RNA–Protein interactions for RNA: ENST00000426086.2

VEGFB-202, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VEGFB, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-202ENST00000426086 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
VEGFB-202ENST00000426086 FAM19A2Q8N3H0 131 aa7.75□□□□□ -1.17
VEGFB-202ENST00000426086 TP73-AS1Q9UF72 201 aa7.75□□□□□ -1.17
VEGFB-202ENST00000426086 GAGE10A6NGK3 116 aa7.74□□□□□ -1.17
VEGFB-202ENST00000426086 LEPROTL1O95214 131 aa7.74□□□□□ -1.17
VEGFB-202ENST00000426086 TRAV12-1A0A0B4J245 112 aa7.73□□□□□ -1.17
VEGFB-202ENST00000426086 LINC01547P58512 204 aaPredicted RBP7.73□□□□□ -1.17
VEGFB-202ENST00000426086 HERVK_113P63121 156 aa7.73□□□□□ -1.17
VEGFB-202ENST00000426086 IFI27L1Q96BM0 104 aa7.73□□□□□ -1.17
VEGFB-202ENST00000426086 HSPB8Q9UJY1 196 aa7.73□□□□□ -1.17
VEGFB-202ENST00000426086 TINCRA0A1B0GVN0 87 aa7.72□□□□□ -1.17
VEGFB-202ENST00000426086 NDUFA6P56556 154 aa7.72□□□□□ -1.17
VEGFB-202ENST00000426086 CKS1BP61024 79 aa7.72□□□□□ -1.17
VEGFB-202ENST00000426086 FAM229BQ4G0N7 80 aa7.72□□□□□ -1.17
VEGFB-202ENST00000426086 FSIP2Q5CZC0 6907 aa7.71□□□□□ -1.17
VEGFB-202ENST00000426086 PRSS2P07478 247 aa7.71□□□□□ -1.18
VEGFB-202ENST00000426086 C6orf226Q5I0X4 101 aa7.71□□□□□ -1.18
VEGFB-202ENST00000426086 Q8IZM0 81 aa7.71□□□□□ -1.18
VEGFB-202ENST00000426086 IGLV5-45A0A087WSX0 123 aa7.7□□□□□ -1.18
VEGFB-202ENST00000426086 IGLC3P0DOY3 106 aa7.7□□□□□ -1.18
VEGFB-202ENST00000426086 ASB16-AS1Q495Z4 193 aa7.7□□□□□ -1.18
VEGFB-202ENST00000426086 C3orf22Q8N5N4 141 aa7.7□□□□□ -1.18
VEGFB-202ENST00000426086 IGKV2D-26A0A0A0MRZ7 120 aa7.69□□□□□ -1.18
VEGFB-202ENST00000426086 UBE2AP49459 152 aa7.69□□□□□ -1.18
VEGFB-202ENST00000426086 GEMIN7Q9H840 131 aaKnown RBP7.69□□□□□ -1.18
VEGFB-202ENST00000426086 TMA7Q9Y2S6 64 aaKnown RBP7.69□□□□□ -1.18
VEGFB-202ENST00000426086 FABP4P15090 132 aa7.68□□□□□ -1.18
VEGFB-202ENST00000426086 PRLHP81277 87 aa7.68□□□□□ -1.18
VEGFB-202ENST00000426086 KRTAP13-3Q3SY46 172 aa7.68□□□□□ -1.18
VEGFB-202ENST00000426086 CHTOPQ9Y3Y2 248 aaKnown RBP7.68□□□□□ -1.18
VEGFB-202ENST00000426086 F8VRH5 84 aa7.67□□□□□ -1.18
VEGFB-202ENST00000426086 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
VEGFB-202ENST00000426086 MAP1LC3CQ9BXW4 147 aa7.67□□□□□ -1.18
VEGFB-202ENST00000426086 CDKN2A-AS1Q9UH64 79 aa7.67□□□□□ -1.18
VEGFB-202ENST00000426086 IGLV5-37A0A075B6J1 123 aa7.65□□□□□ -1.18
VEGFB-202ENST00000426086 IGKV2-28A0A075B6P5 120 aa7.65□□□□□ -1.18
VEGFB-202ENST00000426086 C5orf52A6NGY3 159 aa7.65□□□□□ -1.18
VEGFB-202ENST00000426086 H3BRM9 83 aa7.65□□□□□ -1.18
VEGFB-202ENST00000426086 IGKV2D-28P01615 120 aa7.65□□□□□ -1.18
VEGFB-202ENST00000426086 HIST3H2BBQ8N257 126 aa7.65□□□□□ -1.18
VEGFB-202ENST00000426086 SYS1-DBNDD2H3BUS1 97 aa7.64□□□□□ -1.19
VEGFB-202ENST00000426086 PET117Q6UWS5 81 aa7.64□□□□□ -1.19
VEGFB-202ENST00000426086 C11orf86A6NJI1 115 aa7.63□□□□□ -1.19
VEGFB-202ENST00000426086 ZNF22P17026 224 aaPredicted RBP7.63□□□□□ -1.19
VEGFB-202ENST00000426086 IGLV5-39A0A0G2JS06 123 aa7.62□□□□□ -1.19
VEGFB-202ENST00000426086 SMIM1B2RUZ4 78 aa7.62□□□□□ -1.19
VEGFB-202ENST00000426086 TMEM238C9JI98 176 aa7.62□□□□□ -1.19
VEGFB-202ENST00000426086 PLNP26678 52 aa7.62□□□□□ -1.19
VEGFB-202ENST00000426086 SNRPEP62304 92 aaKnown RBP7.62□□□□□ -1.19
VEGFB-202ENST00000426086 LINC00337Q8N6G1 96 aa7.62□□□□□ -1.19
VEGFB-202ENST00000426086 PLEKHB2Q96CS7 222 aa7.62□□□□□ -1.19
VEGFB-202ENST00000426086 DPM2O94777 84 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 C3orf79P0CE67 100 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 S100A2P29034 98 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 AKR1D1P51857 326 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 KRTAP19-2Q3LHN2 52 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 LINC01545Q5VT33 79 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 FP248Q71RG6 208 aaPredicted RBP7.61□□□□□ -1.19
VEGFB-202ENST00000426086 FAM19A1Q7Z5A9 133 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 NKAPP1Q8N9T2 125 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 HIST1H2BLQ99880 126 aa7.61□□□□□ -1.19
VEGFB-202ENST00000426086 CXCL5P42830 114 aa7.6□□□□□ -1.19
VEGFB-202ENST00000426086 TMEM170BQ5T4T1 132 aa7.6□□□□□ -1.19
VEGFB-202ENST00000426086 TMEM126AQ9H061 195 aa7.6□□□□□ -1.19
VEGFB-202ENST00000426086 TMEM223A0PJW6 202 aa7.59□□□□□ -1.19
VEGFB-202ENST00000426086 IGKCP01834 107 aa7.59□□□□□ -1.19
VEGFB-202ENST00000426086 H0Y8G0 127 aa7.58□□□□□ -1.2
VEGFB-202ENST00000426086 M0R378 163 aa7.58□□□□□ -1.2
VEGFB-202ENST00000426086 SPINK8P0C7L1 97 aa7.58□□□□□ -1.2
VEGFB-202ENST00000426086 DAND5Q8N907 189 aa7.58□□□□□ -1.2
VEGFB-202ENST00000426086 Q8NDZ9 215 aa7.58□□□□□ -1.2
VEGFB-202ENST00000426086 COX7B2Q8TF08 81 aa7.58□□□□□ -1.2
VEGFB-202ENST00000426086 VPREB1P12018 145 aa7.57□□□□□ -1.2
VEGFB-202ENST00000426086 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
VEGFB-202ENST00000426086 KRTDAPP60985 99 aa7.57□□□□□ -1.2
VEGFB-202ENST00000426086 MT1HP80294 61 aa7.57□□□□□ -1.2
VEGFB-202ENST00000426086 SPAG11AQ6PDA7 123 aa7.57□□□□□ -1.2
VEGFB-202ENST00000426086 SFTA2Q6UW10 78 aa7.57□□□□□ -1.2
VEGFB-202ENST00000426086 C20orf202A1L168 122 aa7.56□□□□□ -1.2
VEGFB-202ENST00000426086 LINC00518Q8N0U6 118 aa7.56□□□□□ -1.2
VEGFB-202ENST00000426086 SPRR4Q96PI1 79 aa7.55□□□□□ -1.2
VEGFB-202ENST00000426086 HIGD2AQ9BW72 106 aa7.55□□□□□ -1.2
VEGFB-202ENST00000426086 HERVK_113P61574 105 aa7.54□□□□□ -1.2
VEGFB-202ENST00000426086 Q8NBF4 154 aa7.54□□□□□ -1.2
VEGFB-202ENST00000426086 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
VEGFB-202ENST00000426086 LEPROTO15243 131 aa7.53□□□□□ -1.2
VEGFB-202ENST00000426086 E9PLD3 99 aa7.52□□□□□ -1.21
VEGFB-202ENST00000426086 PFN2P35080 140 aa7.52□□□□□ -1.21
VEGFB-202ENST00000426086 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
VEGFB-202ENST00000426086 HERV-K104P63124 156 aa7.51□□□□□ -1.21
VEGFB-202ENST00000426086 COX17Q14061 63 aa7.51□□□□□ -1.21
VEGFB-202ENST00000426086 C4orf48Q5BLP8 95 aa7.51□□□□□ -1.21
VEGFB-202ENST00000426086 SND1-IT1Q9HBX3 110 aa7.51□□□□□ -1.21
VEGFB-202ENST00000426086 LINC00587B1AMM8 73 aa7.5□□□□□ -1.21
VEGFB-202ENST00000426086 J3QQQ9 107 aa7.5□□□□□ -1.21
VEGFB-202ENST00000426086 LORP23490 312 aaPredicted RBP7.5□□□□□ -1.21
VEGFB-202ENST00000426086 NMUP48645 174 aa7.5□□□□□ -1.21
VEGFB-202ENST00000426086 XP32Q5T750 250 aa7.5□□□□□ -1.21
VEGFB-202ENST00000426086 MYMXA0A1B0GTQ4 84 aa7.49□□□□□ -1.21
VEGFB-202ENST00000426086 NDUFA12Q9UI09 145 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms