RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 CCKP06307 115 aa7.98□□□□□ -1.13
CD44-209ENST00000433892 PRR34Q9NV39 138 aa7.98□□□□□ -1.13
CD44-209ENST00000433892 A0A0J9YWU9 116 aa7.96□□□□□ -1.13
CD44-209ENST00000433892 JMJD7-PLA2G4BH0Y9G9 81 aa7.96□□□□□ -1.13
CD44-209ENST00000433892 RPL18AQ02543 176 aaKnown RBP7.96□□□□□ -1.14
CD44-209ENST00000433892 Q6JHZ5 121 aa7.96□□□□□ -1.14
CD44-209ENST00000433892 LYPD5Q6UWN5 251 aa7.96□□□□□ -1.14
CD44-209ENST00000433892 LINC00575Q6W349 94 aa7.95□□□□□ -1.14
CD44-209ENST00000433892 A0A087WVE0 104 aa7.95□□□□□ -1.14
CD44-209ENST00000433892 HIST1H4AP62805 103 aaKnown RBP7.95□□□□□ -1.14
CD44-209ENST00000433892 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
CD44-209ENST00000433892 WFDC9Q8NEX5 89 aa7.94□□□□□ -1.14
CD44-209ENST00000433892 C9orf153Q5TBE3 101 aa7.94□□□□□ -1.14
CD44-209ENST00000433892 XAGE1AQ9HD64 81 aa7.94□□□□□ -1.14
CD44-209ENST00000433892 hADV29S1A0JD25 119 aa7.93□□□□□ -1.14
CD44-209ENST00000433892 UQCRQO14949 82 aa7.93□□□□□ -1.14
CD44-209ENST00000433892 IGLV6-57P01721 117 aa7.93□□□□□ -1.14
CD44-209ENST00000433892 C6orf48Q9UBA6 75 aa7.93□□□□□ -1.14
CD44-209ENST00000433892 MUC7Q8TAX7 377 aa7.92□□□□□ -1.14
CD44-209ENST00000433892 WFDC10BQ8IUB3 73 aa7.92□□□□□ -1.14
CD44-209ENST00000433892 RETNQ9HD89 108 aa7.92□□□□□ -1.14
CD44-209ENST00000433892 ATOX1O00244 68 aa7.91□□□□□ -1.14
CD44-209ENST00000433892 GVQW2A0A096LPI5 108 aaPredicted RBP7.91□□□□□ -1.14
CD44-209ENST00000433892 TRBV10-3A0A0K0K1G6 114 aa7.91□□□□□ -1.14
CD44-209ENST00000433892 COX7CP15954 63 aa7.91□□□□□ -1.14
CD44-209ENST00000433892 HIGD2BQ4VC39 106 aa7.91□□□□□ -1.14
CD44-209ENST00000433892 C2orf48Q96LS8 159 aa7.91□□□□□ -1.14
CD44-209ENST00000433892 TENM3Q9P273 2699 aa7.91□□□□□ -1.14
CD44-209ENST00000433892 WIPF1O43516 503 aa7.9□□□□□ -1.14
CD44-209ENST00000433892 OXLD1Q5BKU9 147 aa7.9□□□□□ -1.14
CD44-209ENST00000433892 SMIM20Q8N5G0 67 aa7.9□□□□□ -1.14
CD44-209ENST00000433892 KPRPQ5T749 579 aaPredicted RBP7.9□□□□□ -1.15
CD44-209ENST00000433892 Q6ZQY7 126 aa7.89□□□□□ -1.15
CD44-209ENST00000433892 LAMTOR3Q9UHA4 124 aa7.89□□□□□ -1.15
CD44-209ENST00000433892 ZNF561-AS1K7EIQ3 104 aa7.89□□□□□ -1.15
CD44-209ENST00000433892 RBM3P98179 157 aaKnown RBP7.89□□□□□ -1.15
CD44-209ENST00000433892 TRAV23DV6A0A075B6W5 121 aa7.88□□□□□ -1.15
CD44-209ENST00000433892 Q6ZTC4 211 aa7.88□□□□□ -1.15
CD44-209ENST00000433892 CAMK2N2Q96S95 79 aa7.87□□□□□ -1.15
CD44-209ENST00000433892 USP17L23D6RBM5 183 aa7.87□□□□□ -1.15
CD44-209ENST00000433892 KRTAP10-11P60412 298 aa7.87□□□□□ -1.15
CD44-209ENST00000433892 Q6ZQT0 140 aa7.87□□□□□ -1.15
CD44-209ENST00000433892 CMYA5Q8N3K9 4069 aa7.86□□□□□ -1.15
CD44-209ENST00000433892 SVIPQ8NHG7 77 aa7.86□□□□□ -1.15
CD44-209ENST00000433892 DIRC1Q969H9 104 aa7.86□□□□□ -1.15
CD44-209ENST00000433892 UBL5Q9BZL1 73 aa7.86□□□□□ -1.15
CD44-209ENST00000433892 STAB1Q9NY15 2570 aa7.86□□□□□ -1.15
CD44-209ENST00000433892 M0R2N4 97 aa7.86□□□□□ -1.15
CD44-209ENST00000433892 KRTAP26-1Q6PEX3 210 aa7.86□□□□□ -1.15
CD44-209ENST00000433892 ZNF73O43830 326 aaPredicted RBP7.85□□□□□ -1.15
CD44-209ENST00000433892 FAM19A1Q7Z5A9 133 aa7.85□□□□□ -1.15
CD44-209ENST00000433892 CRYGAP11844 174 aa7.85□□□□□ -1.15
CD44-209ENST00000433892 Q6ZRU5 148 aa7.85□□□□□ -1.15
CD44-209ENST00000433892 FBN1P35555 2871 aaKnown RBP7.84□□□□□ -1.15
CD44-209ENST00000433892 LOC110117498A0A087WWA1 95 aa7.84□□□□□ -1.15
CD44-209ENST00000433892 H3BNG1 76 aa7.84□□□□□ -1.15
CD44-209ENST00000433892 ESRGQ1W209 222 aa7.84□□□□□ -1.15
CD44-209ENST00000433892 ATP5EP2Q5VTU8 51 aa7.84□□□□□ -1.15
CD44-209ENST00000433892 VPREB1P12018 145 aa7.83□□□□□ -1.16
CD44-209ENST00000433892 SERP2Q8N6R1 65 aa7.83□□□□□ -1.16
CD44-209ENST00000433892 C15orf56Q8N910 161 aa7.83□□□□□ -1.16
CD44-209ENST00000433892 DSCR8Q96T75 97 aa7.83□□□□□ -1.16
CD44-209ENST00000433892 CYSTM1Q9H1C7 97 aa7.83□□□□□ -1.16
CD44-209ENST00000433892 COX7BP24311 80 aa7.83□□□□□ -1.16
CD44-209ENST00000433892 EGFEM1PQ0D2K5 195 aa7.82□□□□□ -1.16
CD44-209ENST00000433892 FLNBO75369 2602 aaKnown RBP7.82□□□□□ -1.16
CD44-209ENST00000433892 F8P00451 2351 aa7.82□□□□□ -1.16
CD44-209ENST00000433892 NOTCH1P46531 2555 aa7.81□□□□□ -1.16
CD44-209ENST00000433892 ELOF1P60002 83 aaKnown RBP7.81□□□□□ -1.16
CD44-209ENST00000433892 NDUFC2-KCTD14E9PQ53 114 aa7.81□□□□□ -1.16
CD44-209ENST00000433892 UPK3BQ9BT76 320 aa7.81□□□□□ -1.16
CD44-209ENST00000433892 IGKV2D-24A0A075B6R9 120 aa7.8□□□□□ -1.16
CD44-209ENST00000433892 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.8□□□□□ -1.16
CD44-209ENST00000433892 C1orf43Q9BWL3 253 aa7.8□□□□□ -1.16
CD44-209ENST00000433892 MAST4O15021 2626 aa7.8□□□□□ -1.16
CD44-209ENST00000433892 M0R378 163 aa7.8□□□□□ -1.16
CD44-209ENST00000433892 Q6ZRP5 223 aa7.8□□□□□ -1.16
CD44-209ENST00000433892 HAMPP81172 84 aa7.79□□□□□ -1.16
CD44-209ENST00000433892 DEFB131BA0A096LNP1 70 aa7.78□□□□□ -1.16
CD44-209ENST00000433892 H3BQ85 93 aa7.78□□□□□ -1.16
CD44-209ENST00000433892 GHRHP01286 108 aa7.78□□□□□ -1.16
CD44-209ENST00000433892 Q6ZVQ6 151 aa7.78□□□□□ -1.16
CD44-209ENST00000433892 LINC01547P58512 204 aaPredicted RBP7.78□□□□□ -1.16
CD44-209ENST00000433892 TRBV7-6A0A0J9YX20 115 aa7.77□□□□□ -1.17
CD44-209ENST00000433892 PDE6GP18545 87 aa7.77□□□□□ -1.17
CD44-209ENST00000433892 LINC01556Q5JQF7 62 aa7.77□□□□□ -1.17
CD44-209ENST00000433892 DNAH3Q8TD57 4116 aa7.77□□□□□ -1.17
CD44-209ENST00000433892 C11orf45Q8TAV5 145 aa7.76□□□□□ -1.17
CD44-209ENST00000433892 TRBV7-4A0A0J9YYF1 115 aa7.76□□□□□ -1.17
CD44-209ENST00000433892 LINC00528Q8N1L1 170 aa7.76□□□□□ -1.17
CD44-209ENST00000433892 SYCNQ0VAF6 134 aa7.75□□□□□ -1.17
CD44-209ENST00000433892 NBEAL1Q6ZS30 2694 aa7.74□□□□□ -1.17
CD44-209ENST00000433892 LOC107984640A0A0U1RRK4 108 aa7.74□□□□□ -1.17
CD44-209ENST00000433892 KRTAP24-1Q3LI83 254 aa7.73□□□□□ -1.17
CD44-209ENST00000433892 SERTAD4-AS1Q5TG53 156 aa7.72□□□□□ -1.17
CD44-209ENST00000433892 SCXQ7RTU7 201 aa7.72□□□□□ -1.17
CD44-209ENST00000433892 DNAH1Q9P2D7 4330 aa7.72□□□□□ -1.17
CD44-209ENST00000433892 NKAPP1Q8N9T2 125 aa7.71□□□□□ -1.17
CD44-209ENST00000433892 DNAH10OSP0CZ25 163 aa7.71□□□□□ -1.18
CD44-209ENST00000433892 TMEM258P61165 79 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms