RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 MRPL33O75394 65 aaKnown RBP1.68□□□□□ -2.14
LINC01040-201ENST00000425048 APELAP0DMC3 54 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 PDE6GP18545 87 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 CCL18P55774 89 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 HAMPP81172 84 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 COX6A2Q02221 97 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 ASB16-AS1Q495Z4 193 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 C9orf116Q5BN46 136 aaPredicted RBP1.68□□□□□ -2.14
LINC01040-201ENST00000425048 SCXQ7RTU7 201 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 ADM2Q7Z4H4 148 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 Q8N814 137 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 GAFA1Q96PS6 74 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 Q9BRP9 147 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 ASXL3Q9C0F0 2248 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 CHD8Q9HCK8 2581 aa1.68□□□□□ -2.14
LINC01040-201ENST00000425048 A6NED7 52 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 C19orf84I3L1E1 186 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 IGLV1-51P01701 117 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 ELOF1P60002 83 aaKnown RBP1.67□□□□□ -2.14
LINC01040-201ENST00000425048 PRR3P79522 188 aaKnown RBP1.67□□□□□ -2.14
LINC01040-201ENST00000425048 DEFB114Q30KQ6 69 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 NTM-AS1Q6ZSK4 140 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 CHCHD7Q9BUK0 85 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 SND1-IT1Q9HBX3 110 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 KLK9Q9UKQ9 250 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 S4R3C0 116 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 PLCE1Q9P212 2302 aa1.67□□□□□ -2.14
LINC01040-201ENST00000425048 DOPEY2Q9Y3R5 2298 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 MED13LQ71F56 2210 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 IGHV3-49A0A0A0MS15 119 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 IGHV3OR16-9A0A0B4J2B5 98 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 IGHV1-3A0A0C4DH29 117 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 SPTY2D1-AS1A0A0U1RR47 76 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 TRBV6-4A0A1B0GX49 114 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 IGHV3-53P01767 116 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 PRM2P04554 102 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 CCL3L1P16619 93 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 S100A4P26447 101 aaKnown RBP1.66□□□□□ -2.14
LINC01040-201ENST00000425048 KLK9Q2XQG4 91 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 C6orf99Q4VX62 202 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 C11orf71Q6IPW1 123 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 MUC7Q8TAX7 377 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 ALMS1Q8TCU4 4167 aa1.66□□□□□ -2.14
LINC01040-201ENST00000425048 ZFHX4Q86UP3 3567 aa1.65□□□□□ -2.14
LINC01040-201ENST00000425048 COL6A3P12111 3177 aa1.65□□□□□ -2.14
LINC01040-201ENST00000425048 IGHV6-1A0A0B4J1U7 121 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 IGHV3-72A0A0B4J1Y9 119 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 A0A1W2PNM2 257 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 PRB1P04280 392 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 SPANXA2-OT1Q8N9U9 137 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 Q8NAQ8 132 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 B9D2Q9BPU9 175 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 LINC00467Q9BRT7 94 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 ZNF706Q9Y5V0 76 aaPredicted RBP1.65□□□□□ -2.15
LINC01040-201ENST00000425048 LINC01558Q9Y6Z2 57 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 TENM1Q9UKZ4 2725 aa1.65□□□□□ -2.15
LINC01040-201ENST00000425048 IGHV3OR16-8A0A075B7F1 116 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 IGHV3-73A0A0B4J1V6 119 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 IGHV3-66A0A0C4DH42 116 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 NDUFA4O00483 81 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 SPINK7P58062 85 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 DEFB1P60022 68 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 CNBPP62633 177 aaKnown RBP1.64□□□□□ -2.15
LINC01040-201ENST00000425048 PRB3Q04118 309 aaPredicted RBP1.64□□□□□ -2.15
LINC01040-201ENST00000425048 FBXL19-AS1Q494R0 122 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 LINC00575Q6W349 94 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 CASC2Q6XLA1 102 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 ST20-AS1Q8NBB2 130 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 COX7B2Q8TF08 81 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 LINC00208Q96KT6 92 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 RNF5Q99942 180 aa1.64□□□□□ -2.15
LINC01040-201ENST00000425048 TRGV2A0A075B6R0 118 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 ETDCA0A1B0GVM5 59 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 NDUFB1O75438 58 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 CCL5P13501 91 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 BSPH1Q075Z2 132 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 FAM74A4Q5TZK3 123 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 DEFB108BQ8NET1 73 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 RETNLBQ9BQ08 111 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 TTTY12Q9BZ98 90 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 KCNQ1DNQ9H478 68 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 TECTAO75443 2155 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 ICE1Q9Y2F5 2266 aa1.63□□□□□ -2.15
LINC01040-201ENST00000425048 CENPFP49454 3210 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 IGHV3-74A0A0B4J1X5 117 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 LINC00959A0A1B0GUT2 108 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 ODF3BA8MYP8 253 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 H3BQ85 93 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 TLX1NBP0CAT3 122 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 IGHV1-8P0DP01 117 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 COX7BP24311 80 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 LINC00158P58513 81 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 DEFB103AP81534 67 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.62□□□□□ -2.15
LINC01040-201ENST00000425048 COA5Q86WW8 74 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 C9orf163Q8N9P6 203 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 CHD6Q8TD26 2715 aa1.62□□□□□ -2.15
LINC01040-201ENST00000425048 TNRC18O15417 2968 aaPredicted RBP1.62□□□□□ -2.15
LINC01040-201ENST00000425048 ABCA4P78363 2273 aa1.61□□□□□ -2.15
LINC01040-201ENST00000425048 IGHV1-46P01743 117 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms