RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 PMCHL2Q9BQD1 86 aa8.09□□□□□ -1.11
SNRNP27-203ENST00000450162 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
SNRNP27-203ENST00000450162 PSORS1C2Q9UIG4 136 aa8.09□□□□□ -1.11
SNRNP27-203ENST00000450162 C22orf24Q9Y442 160 aa8.09□□□□□ -1.11
SNRNP27-203ENST00000450162 IGLV5-37A0A075B6J1 123 aa8.08□□□□□ -1.12
SNRNP27-203ENST00000450162 LINC00158P58513 81 aa8.08□□□□□ -1.12
SNRNP27-203ENST00000450162 UBE2BP63146 152 aa8.08□□□□□ -1.12
SNRNP27-203ENST00000450162 XP32Q5T750 250 aa8.08□□□□□ -1.12
SNRNP27-203ENST00000450162 SERTAD4-AS1Q5TG53 156 aa8.08□□□□□ -1.12
SNRNP27-203ENST00000450162 SPINK6Q6UWN8 80 aa8.08□□□□□ -1.12
SNRNP27-203ENST00000450162 J3QQQ9 107 aa8.07□□□□□ -1.12
SNRNP27-203ENST00000450162 HNRNPA3P51991 378 aaKnown RBP8.07□□□□□ -1.12
SNRNP27-203ENST00000450162 RPL24P83731 157 aaKnown RBP8.07□□□□□ -1.12
SNRNP27-203ENST00000450162 MRPL55Q7Z7F7 128 aaKnown RBP8.07□□□□□ -1.12
SNRNP27-203ENST00000450162 SND1-IT1Q9HBX3 110 aa8.07□□□□□ -1.12
SNRNP27-203ENST00000450162 C20orf202A1L168 122 aa8.06□□□□□ -1.12
SNRNP27-203ENST00000450162 C3orf79P0CE67 100 aa8.06□□□□□ -1.12
SNRNP27-203ENST00000450162 LGALS3P17931 250 aaKnown RBP8.06□□□□□ -1.12
SNRNP27-203ENST00000450162 SRSF9Q13242 221 aaKnown RBP eCLIP8.06□□□□□ -1.12
SNRNP27-203ENST00000450162 MEIG1Q5JSS6 88 aa8.06□□□□□ -1.12
SNRNP27-203ENST00000450162 C1orf137Q5JT78 98 aa8.06□□□□□ -1.12
SNRNP27-203ENST00000450162 NKAPP1Q8N9T2 125 aa8.06□□□□□ -1.12
SNRNP27-203ENST00000450162 E9PLD3 99 aa8.05□□□□□ -1.12
SNRNP27-203ENST00000450162 S100A6P06703 90 aa8.05□□□□□ -1.12
SNRNP27-203ENST00000450162 KRTDAPP60985 99 aa8.05□□□□□ -1.12
SNRNP27-203ENST00000450162 S100A2P29034 98 aa8.04□□□□□ -1.12
SNRNP27-203ENST00000450162 IGLV7-43P04211 117 aa8.03□□□□□ -1.12
SNRNP27-203ENST00000450162 SMIM13P0DJ93 91 aa8.03□□□□□ -1.12
SNRNP27-203ENST00000450162 EIF4EBP3O60516 100 aaPredicted RBP8.02□□□□□ -1.13
SNRNP27-203ENST00000450162 TSPEAR-AS2P59090 65 aa8.02□□□□□ -1.13
SNRNP27-203ENST00000450162 REG3GQ6UW15 175 aa8.02□□□□□ -1.13
SNRNP27-203ENST00000450162 KRTAP11-1Q8IUC1 163 aa8.02□□□□□ -1.13
SNRNP27-203ENST00000450162 LINC00167Q96N53 147 aa8.02□□□□□ -1.13
SNRNP27-203ENST00000450162 DMBT1Q9UGM3 2413 aaPredicted RBP8.02□□□□□ -1.13
SNRNP27-203ENST00000450162 MYCBP2O75592 4640 aa8.01□□□□□ -1.13
SNRNP27-203ENST00000450162 A0A0U1RRA0 63 aa8.01□□□□□ -1.13
SNRNP27-203ENST00000450162 VPREB1P12018 145 aa8.01□□□□□ -1.13
SNRNP27-203ENST00000450162 HIST3H2BBQ8N257 126 aa8.01□□□□□ -1.13
SNRNP27-203ENST00000450162 MIR7-3HGQ8N6C7 128 aa8.01□□□□□ -1.13
SNRNP27-203ENST00000450162 LOC107984156A0A0G2JMH3 177 aa8□□□□□ -1.13
SNRNP27-203ENST00000450162 ARL17AQ8IVW1 177 aa8□□□□□ -1.13
SNRNP27-203ENST00000450162 DIRC1Q969H9 104 aa8□□□□□ -1.13
SNRNP27-203ENST00000450162 SNRPEP62304 92 aaKnown RBP7.99□□□□□ -1.13
SNRNP27-203ENST00000450162 HIST1H2BLQ99880 126 aa7.99□□□□□ -1.13
SNRNP27-203ENST00000450162 IGLV1-50A0A075B6I6 118 aa7.98□□□□□ -1.13
SNRNP27-203ENST00000450162 IGKV2D-26A0A0A0MRZ7 120 aa7.98□□□□□ -1.13
SNRNP27-203ENST00000450162 BOD1L2Q8IYS8 172 aa7.98□□□□□ -1.13
SNRNP27-203ENST00000450162 A0A0J9YXY3 114 aa7.97□□□□□ -1.13
SNRNP27-203ENST00000450162 GAGE10A6NGK3 116 aa7.97□□□□□ -1.13
SNRNP27-203ENST00000450162 RPL37AP8A6NKH3 93 aa7.97□□□□□ -1.13
SNRNP27-203ENST00000450162 M0R378 163 aa7.97□□□□□ -1.13
SNRNP27-203ENST00000450162 ZNF861PO60384 105 aa7.97□□□□□ -1.13
SNRNP27-203ENST00000450162 BCE1O60756 84 aa7.97□□□□□ -1.13
SNRNP27-203ENST00000450162 LINC01600Q96MT4 127 aa7.97□□□□□ -1.13
SNRNP27-203ENST00000450162 RPL28P46779 137 aaKnown RBP7.96□□□□□ -1.14
SNRNP27-203ENST00000450162 MIEN1Q9BRT3 115 aa7.96□□□□□ -1.14
SNRNP27-203ENST00000450162 C5orf52A6NGY3 159 aa7.95□□□□□ -1.14
SNRNP27-203ENST00000450162 H0Y9J4 135 aa7.95□□□□□ -1.14
SNRNP27-203ENST00000450162 TIMM17BO60830 172 aa7.95□□□□□ -1.14
SNRNP27-203ENST00000450162 IGKV2-28A0A075B6P5 120 aa7.94□□□□□ -1.14
SNRNP27-203ENST00000450162 ZNF815PA8K554 130 aa7.94□□□□□ -1.14
SNRNP27-203ENST00000450162 IGKV2D-28P01615 120 aa7.94□□□□□ -1.14
SNRNP27-203ENST00000450162 PKHD1L1Q86WI1 4243 aa7.94□□□□□ -1.14
SNRNP27-203ENST00000450162 LRP1Q07954 4544 aaKnown RBP7.93□□□□□ -1.14
SNRNP27-203ENST00000450162 TRBV10-2A0A0K0K1G8 114 aa7.93□□□□□ -1.14
SNRNP27-203ENST00000450162 NDUFC2O95298 119 aa7.93□□□□□ -1.14
SNRNP27-203ENST00000450162 S100A12P80511 92 aa7.93□□□□□ -1.14
SNRNP27-203ENST00000450162 DAND5Q8N907 189 aa7.93□□□□□ -1.14
SNRNP27-203ENST00000450162 Q8NDZ9 215 aa7.93□□□□□ -1.14
SNRNP27-203ENST00000450162 TMEM126AQ9H061 195 aa7.92□□□□□ -1.14
SNRNP27-203ENST00000450162 HSBP1L1C9JCN9 74 aa7.91□□□□□ -1.14
SNRNP27-203ENST00000450162 UBE2AP49459 152 aa7.91□□□□□ -1.14
SNRNP27-203ENST00000450162 ADAMTSL4-AS1Q5T5F5 129 aa7.91□□□□□ -1.14
SNRNP27-203ENST00000450162 ATOH7Q8N100 152 aa7.91□□□□□ -1.14
SNRNP27-203ENST00000450162 SPANXB1Q9NS25 103 aaPredicted RBP7.91□□□□□ -1.14
SNRNP27-203ENST00000450162 FAT3Q8TDW7 4589 aa7.9□□□□□ -1.14
SNRNP27-203ENST00000450162 MT1HL1P0DM35 61 aa7.9□□□□□ -1.14
SNRNP27-203ENST00000450162 ANKRD39Q53RE8 183 aa7.9□□□□□ -1.14
SNRNP27-203ENST00000450162 SCGB1D4Q6XE38 83 aa7.9□□□□□ -1.14
SNRNP27-203ENST00000450162 COPS9Q8WXC6 57 aa7.9□□□□□ -1.14
SNRNP27-203ENST00000450162 LITAFQ99732 161 aa7.9□□□□□ -1.14
SNRNP27-203ENST00000450162 KCNQ1DNQ9H478 68 aa7.9□□□□□ -1.14
SNRNP27-203ENST00000450162 TMEM238C9JI98 176 aa7.89□□□□□ -1.15
SNRNP27-203ENST00000450162 PRYO14603 147 aa7.89□□□□□ -1.15
SNRNP27-203ENST00000450162 KRTAP10-8P60410 259 aa7.89□□□□□ -1.15
SNRNP27-203ENST00000450162 Q6ZVH6 145 aa7.89□□□□□ -1.15
SNRNP27-203ENST00000450162 KRTAP13-1Q8IUC0 172 aa7.89□□□□□ -1.15
SNRNP27-203ENST00000450162 NCR3O14931 201 aa7.88□□□□□ -1.15
SNRNP27-203ENST00000450162 FAM19A1Q7Z5A9 133 aa7.88□□□□□ -1.15
SNRNP27-203ENST00000450162 LINC00308Q8TCZ7 52 aa7.88□□□□□ -1.15
SNRNP27-203ENST00000450162 TTTY13Q9BZ97 58 aa7.88□□□□□ -1.15
SNRNP27-203ENST00000450162 CBY1Q9Y3M2 126 aa7.88□□□□□ -1.15
SNRNP27-203ENST00000450162 TRBV10-3A0A0K0K1G6 114 aa7.87□□□□□ -1.15
SNRNP27-203ENST00000450162 SCGB1D1O95968 90 aa7.87□□□□□ -1.15
SNRNP27-203ENST00000450162 LINC00337Q8N6G1 96 aa7.87□□□□□ -1.15
SNRNP27-203ENST00000450162 PPDPFQ9H3Y8 114 aa7.87□□□□□ -1.15
SNRNP27-203ENST00000450162 SPANXCQ9NY87 97 aa7.87□□□□□ -1.15
SNRNP27-203ENST00000450162 IFITM1P13164 125 aa7.86□□□□□ -1.15
SNRNP27-203ENST00000450162 DDTP30046 118 aa7.86□□□□□ -1.15
SNRNP27-203ENST00000450162 SPRR1AP35321 89 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms