RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-208	ENST00000436638	IGHV1-24	A0A0C4DH33	117 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638		M0QY20	66 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	PPP1R17	O96001	155 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	CKS2	P33552	79 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	LINC00315	P59091	139 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	HIST1H4A	P62805	103 aa	Known RBP	4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	KIAA0087	Q14695	138 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	TMEM170B	Q5T4T1	132 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	LINC00242	Q5T6M2	205 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	FAM104B	Q5XKR9	115 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	LINC01600	Q96MT4	127 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	TMEM243	Q9BU79	118 aa		4.24	□□□□□ -1.73
ECHDC1-208	ENST00000436638	UBE2A	P49459	152 aa		4.23	□□□□□ -1.73
ECHDC1-208	ENST00000436638	LYPD5	Q6UWN5	251 aa		4.23	□□□□□ -1.73
ECHDC1-208	ENST00000436638	PRSS3P2	Q8NHM4	247 aa		4.23	□□□□□ -1.73
ECHDC1-208	ENST00000436638	OPRPN	Q99935	248 aa	Predicted RBP	4.23	□□□□□ -1.73
ECHDC1-208	ENST00000436638	MEGF8	Q7Z7M0	2845 aa		4.23	□□□□□ -1.73
ECHDC1-208	ENST00000436638	IGHV3-38	A0A0C4DH36	116 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	UBE2D3	P61077	147 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	UBE2D2	P62837	147 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	SS18	Q15532	418 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	ESRG	Q1W209	222 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	MRPL51	Q4U2R6	128 aa	Known RBP	4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	LELP1	Q5T871	98 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	LINC00643	Q86TS7	51 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	ORMDL3	Q8N138	153 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638		Q8N8P6	123 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	NACA	E9PAV3	2078 aa		4.22	□□□□□ -1.73
ECHDC1-208	ENST00000436638	LCE6A	A0A183	80 aa		4.21	□□□□□ -1.74
ECHDC1-208	ENST00000436638	SDHAF1	A6NFY7	115 aa		4.21	□□□□□ -1.74
ECHDC1-208	ENST00000436638		D6R8Y8	96 aa		4.21	□□□□□ -1.74
ECHDC1-208	ENST00000436638	RPL39L	Q96EH5	51 aa	Known RBP	4.21	□□□□□ -1.74
ECHDC1-208	ENST00000436638	TRBV25-1	A0A075B6N4	114 aa		4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IGLV9-49	A0A0B4J1Y8	123 aa		4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638	TRBV6-5	A0A0K0K1A5	114 aa		4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638		I3L3M4	83 aa		4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638	FCER1G	P30273	86 aa		4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638	FUS	P35637	526 aa	Known RBP eCLIP	4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638	CIRBP	Q14011	172 aa	Known RBP	4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638	LINC01554	Q52M75	96 aa		4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638	DIRC1	Q969H9	104 aa		4.2	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IGLV2-18	A0A075B6J9	118 aa		4.19	□□□□□ -1.74
ECHDC1-208	ENST00000436638	TRBV6-8	A0A0A6YYG3	113 aa		4.19	□□□□□ -1.74
ECHDC1-208	ENST00000436638	NDUFC1	O43677	76 aa		4.19	□□□□□ -1.74
ECHDC1-208	ENST00000436638	NPY	P01303	97 aa		4.19	□□□□□ -1.74
ECHDC1-208	ENST00000436638	CCK	P06307	115 aa		4.19	□□□□□ -1.74
ECHDC1-208	ENST00000436638	LINC00173	Q6ZV60	143 aa		4.19	□□□□□ -1.74
ECHDC1-208	ENST00000436638	NRAC	Q8N912	160 aa		4.19	□□□□□ -1.74
ECHDC1-208	ENST00000436638	TENM3	Q9P273	2699 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	NBEAL2	Q6ZNJ1	2754 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IBA57-AS1	B1ANH7	110 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638		M0R2N4	97 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	GAS8-AS1	O95177	125 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IGHV3-30	P01768	117 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IGHV3-33	P01772	117 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IGHV3-30-3	P0DP02	117 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IGHV3-30-5	P0DP03	117 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	POLR2K	P53803	58 aa	Known RBP	4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	SCX	Q7RTU7	201 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	WFDC10B	Q8IUB3	73 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	DEFB104A	Q8WTQ1	72 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	SMIM2	Q9BVW6	85 aa		4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	NHP2	Q9NX24	153 aa	Known RBP	4.18	□□□□□ -1.74
ECHDC1-208	ENST00000436638	NTM-AS1	Q6ZSK4	140 aa		4.17	□□□□□ -1.74
ECHDC1-208	ENST00000436638	FAM218A	Q96MZ4	157 aa		4.17	□□□□□ -1.74
ECHDC1-208	ENST00000436638	CHCHD7	Q9BUK0	85 aa		4.17	□□□□□ -1.74
ECHDC1-208	ENST00000436638	NBDY	A0A0U1RRE5	68 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638		H7C423	109 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638		K7EMI3	77 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	TSHB	P01222	138 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	CRP	P02741	224 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	ANG	P03950	147 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IGKV2-30	P06310	120 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	DNAH10OS	P0CZ25	163 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	RBM3	P98179	157 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	LINC01556	Q5JQF7	62 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	ATP11AUN	Q6ZP68	121 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	UBE2W	Q96B02	151 aa		4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	CHCHD1	Q96BP2	118 aa	Known RBP	4.16	□□□□□ -1.74
ECHDC1-208	ENST00000436638	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	4.15	□□□□□ -1.75
ECHDC1-208	ENST00000436638	IGKV2-29	A2NJV5	120 aa	Predicted RBP	4.15	□□□□□ -1.75
ECHDC1-208	ENST00000436638	SLC25A20	O43772	301 aa		4.15	□□□□□ -1.75
ECHDC1-208	ENST00000436638	BCE1	O60756	84 aa		4.15	□□□□□ -1.75
ECHDC1-208	ENST00000436638	FXYD2	P54710	66 aa		4.15	□□□□□ -1.75
ECHDC1-208	ENST00000436638	RMI2	Q96E14	147 aa		4.15	□□□□□ -1.75
ECHDC1-208	ENST00000436638	KLK12	Q9UKR0	248 aa		4.15	□□□□□ -1.75
ECHDC1-208	ENST00000436638	MYMX	A0A1B0GTQ4	84 aa		4.14	□□□□□ -1.75
ECHDC1-208	ENST00000436638		A0A1B0GUV1	79 aa		4.14	□□□□□ -1.75
ECHDC1-208	ENST00000436638	IFI27	P40305	119 aa	Predicted RBP	4.14	□□□□□ -1.75
ECHDC1-208	ENST00000436638	C1orf134	Q5TEV5	83 aa		4.14	□□□□□ -1.75
ECHDC1-208	ENST00000436638	C20orf203	Q8NBC4	194 aa		4.14	□□□□□ -1.75
ECHDC1-208	ENST00000436638	CYSTM1	Q9H1C7	97 aa		4.14	□□□□□ -1.75
ECHDC1-208	ENST00000436638	IGKV3OR2-268	A0A0C4DH90	116 aa		4.13	□□□□□ -1.75
ECHDC1-208	ENST00000436638		A0A1B0GW54	56 aa		4.13	□□□□□ -1.75
ECHDC1-208	ENST00000436638	LINC01549	A6NIU2	74 aa		4.13	□□□□□ -1.75
ECHDC1-208	ENST00000436638	PSCA	O43653	123 aa		4.13	□□□□□ -1.75
ECHDC1-208	ENST00000436638	LEPROTL1	O95214	131 aa		4.13	□□□□□ -1.75
ECHDC1-208	ENST00000436638	S100A7L2	Q5SY68	101 aa		4.13	□□□□□ -1.75

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