RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 PRO0461Q9UI25 63 aa15.5■□□□□ 0.07
CTDSPL-206ENST00000443503 A0A096LNT2 108 aa15.5■□□□□ 0.07
CTDSPL-206ENST00000443503 ESRGQ1W209 222 aa15.49■□□□□ 0.07
CTDSPL-206ENST00000443503 REG3GQ6UW15 175 aa15.48■□□□□ 0.07
CTDSPL-206ENST00000443503 NUPR2A6NF83 97 aa15.48■□□□□ 0.07
CTDSPL-206ENST00000443503 C10orf25Q5T742 122 aa15.45■□□□□ 0.06
CTDSPL-206ENST00000443503 MRPL55Q7Z7F7 128 aaKnown RBP15.45■□□□□ 0.06
CTDSPL-206ENST00000443503 MPLKIPQ8TAP9 179 aa15.44■□□□□ 0.06
CTDSPL-206ENST00000443503 ZNF706Q9Y5V0 76 aaPredicted RBP15.44■□□□□ 0.06
CTDSPL-206ENST00000443503 PRR4Q16378 134 aa15.43■□□□□ 0.06
CTDSPL-206ENST00000443503 FAM218AQ96MZ4 157 aa15.43■□□□□ 0.06
CTDSPL-206ENST00000443503 F8WDY8 70 aa15.42■□□□□ 0.06
CTDSPL-206ENST00000443503 KRTAP24-1Q3LI83 254 aa15.42■□□□□ 0.06
CTDSPL-206ENST00000443503 LINC01556Q5JQF7 62 aa15.42■□□□□ 0.06
CTDSPL-206ENST00000443503 C6orf48Q9UBA6 75 aa15.41■□□□□ 0.06
CTDSPL-206ENST00000443503 CHD6Q8TD26 2715 aa15.41■□□□□ 0.06
CTDSPL-206ENST00000443503 Q8NAQ8 132 aa15.4■□□□□ 0.06
CTDSPL-206ENST00000443503 NDUFC1O43677 76 aa15.39■□□□□ 0.05
CTDSPL-206ENST00000443503 SBSPONQ8IVN8 264 aa15.39■□□□□ 0.05
CTDSPL-206ENST00000443503 FAM30AQ9NZY2 134 aa15.39■□□□□ 0.05
CTDSPL-206ENST00000443503 TEP1Q99973 2627 aaKnown RBP15.39■□□□□ 0.05
CTDSPL-206ENST00000443503 Q6ZVQ6 151 aa15.38■□□□□ 0.05
CTDSPL-206ENST00000443503 LITAFQ99732 161 aa15.37■□□□□ 0.05
CTDSPL-206ENST00000443503 TRAV7A0A075B6U4 112 aa15.37■□□□□ 0.05
CTDSPL-206ENST00000443503 PRYO14603 147 aa15.37■□□□□ 0.05
CTDSPL-206ENST00000443503 BRK1Q8WUW1 75 aa15.36■□□□□ 0.05
CTDSPL-206ENST00000443503 PRLHP81277 87 aa15.35■□□□□ 0.05
CTDSPL-206ENST00000443503 C22orf24Q9Y442 160 aa15.35■□□□□ 0.05
CTDSPL-206ENST00000443503 A0A087WSZ3 146 aa15.33■□□□□ 0.05
CTDSPL-206ENST00000443503 CSNK1G2-AS1Q8NCQ2 148 aa15.32■□□□□ 0.04
CTDSPL-206ENST00000443503 Q9BRP9 147 aa15.32■□□□□ 0.04
CTDSPL-206ENST00000443503 H3BNG1 76 aa15.31■□□□□ 0.04
CTDSPL-206ENST00000443503 SZT2Q5T011 3432 aa15.31■□□□□ 0.04
CTDSPL-206ENST00000443503 LAMA1P25391 3075 aa15.3■□□□□ 0.04
CTDSPL-206ENST00000443503 FRYQ5TBA9 3013 aa15.29■□□□□ 0.04
CTDSPL-206ENST00000443503 LINC01547P58512 204 aaPredicted RBP15.28■□□□□ 0.04
CTDSPL-206ENST00000443503 EIF4EBP3O60516 100 aaPredicted RBP15.28■□□□□ 0.04
CTDSPL-206ENST00000443503 TRBV7-7A0A0K0K1E9 115 aa15.28■□□□□ 0.04
CTDSPL-206ENST00000443503 DEFB116Q30KQ4 102 aa15.27■□□□□ 0.03
CTDSPL-206ENST00000443503 IGLV5-52A0A0A0MRZ9 124 aa15.27■□□□□ 0.03
CTDSPL-206ENST00000443503 GIG44P09565 113 aaPredicted RBP15.27■□□□□ 0.03
CTDSPL-206ENST00000443503 CELSR3Q9NYQ7 3312 aa15.27■□□□□ 0.03
CTDSPL-206ENST00000443503 ATP5EP56381 51 aaPredicted RBP15.26■□□□□ 0.03
CTDSPL-206ENST00000443503 LINC00167Q96N53 147 aa15.26■□□□□ 0.03
CTDSPL-206ENST00000443503 CASC2Q6XLA1 102 aa15.25■□□□□ 0.03
CTDSPL-206ENST00000443503 C19orf73Q9NVV2 129 aa15.24■□□□□ 0.03
CTDSPL-206ENST00000443503 KIAA0087Q14695 138 aa15.24■□□□□ 0.03
CTDSPL-206ENST00000443503 Q8N9L7 120 aa15.24■□□□□ 0.03
CTDSPL-206ENST00000443503 LINC00208Q96KT6 92 aa15.23■□□□□ 0.03
CTDSPL-206ENST00000443503 SPATA3Q8NHX4 192 aa15.23■□□□□ 0.03
CTDSPL-206ENST00000443503 VCANP13611 3396 aa15.23■□□□□ 0.03
CTDSPL-206ENST00000443503 SMCR5Q8TEV8 140 aa15.22■□□□□ 0.03
CTDSPL-206ENST00000443503 TEX15Q9BXT5 2789 aa15.22■□□□□ 0.03
CTDSPL-206ENST00000443503 CIRBP-AS1Q8TBR5 109 aa15.21■□□□□ 0.03
CTDSPL-206ENST00000443503 C1orf134Q5TEV5 83 aa15.18■□□□□ 0.02
CTDSPL-206ENST00000443503 MDFIQ99750 246 aa15.17■□□□□ 0.02
CTDSPL-206ENST00000443503 NHLRC4P0CG21 123 aaPredicted RBP15.17■□□□□ 0.02
CTDSPL-206ENST00000443503 LINC00588Q9Y4M8 146 aa15.16■□□□□ 0.02
CTDSPL-206ENST00000443503 KRTAP1-3Q8IUG1 177 aa15.16■□□□□ 0.02
CTDSPL-206ENST00000443503 STAB1Q9NY15 2570 aa15.15■□□□□ 0.02
CTDSPL-206ENST00000443503 ELOF1P60002 83 aaKnown RBP15.15■□□□□ 0.02
CTDSPL-206ENST00000443503 SPTSSBQ8NFR3 76 aa15.15■□□□□ 0.02
CTDSPL-206ENST00000443503 ZNF575Q86XF7 245 aa15.15■□□□□ 0.02
CTDSPL-206ENST00000443503 KRTAP10-3P60369 221 aa15.14■□□□□ 0.01
CTDSPL-206ENST00000443503 IGHV6-1A0A0B4J1U7 121 aa15.14■□□□□ 0.01
CTDSPL-206ENST00000443503 SEC61GP60059 68 aa15.12■□□□□ 0.01
CTDSPL-206ENST00000443503 CXCL6P80162 114 aa15.12■□□□□ 0.01
CTDSPL-206ENST00000443503 TMEM254Q8TBM7 123 aa15.11■□□□□ 0.01
CTDSPL-206ENST00000443503 IGSF10Q6WRI0 2623 aa15.11■□□□□ 0.01
CTDSPL-206ENST00000443503 NBEAQ8NFP9 2946 aa15.09■□□□□ 0.01
CTDSPL-206ENST00000443503 Q6ZRP5 223 aa15.09■□□□□ 0.01
CTDSPL-206ENST00000443503 SMIM26A0A096LP01 95 aa15.08■□□□□ 0
CTDSPL-206ENST00000443503 TRBV7-6A0A0J9YX20 115 aa15.08■□□□□ 0
CTDSPL-206ENST00000443503 GVQW2A0A096LPI5 108 aaPredicted RBP15.08■□□□□ 0
CTDSPL-206ENST00000443503 SETXQ7Z333 2677 aaKnown RBP15.07■□□□□ 0
CTDSPL-206ENST00000443503 FREM2Q5SZK8 3169 aa15.07■□□□□ 0
CTDSPL-206ENST00000443503 NOTCH1P46531 2555 aa15.07■□□□□ 0
CTDSPL-206ENST00000443503 Q6ZQT0 140 aa15.07■□□□□ 0
CTDSPL-206ENST00000443503 COL6A5A8TX70 2615 aa15.06■□□□□ 0
CTDSPL-206ENST00000443503 GCN1Q92616 2671 aaKnown RBP15.06■□□□□ 0
CTDSPL-206ENST00000443503 A0A0U1RQV1 116 aa15.06■□□□□ 0
CTDSPL-206ENST00000443503 VPREB1P12018 145 aa15.05■□□□□ 0
CTDSPL-206ENST00000443503 Q6ZRX8 168 aa15.05■□□□□ 0
CTDSPL-206ENST00000443503 KRTAP1-1Q07627 177 aa15.05■□□□□ -0
CTDSPL-206ENST00000443503 SERP1Q9Y6X1 66 aa15.05■□□□□ -0
CTDSPL-206ENST00000443503 HCG22E2RYF7 251 aa15.04■□□□□ -0
CTDSPL-206ENST00000443503 V9GYY9 64 aa15.04■□□□□ -0
CTDSPL-206ENST00000443503 DNAH14Q0VDD8 3507 aa15.03■□□□□ -0
CTDSPL-206ENST00000443503 UNC79Q9P2D8 2635 aa15.03■□□□□ -0
CTDSPL-206ENST00000443503 DNAH10OSP0CZ25 163 aa15.03■□□□□ -0
CTDSPL-206ENST00000443503 LINC00612Q8N6U2 182 aa15.02■□□□□ -0
CTDSPL-206ENST00000443503 IGLV6-57P01721 117 aa15.02□□□□□ -0.01
CTDSPL-206ENST00000443503 KRTAP10-11P60412 298 aa15.02□□□□□ -0.01
CTDSPL-206ENST00000443503 PHF5AQ7RTV0 110 aaKnown RBP15.01□□□□□ -0.01
CTDSPL-206ENST00000443503 ST20-AS1Q8NBB2 130 aa15.01□□□□□ -0.01
CTDSPL-206ENST00000443503 PRR34Q9NV39 138 aa15.01□□□□□ -0.01
CTDSPL-206ENST00000443503 PCOTHQ58A44 107 aa14.99□□□□□ -0.01
CTDSPL-206ENST00000443503 FLNCQ14315 2725 aa14.99□□□□□ -0.01
CTDSPL-206ENST00000443503 UBR5O95071 2799 aaPredicted RBP14.99□□□□□ -0.01
CTDSPL-206ENST00000443503 FRYLO94915 3013 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms