RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 Q6ZSN1 163 aa7.52□□□□□ -1.21
TCOF1-204ENST00000427724 FAM236DA0A1B0GTK5 79 aa7.51□□□□□ -1.21
TCOF1-204ENST00000427724 FAM236CP0DP71 79 aa7.51□□□□□ -1.21
TCOF1-204ENST00000427724 FAM19A4Q96LR4 140 aa7.51□□□□□ -1.21
TCOF1-204ENST00000427724 LYPD5Q6UWN5 251 aa7.5□□□□□ -1.21
TCOF1-204ENST00000427724 FAM19A1Q7Z5A9 133 aa7.5□□□□□ -1.21
TCOF1-204ENST00000427724 Q9UF83 564 aa7.5□□□□□ -1.21
TCOF1-204ENST00000427724 C16orf90A8MZG2 172 aa7.49□□□□□ -1.21
TCOF1-204ENST00000427724 CHCHD7Q9BUK0 85 aa7.49□□□□□ -1.21
TCOF1-204ENST00000427724 UPK3BQ9BT76 320 aa7.49□□□□□ -1.21
TCOF1-204ENST00000427724 TRBV7-7A0A0K0K1E9 115 aa7.49□□□□□ -1.21
TCOF1-204ENST00000427724 C3orf84H3BNL1 204 aa7.49□□□□□ -1.21
TCOF1-204ENST00000427724 AMELXQ99217 191 aa7.49□□□□□ -1.21
TCOF1-204ENST00000427724 COX6A2Q02221 97 aa7.48□□□□□ -1.21
TCOF1-204ENST00000427724 LINC00242Q5T6M2 205 aa7.48□□□□□ -1.21
TCOF1-204ENST00000427724 CD164L2Q6UWJ8 174 aa7.48□□□□□ -1.21
TCOF1-204ENST00000427724 CUBNO60494 3623 aa7.48□□□□□ -1.21
TCOF1-204ENST00000427724 JMJD7-PLA2G4BH0Y9G9 81 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 ZNF575Q86XF7 245 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 MPLKIPQ8TAP9 179 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 ESRGQ1W209 222 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 SNURFQ9Y675 71 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 C6orf223Q8N319 242 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 BSNQ9UPA5 3926 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 LINC00959A0A1B0GUT2 108 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 X6R8D5 127 aa7.47□□□□□ -1.21
TCOF1-204ENST00000427724 TIMM17BO60830 172 aa7.46□□□□□ -1.21
TCOF1-204ENST00000427724 KMT2BQ9UMN6 2715 aaPredicted RBP7.46□□□□□ -1.21
TCOF1-204ENST00000427724 IGKV2-28A0A075B6P5 120 aa7.45□□□□□ -1.22
TCOF1-204ENST00000427724 IGKV2D-28P01615 120 aa7.45□□□□□ -1.22
TCOF1-204ENST00000427724 SCXQ7RTU7 201 aa7.45□□□□□ -1.22
TCOF1-204ENST00000427724 CDC42SE2Q9NRR3 84 aa7.45□□□□□ -1.22
TCOF1-204ENST00000427724 KLK9Q2XQG4 91 aa7.44□□□□□ -1.22
TCOF1-204ENST00000427724 DMBT1Q9UGM3 2413 aaPredicted RBP7.44□□□□□ -1.22
TCOF1-204ENST00000427724 SMIM1B2RUZ4 78 aa7.44□□□□□ -1.22
TCOF1-204ENST00000427724 SMIM11BQ8TCY0 68 aa7.44□□□□□ -1.22
TCOF1-204ENST00000427724 ZANQ9Y493 2812 aa7.44□□□□□ -1.22
TCOF1-204ENST00000427724 TMEM256-PLSCR3K7ERE1 68 aa7.43□□□□□ -1.22
TCOF1-204ENST00000427724 NDUFC2O95298 119 aa7.43□□□□□ -1.22
TCOF1-204ENST00000427724 IGLV4-60A0A075B6I1 120 aa7.42□□□□□ -1.22
TCOF1-204ENST00000427724 C4orf26Q17RF5 130 aa7.42□□□□□ -1.22
TCOF1-204ENST00000427724 Q8NAQ8 132 aa7.42□□□□□ -1.22
TCOF1-204ENST00000427724 Q6JHZ5 121 aa7.42□□□□□ -1.22
TCOF1-204ENST00000427724 LINC00846Q9NV44 126 aa7.42□□□□□ -1.22
TCOF1-204ENST00000427724 NIPBLQ6KC79 2804 aaeCLIP7.42□□□□□ -1.223e-7■■■■■ 27.8
TCOF1-204ENST00000427724 RPL37AP8A6NKH3 93 aa7.41□□□□□ -1.22
TCOF1-204ENST00000427724 DIRC1Q969H9 104 aa7.41□□□□□ -1.22
TCOF1-204ENST00000427724 LINC00474Q9P2X8 69 aa7.41□□□□□ -1.22
TCOF1-204ENST00000427724 NBDYA0A0U1RRE5 68 aa7.41□□□□□ -1.22
TCOF1-204ENST00000427724 CELSR1Q9NYQ6 3014 aa7.41□□□□□ -1.22
TCOF1-204ENST00000427724 A0A087WYN8 130 aa7.41□□□□□ -1.22
TCOF1-204ENST00000427724 IBA57-AS1B1ANH7 110 aa7.41□□□□□ -1.22
TCOF1-204ENST00000427724 UNQ6190/PRO20217Q6UXQ8 127 aa7.4□□□□□ -1.23
TCOF1-204ENST00000427724 APCP25054 2843 aa7.39□□□□□ -1.23
TCOF1-204ENST00000427724 CR1P17927 2039 aa7.39□□□□□ -1.23
TCOF1-204ENST00000427724 FAM229AH3BQW9 127 aa7.39□□□□□ -1.23
TCOF1-204ENST00000427724 C11orf72Q8NBR9 251 aa7.39□□□□□ -1.23
TCOF1-204ENST00000427724 CRYGAP11844 174 aa7.38□□□□□ -1.23
TCOF1-204ENST00000427724 SMCR5Q8TEV8 140 aa7.38□□□□□ -1.23
TCOF1-204ENST00000427724 NDUFS5O43920 106 aa7.38□□□□□ -1.23
TCOF1-204ENST00000427724 LINC00588Q9Y4M8 146 aa7.38□□□□□ -1.23
TCOF1-204ENST00000427724 ATP5EP2Q5VTU8 51 aa7.37□□□□□ -1.23
TCOF1-204ENST00000427724 C19orf73Q9NVV2 129 aa7.37□□□□□ -1.23
TCOF1-204ENST00000427724 C6orf99Q4VX62 202 aa7.37□□□□□ -1.23
TCOF1-204ENST00000427724 LINC01556Q5JQF7 62 aa7.37□□□□□ -1.23
TCOF1-204ENST00000427724 NBEAL2Q6ZNJ1 2754 aa7.37□□□□□ -1.23
TCOF1-204ENST00000427724 PLAC8L1A1L4L8 177 aa7.37□□□□□ -1.23
TCOF1-204ENST00000427724 V9GYY9 64 aa7.36□□□□□ -1.23
TCOF1-204ENST00000427724 NDUFC2-KCTD14E9PQ53 114 aa7.36□□□□□ -1.23
TCOF1-204ENST00000427724 FAM218AQ96MZ4 157 aa7.36□□□□□ -1.23
TCOF1-204ENST00000427724 NBPF19A0A087WUL8 3843 aa7.36□□□□□ -1.23
TCOF1-204ENST00000427724 C9orf116Q5BN46 136 aaPredicted RBP7.36□□□□□ -1.23
TCOF1-204ENST00000427724 NTM-AS1Q6ZSK4 140 aa7.36□□□□□ -1.23
TCOF1-204ENST00000427724 EIF4EBP3O60516 100 aaPredicted RBP7.35□□□□□ -1.23
TCOF1-204ENST00000427724 RPL28P46779 137 aaKnown RBP7.35□□□□□ -1.23
TCOF1-204ENST00000427724 EGFEM1PQ0D2K5 195 aa7.35□□□□□ -1.23
TCOF1-204ENST00000427724 C1orf137Q5JT78 98 aa7.35□□□□□ -1.23
TCOF1-204ENST00000427724 COX7BP24311 80 aa7.35□□□□□ -1.23
TCOF1-204ENST00000427724 NREPQ16612 68 aa7.35□□□□□ -1.23
TCOF1-204ENST00000427724 SOSTDC1Q6X4U4 206 aa7.35□□□□□ -1.23
TCOF1-204ENST00000427724 PRR3P79522 188 aaKnown RBP7.34□□□□□ -1.23
TCOF1-204ENST00000427724 TM2D3Q9BRN9 247 aa7.34□□□□□ -1.23
TCOF1-204ENST00000427724 J3QL48 77 aa7.34□□□□□ -1.23
TCOF1-204ENST00000427724 FUSP35637 526 aaKnown RBP eCLIP7.34□□□□□ -1.23
TCOF1-204ENST00000427724 LINC00337Q8N6G1 96 aa7.34□□□□□ -1.23
TCOF1-204ENST00000427724 ZFHX3Q15911 3703 aa7.34□□□□□ -1.23
TCOF1-204ENST00000427724 SMIM26A0A096LP01 95 aa7.33□□□□□ -1.24
TCOF1-204ENST00000427724 CCKP06307 115 aa7.33□□□□□ -1.24
TCOF1-204ENST00000427724 C1orf195Q5TG92 126 aa7.33□□□□□ -1.24
TCOF1-204ENST00000427724 SPINK6Q6UWN8 80 aa7.33□□□□□ -1.24
TCOF1-204ENST00000427724 LITAFQ99732 161 aa7.33□□□□□ -1.24
TCOF1-204ENST00000427724 IGLV5-39A0A0G2JS06 123 aa7.33□□□□□ -1.24
TCOF1-204ENST00000427724 RPS28P62857 69 aaKnown RBP7.33□□□□□ -1.24
TCOF1-204ENST00000427724 SERP1Q9Y6X1 66 aa7.32□□□□□ -1.24
TCOF1-204ENST00000427724 IGLV9-49A0A0B4J1Y8 123 aa7.31□□□□□ -1.24
TCOF1-204ENST00000427724 Q6ZQY7 126 aa7.31□□□□□ -1.24
TCOF1-204ENST00000427724 TRAV7A0A075B6U4 112 aa7.3□□□□□ -1.24
TCOF1-204ENST00000427724 HRNRQ86YZ3 2850 aaPredicted RBP7.29□□□□□ -1.24
TCOF1-204ENST00000427724 NDUFB1O75438 58 aa7.29□□□□□ -1.24
TCOF1-204ENST00000427724 Q8IZM0 81 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms