RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 M0QXV9 152 aa7.67□□□□□ -1.18
USP1-203ENST00000442679 LGALS3P17931 250 aaKnown RBP7.67□□□□□ -1.18
USP1-203ENST00000442679 SNRPEP62304 92 aaKnown RBP7.67□□□□□ -1.18
USP1-203ENST00000442679 A0A0U1RRA0 63 aa7.66□□□□□ -1.18
USP1-203ENST00000442679 E9PLD3 99 aa7.66□□□□□ -1.18
USP1-203ENST00000442679 SMIM13P0DJ93 91 aa7.66□□□□□ -1.18
USP1-203ENST00000442679 PRR3P79522 188 aaKnown RBP7.66□□□□□ -1.18
USP1-203ENST00000442679 MEIG1Q5JSS6 88 aa7.66□□□□□ -1.18
USP1-203ENST00000442679 SND1-IT1Q9HBX3 110 aa7.66□□□□□ -1.18
USP1-203ENST00000442679 C22orf24Q9Y442 160 aa7.66□□□□□ -1.18
USP1-203ENST00000442679 LINC00587B1AMM8 73 aa7.65□□□□□ -1.18
USP1-203ENST00000442679 NMUP48645 174 aa7.65□□□□□ -1.18
USP1-203ENST00000442679 PLA2G2DQ9UNK4 145 aa7.65□□□□□ -1.18
USP1-203ENST00000442679 C5orf52A6NGY3 159 aa7.64□□□□□ -1.19
USP1-203ENST00000442679 HNRNPA3P51991 378 aaKnown RBP7.64□□□□□ -1.19
USP1-203ENST00000442679 UBE2BP63146 152 aa7.64□□□□□ -1.19
USP1-203ENST00000442679 LBHQ53QV2 105 aaPredicted RBP7.64□□□□□ -1.19
USP1-203ENST00000442679 PSORS1C2Q9UIG4 136 aa7.64□□□□□ -1.19
USP1-203ENST00000442679 MYCBP2O75592 4640 aa7.64□□□□□ -1.19
USP1-203ENST00000442679 AKR1D1P51857 326 aa7.63□□□□□ -1.19
USP1-203ENST00000442679 KRTAP11-1Q8IUC1 163 aa7.63□□□□□ -1.19
USP1-203ENST00000442679 IGLV5-37A0A075B6J1 123 aa7.62□□□□□ -1.19
USP1-203ENST00000442679 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
USP1-203ENST00000442679 MRPL55Q7Z7F7 128 aaKnown RBP7.62□□□□□ -1.19
USP1-203ENST00000442679 ATOH7Q8N100 152 aa7.62□□□□□ -1.19
USP1-203ENST00000442679 MIR7-3HGQ8N6C7 128 aa7.62□□□□□ -1.19
USP1-203ENST00000442679 NKAPP1Q8N9T2 125 aa7.62□□□□□ -1.19
USP1-203ENST00000442679 KRTAP4-6Q9BYQ5 205 aa7.62□□□□□ -1.19
USP1-203ENST00000442679 TP73-AS1Q9UF72 201 aa7.62□□□□□ -1.19
USP1-203ENST00000442679 RPL24P83731 157 aaKnown RBP7.61□□□□□ -1.19
USP1-203ENST00000442679 C1orf137Q5JT78 98 aa7.61□□□□□ -1.19
USP1-203ENST00000442679 LINC00167Q96N53 147 aa7.61□□□□□ -1.19
USP1-203ENST00000442679 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
USP1-203ENST00000442679 IGKV2D-26A0A0A0MRZ7 120 aa7.6□□□□□ -1.19
USP1-203ENST00000442679 GAGE10A6NGK3 116 aa7.6□□□□□ -1.19
USP1-203ENST00000442679 A0A0J9YXY3 114 aa7.59□□□□□ -1.19
USP1-203ENST00000442679 VPREB1P12018 145 aa7.59□□□□□ -1.19
USP1-203ENST00000442679 DAND5Q8N907 189 aa7.59□□□□□ -1.19
USP1-203ENST00000442679 Q8NDZ9 215 aa7.59□□□□□ -1.19
USP1-203ENST00000442679 RPL37AP8A6NKH3 93 aa7.58□□□□□ -1.2
USP1-203ENST00000442679 ZNF815PA8K554 130 aa7.58□□□□□ -1.2
USP1-203ENST00000442679 ANKRD39Q53RE8 183 aa7.58□□□□□ -1.2
USP1-203ENST00000442679 BOD1L2Q8IYS8 172 aa7.58□□□□□ -1.2
USP1-203ENST00000442679 LRP1Q07954 4544 aaKnown RBP7.57□□□□□ -1.2
USP1-203ENST00000442679 SCGB1D1O95968 90 aa7.57□□□□□ -1.2
USP1-203ENST00000442679 SRSF9Q13242 221 aaKnown RBP eCLIP7.57□□□□□ -1.2
USP1-203ENST00000442679 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
USP1-203ENST00000442679 IGLV7-43P04211 117 aa7.56□□□□□ -1.2
USP1-203ENST00000442679 ADAMTSL4-AS1Q5T5F5 129 aa7.56□□□□□ -1.2
USP1-203ENST00000442679 SPINK6Q6UWN8 80 aa7.56□□□□□ -1.2
USP1-203ENST00000442679 IGKV2-28A0A075B6P5 120 aa7.55□□□□□ -1.2
USP1-203ENST00000442679 LOC107984156A0A0G2JMH3 177 aa7.55□□□□□ -1.2
USP1-203ENST00000442679 M0R378 163 aa7.55□□□□□ -1.2
USP1-203ENST00000442679 IGKV2D-28P01615 120 aa7.55□□□□□ -1.2
USP1-203ENST00000442679 ARL17AQ8IVW1 177 aa7.55□□□□□ -1.2
USP1-203ENST00000442679 SVIPQ8NHG7 77 aa7.55□□□□□ -1.2
USP1-203ENST00000442679 FLG2Q5D862 2391 aaPredicted RBP7.55□□□□□ -1.2
USP1-203ENST00000442679 IGLV1-50A0A075B6I6 118 aa7.54□□□□□ -1.2
USP1-203ENST00000442679 HSBP1L1C9JCN9 74 aa7.54□□□□□ -1.2
USP1-203ENST00000442679 TIMM17BO60830 172 aa7.54□□□□□ -1.2
USP1-203ENST00000442679 MIEN1Q9BRT3 115 aa7.54□□□□□ -1.2
USP1-203ENST00000442679 KRTAP29-1A8MX34 341 aaPredicted RBP7.53□□□□□ -1.2
USP1-203ENST00000442679 OXTP01178 125 aa7.53□□□□□ -1.2
USP1-203ENST00000442679 NPC2P61916 151 aa7.53□□□□□ -1.2
USP1-203ENST00000442679 PCP2Q8IVA1 136 aa7.53□□□□□ -1.2
USP1-203ENST00000442679 LITAFQ99732 161 aa7.53□□□□□ -1.2
USP1-203ENST00000442679 NCR3O14931 201 aa7.52□□□□□ -1.21
USP1-203ENST00000442679 BCE1O60756 84 aa7.52□□□□□ -1.21
USP1-203ENST00000442679 SCGB1D4Q6XE38 83 aa7.52□□□□□ -1.21
USP1-203ENST00000442679 SOSTDC1Q6X4U4 206 aa7.51□□□□□ -1.21
USP1-203ENST00000442679 DIRC1Q969H9 104 aa7.51□□□□□ -1.21
USP1-203ENST00000442679 TMEM238C9JI98 176 aa7.5□□□□□ -1.21
USP1-203ENST00000442679 ZNF861PO60384 105 aa7.5□□□□□ -1.21
USP1-203ENST00000442679 EIF4EBP3O60516 100 aaPredicted RBP7.5□□□□□ -1.21
USP1-203ENST00000442679 REG3GQ6UW15 175 aa7.5□□□□□ -1.21
USP1-203ENST00000442679 LINC00308Q8TCZ7 52 aa7.5□□□□□ -1.21
USP1-203ENST00000442679 TRBV10-2A0A0K0K1G8 114 aa7.49□□□□□ -1.21
USP1-203ENST00000442679 NDUFC2O95298 119 aa7.49□□□□□ -1.21
USP1-203ENST00000442679 RPL28P46779 137 aaKnown RBP7.49□□□□□ -1.21
USP1-203ENST00000442679 TMEM126AQ9H061 195 aa7.49□□□□□ -1.21
USP1-203ENST00000442679 SPANXB1Q9NS25 103 aaPredicted RBP7.49□□□□□ -1.21
USP1-203ENST00000442679 H0Y9J4 135 aa7.48□□□□□ -1.21
USP1-203ENST00000442679 TRBV10-3A0A0K0K1G6 114 aa7.47□□□□□ -1.21
USP1-203ENST00000442679 A6NJY4 79 aa7.47□□□□□ -1.21
USP1-203ENST00000442679 UBE2AP49459 152 aa7.47□□□□□ -1.21
USP1-203ENST00000442679 JOSD1Q15040 202 aaPredicted RBP7.47□□□□□ -1.21
USP1-203ENST00000442679 SPANXDQ9BXN6 97 aa7.47□□□□□ -1.21
USP1-203ENST00000442679 SPANXCQ9NY87 97 aa7.47□□□□□ -1.21
USP1-203ENST00000442679 HERC1Q15751 4861 aa7.47□□□□□ -1.21
USP1-203ENST00000442679 DDTP30046 118 aa7.46□□□□□ -1.22
USP1-203ENST00000442679 FAM19A1Q7Z5A9 133 aa7.46□□□□□ -1.22
USP1-203ENST00000442679 LINC01600Q96MT4 127 aa7.46□□□□□ -1.22
USP1-203ENST00000442679 KCNQ1DNQ9H478 68 aa7.46□□□□□ -1.22
USP1-203ENST00000442679 TNXBP22105 4242 aa7.46□□□□□ -1.22
USP1-203ENST00000442679 PRYO14603 147 aa7.45□□□□□ -1.22
USP1-203ENST00000442679 S100A12P80511 92 aa7.45□□□□□ -1.22
USP1-203ENST00000442679 S100A7L2Q5SY68 101 aa7.45□□□□□ -1.22
USP1-203ENST00000442679 Q6ZVH6 145 aa7.45□□□□□ -1.22
USP1-203ENST00000442679 KRTAP13-1Q8IUC0 172 aa7.45□□□□□ -1.22
USP1-203ENST00000442679 COPS9Q8WXC6 57 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms