RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 WFDC13Q8IUB5 93 aa5.26□□□□□ -1.57
CPSF6-202ENST00000435070 CENPEQ02224 2701 aa5.25□□□□□ -1.57
CPSF6-202ENST00000435070 A8MTW9 85 aa5.25□□□□□ -1.57
CPSF6-202ENST00000435070 INAFM1C9JVW0 142 aa5.25□□□□□ -1.57
CPSF6-202ENST00000435070 TRAV7A0A075B6U4 112 aa5.25□□□□□ -1.57
CPSF6-202ENST00000435070 A0A087WZ39 114 aa5.25□□□□□ -1.57
CPSF6-202ENST00000435070 TMEM89A2RUT3 159 aa5.25□□□□□ -1.57
CPSF6-202ENST00000435070 LOC100131303A0A0U1RQF7 123 aa5.25□□□□□ -1.57
CPSF6-202ENST00000435070 C16orf95Q9H693 158 aa5.25□□□□□ -1.57
CPSF6-202ENST00000435070 C14orf177Q52M58 125 aa5.24□□□□□ -1.57
CPSF6-202ENST00000435070 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.24□□□□□ -1.57
CPSF6-202ENST00000435070 NAV2Q8IVL1 2488 aa5.24□□□□□ -1.57
CPSF6-202ENST00000435070 ZANQ9Y493 2812 aa5.24□□□□□ -1.57
CPSF6-202ENST00000435070 LY6G6CO95867 125 aa5.24□□□□□ -1.57
CPSF6-202ENST00000435070 C8orf87E5RJ46 101 aa5.24□□□□□ -1.57
CPSF6-202ENST00000435070 TM2D3Q9BRN9 247 aa5.24□□□□□ -1.57
CPSF6-202ENST00000435070 IGLV1-40P01703 118 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 F8WDY8 70 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 COX7BP24311 80 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 CHD6Q8TD26 2715 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 Q8N814 137 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 EPG5Q9HCE0 2579 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 CHD8Q9HCK8 2581 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 IGLV4-60A0A075B6I1 120 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 HIGD2AQ9BW72 106 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 FAM30AQ9NZY2 134 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 TRBV6-4A0A1B0GX49 114 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 LINC00482Q8N8I6 264 aa5.23□□□□□ -1.57
CPSF6-202ENST00000435070 NBEAL2Q6ZNJ1 2754 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 MUC6Q6W4X9 2439 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 LINC01547P58512 204 aaPredicted RBP5.22□□□□□ -1.57
CPSF6-202ENST00000435070 Q8N3U1 123 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 C6orf99Q4VX62 202 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 A6NDX4 124 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 ZNF73O43830 326 aaPredicted RBP5.22□□□□□ -1.57
CPSF6-202ENST00000435070 FAM229BQ4G0N7 80 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 VPS13CQ709C8 3753 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 ZNF843Q8N446 348 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 C7orf33Q8WU49 177 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 RETNLBQ9BQ08 111 aa5.22□□□□□ -1.57
CPSF6-202ENST00000435070 CR1P17927 2039 aa5.21□□□□□ -1.57
CPSF6-202ENST00000435070 SPINK1P00995 79 aa5.21□□□□□ -1.57
CPSF6-202ENST00000435070 C18orf65Q6ZTR6 163 aa5.21□□□□□ -1.57
CPSF6-202ENST00000435070 LINC00269Q8N2A0 174 aa5.21□□□□□ -1.57
CPSF6-202ENST00000435070 DEFB131BA0A096LNP1 70 aa5.21□□□□□ -1.58
CPSF6-202ENST00000435070 A0A096LNT2 108 aa5.21□□□□□ -1.58
CPSF6-202ENST00000435070 MAP6D1Q9H9H5 199 aa5.21□□□□□ -1.58
CPSF6-202ENST00000435070 IBA57-AS1B1ANH7 110 aa5.21□□□□□ -1.58
CPSF6-202ENST00000435070 CELSR2Q9HCU4 2923 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 PKD1L2Q7Z442 2459 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 LINC01554Q52M75 96 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 TRBV10-1A0A0K0K1A3 114 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 SPATA3Q8NHX4 192 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 FBN2P35556 2912 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 LRRK2Q5S007 2527 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 EPM2AB3EWF7 344 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 SPINK6Q6UWN8 80 aa5.2□□□□□ -1.58
CPSF6-202ENST00000435070 C9orf116Q5BN46 136 aaPredicted RBP5.19□□□□□ -1.58
CPSF6-202ENST00000435070 CCDC168Q8NDH2 2452 aa5.19□□□□□ -1.58
CPSF6-202ENST00000435070 LINC00208Q96KT6 92 aa5.19□□□□□ -1.58
CPSF6-202ENST00000435070 ACACBO00763 2458 aa5.19□□□□□ -1.58
CPSF6-202ENST00000435070 C3orf84H3BNL1 204 aa5.19□□□□□ -1.58
CPSF6-202ENST00000435070 REG3AQ06141 175 aa5.19□□□□□ -1.58
CPSF6-202ENST00000435070 SSBP3-AS1Q7Z2R9 100 aa5.19□□□□□ -1.58
CPSF6-202ENST00000435070 FAM208BQ5VWN6 2430 aa5.19□□□□□ -1.58
CPSF6-202ENST00000435070 IGHV3OR16-9A0A0B4J2B5 98 aa5.19□□□□□ -1.58
CPSF6-202ENST00000435070 NIPBLQ6KC79 2804 aaeCLIP5.19□□□□□ -1.583e-7■■■■■ 27.8
CPSF6-202ENST00000435070 LY6G6DO95868 133 aa5.18□□□□□ -1.58
CPSF6-202ENST00000435070 PRO0255Q9UI72 69 aa5.18□□□□□ -1.58
CPSF6-202ENST00000435070 TRBV10-3A0A0K0K1G6 114 aa5.18□□□□□ -1.58
CPSF6-202ENST00000435070 Q6ZQT0 140 aa5.18□□□□□ -1.58
CPSF6-202ENST00000435070 APCP25054 2843 aa5.17□□□□□ -1.58
CPSF6-202ENST00000435070 FBXL19-AS1Q494R0 122 aa5.17□□□□□ -1.58
CPSF6-202ENST00000435070 XAGE1AQ9HD64 81 aa5.17□□□□□ -1.58
CPSF6-202ENST00000435070 SPTBN4Q9H254 2564 aa5.17□□□□□ -1.58
CPSF6-202ENST00000435070 PIEZO1Q92508 2521 aa5.17□□□□□ -1.58
CPSF6-202ENST00000435070 LIMD2Q9BT23 127 aa5.17□□□□□ -1.58
CPSF6-202ENST00000435070 CACNA1AO00555 2505 aa5.16□□□□□ -1.58
CPSF6-202ENST00000435070 IGLV9-49A0A0B4J1Y8 123 aa5.16□□□□□ -1.58
CPSF6-202ENST00000435070 CHCHD10Q8WYQ3 142 aaPredicted RBP5.16□□□□□ -1.58
CPSF6-202ENST00000435070 NUPR2A6NF83 97 aa5.16□□□□□ -1.58
CPSF6-202ENST00000435070 GCN1Q92616 2671 aaKnown RBP5.15□□□□□ -1.58
CPSF6-202ENST00000435070 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.15□□□□□ -1.58
CPSF6-202ENST00000435070 Q6YL49 198 aa5.15□□□□□ -1.58
CPSF6-202ENST00000435070 ATP11AUNQ6ZP68 121 aa5.15□□□□□ -1.59
CPSF6-202ENST00000435070 PLAC8L1A1L4L8 177 aa5.15□□□□□ -1.59
CPSF6-202ENST00000435070 PCOTHQ58A44 107 aa5.15□□□□□ -1.59
CPSF6-202ENST00000435070 PRO3102Q9H379 93 aa5.15□□□□□ -1.59
CPSF6-202ENST00000435070 F8P00451 2351 aa5.15□□□□□ -1.59
CPSF6-202ENST00000435070 MXRA5Q9NR99 2828 aa5.14□□□□□ -1.59
CPSF6-202ENST00000435070 LINC00959A0A1B0GUT2 108 aa5.14□□□□□ -1.59
CPSF6-202ENST00000435070 Q8NDZ9 215 aa5.14□□□□□ -1.59
CPSF6-202ENST00000435070 NF1P21359 2839 aa5.14□□□□□ -1.59
CPSF6-202ENST00000435070 A0A1B0GU69 56 aa5.14□□□□□ -1.59
CPSF6-202ENST00000435070 BBC3Q96PG8 261 aaPredicted RBP5.14□□□□□ -1.59
CPSF6-202ENST00000435070 ESRGQ1W209 222 aa5.14□□□□□ -1.59
CPSF6-202ENST00000435070 TRBV7-4A0A0J9YYF1 115 aa5.13□□□□□ -1.59
CPSF6-202ENST00000435070 LINC00575Q6W349 94 aa5.13□□□□□ -1.59
CPSF6-202ENST00000435070 PRLHP81277 87 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms