -0.06
MSH2-203ENST00000454849 ATOH7Q8N100 152 aa14.65□□□□□ -0.06
MSH2-203ENST00000454849 ZNF815PA8K554 130 aa14.63□□□□□ -0.07
MSH2-203ENST00000454849 DDTP30046 118 aa14.63□□□□□ -0.07
MSH2-203ENST00000454849 LRP2P98164 4655 aa14.62□□□□□ -0.07
MSH2-203ENST00000454849 ETDCA0A1B0GVM5 59 aa14.62□□□□□ -0.07
MSH2-203ENST00000454849 SPRR1AP35321 89 aa14.61□□□□□ -0.07
MSH2-203ENST00000454849 LITAFQ99732 161 aa14.6□□□□□ -0.07
MSH2-203ENST00000454849 SPANXB1Q9NS25 103 aaPredicted RBP14.6□□□□□ -0.07
MSH2-203ENST00000454849 TRBV10-2A0A0K0K1G8 114 aa14.59□□□□□ -0.07
MSH2-203ENST00000454849 C20orf202A1L168 122 aa14.59□□□□□ -0.07
MSH2-203ENST00000454849 KRTAP4-16G5E9R7 235 aaPredicted RBP14.59□□□□□ -0.07
MSH2-203ENST00000454849 FAM229BQ4G0N7 80 aa14.59□□□□□ -0.07
MSH2-203ENST00000454849 LINC00337Q8N6G1 96 aa14.59□□□□□ -0.07
MSH2-203ENST00000454849 ANKRD39Q53RE8 183 aa14.58□□□□□ -0.08
MSH2-203ENST00000454849 S100A7L2Q5SY68 101 aa14.58□□□□□ -0.08
MSH2-203ENST00000454849 SMCR5Q8TEV8 140 aa14.57□□□□□ -0.08
MSH2-203ENST00000454849 NDUFC2O95298 119 aa14.56□□□□□ -0.08
MSH2-203ENST00000454849 LINC00308Q8TCZ7 52 aa14.56□□□□□ -0.08
MSH2-203ENST00000454849 S100A12P80511 92 aa14.55□□□□□ -0.08
MSH2-203ENST00000454849 C3orf22Q8N5N4 141 aa14.55□□□□□ -0.08
MSH2-203ENST00000454849 SPRR4Q96PI1 79 aa14.55□□□□□ -0.08
MSH2-203ENST00000454849 B5MCH6 92 aa14.54□□□□□ -0.08
MSH2-203ENST00000454849 IGLV6-57P01721 117 aa14.54□□□□□ -0.08
MSH2-203ENST00000454849 PRR4Q16378 134 aa14.54□□□□□ -0.08
MSH2-203ENST00000454849 HIST3H2BBQ8N257 126 aa14.54□□□□□ -0.08
MSH2-203ENST00000454849 PPDPFQ9H3Y8 114 aa14.54□□□□□ -0.08
MSH2-203ENST00000454849 TIMM17BO60830 172 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms