RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 HIST1H2BNQ99877 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 HIST1H2BMQ99879 126 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 SND1-IT1Q9HBX3 110 aa8.98□□□□□ -0.97
FAM3A-209ENST00000421517 MAP1LC3CQ9BXW4 147 aa8.97□□□□□ -0.97
FAM3A-209ENST00000421517 BCE1O60756 84 aa8.96□□□□□ -0.98
FAM3A-209ENST00000421517 DPM2O94777 84 aa8.96□□□□□ -0.98
FAM3A-209ENST00000421517 VPREB1P12018 145 aa8.96□□□□□ -0.98
FAM3A-209ENST00000421517 IGLV1-50A0A075B6I6 118 aa8.95□□□□□ -0.98
FAM3A-209ENST00000421517 MYMXA0A1B0GTQ4 84 aa8.95□□□□□ -0.98
FAM3A-209ENST00000421517 LEPROTO15243 131 aa8.95□□□□□ -0.98
FAM3A-209ENST00000421517 NMUP48645 174 aa8.95□□□□□ -0.98
FAM3A-209ENST00000421517 COA6Q5JTJ3 125 aaKnown RBP8.95□□□□□ -0.98
FAM3A-209ENST00000421517 PLEKHB2Q96CS7 222 aa8.95□□□□□ -0.98
FAM3A-209ENST00000421517 IGKCP01834 107 aa8.94□□□□□ -0.98
FAM3A-209ENST00000421517 RPL28P46779 137 aaKnown RBP8.94□□□□□ -0.98
FAM3A-209ENST00000421517 HERVK_113P61574 105 aa8.94□□□□□ -0.98
FAM3A-209ENST00000421517 NDUFA12Q9UI09 145 aa8.94□□□□□ -0.98
FAM3A-209ENST00000421517 FABP4P15090 132 aa8.93□□□□□ -0.98
FAM3A-209ENST00000421517 LINC00158P58513 81 aa8.93□□□□□ -0.98
FAM3A-209ENST00000421517 LOC107984156A0A0G2JMH3 177 aa8.92□□□□□ -0.98
FAM3A-209ENST00000421517 KRTAP1-4P0C5Y4 121 aa8.92□□□□□ -0.98
FAM3A-209ENST00000421517 ARL17AQ8IVW1 177 aa8.92□□□□□ -0.98
FAM3A-209ENST00000421517 IGKV2D-26A0A0A0MRZ7 120 aa8.91□□□□□ -0.98
FAM3A-209ENST00000421517 H0Y8G0 127 aa8.91□□□□□ -0.98
FAM3A-209ENST00000421517 RPL37AP8A6NKH3 93 aa8.9□□□□□ -0.98
FAM3A-209ENST00000421517 SYS1-DBNDD2H3BUS1 97 aa8.9□□□□□ -0.98
FAM3A-209ENST00000421517 J3QQQ9 107 aa8.9□□□□□ -0.98
FAM3A-209ENST00000421517 RPL13AP40429 203 aaKnown RBP8.9□□□□□ -0.98
FAM3A-209ENST00000421517 MEIG1Q5JSS6 88 aa8.9□□□□□ -0.98
FAM3A-209ENST00000421517 PET117Q6UWS5 81 aa8.9□□□□□ -0.98
FAM3A-209ENST00000421517 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.98
FAM3A-209ENST00000421517 E9PLD3 99 aa8.88□□□□□ -0.99
FAM3A-209ENST00000421517 M0R378 163 aa8.88□□□□□ -0.99
FAM3A-209ENST00000421517 SMIM13P0DJ93 91 aa8.88□□□□□ -0.99
FAM3A-209ENST00000421517 LINC01545Q5VT33 79 aa8.88□□□□□ -0.99
FAM3A-209ENST00000421517 MIR7-3HGQ8N6C7 128 aa8.88□□□□□ -0.99
FAM3A-209ENST00000421517 GAGE10A6NGK3 116 aa8.87□□□□□ -0.99
FAM3A-209ENST00000421517 IGKV2-28A0A075B6P5 120 aa8.86□□□□□ -0.99
FAM3A-209ENST00000421517 IGKV2D-28P01615 120 aa8.86□□□□□ -0.99
FAM3A-209ENST00000421517 LGALS3P17931 250 aaKnown RBP8.86□□□□□ -0.99
FAM3A-209ENST00000421517 AKR1D1P51857 326 aa8.86□□□□□ -0.99
FAM3A-209ENST00000421517 TSPEAR-AS2P59090 65 aa8.86□□□□□ -0.99
FAM3A-209ENST00000421517 Q8NDZ9 215 aa8.86□□□□□ -0.99
FAM3A-209ENST00000421517 TMEM126AQ9H061 195 aa8.86□□□□□ -0.99
FAM3A-209ENST00000421517 PRR26Q8N8Z3 221 aa8.85□□□□□ -0.99
FAM3A-209ENST00000421517 TRBV10-2A0A0K0K1G8 114 aa8.84□□□□□ -0.99
FAM3A-209ENST00000421517 UBE2AP49459 152 aa8.84□□□□□ -0.99
FAM3A-209ENST00000421517 BOD1L2Q8IYS8 172 aa8.84□□□□□ -0.99
FAM3A-209ENST00000421517 PMCHL2Q9BQD1 86 aa8.84□□□□□ -0.99
FAM3A-209ENST00000421517 A0A0U1RRA0 63 aa8.83□□□□□ -1
FAM3A-209ENST00000421517 NDUFC2O95298 119 aa8.83□□□□□ -1
FAM3A-209ENST00000421517 PRYO14603 147 aa8.82□□□□□ -1
FAM3A-209ENST00000421517 FAM229BQ4G0N7 80 aa8.82□□□□□ -1
FAM3A-209ENST00000421517 KCNQ1DNQ9H478 68 aa8.82□□□□□ -1
FAM3A-209ENST00000421517 TMA7Q9Y2S6 64 aaKnown RBP8.82□□□□□ -1
FAM3A-209ENST00000421517 C3orf79P0CE67 100 aa8.81□□□□□ -1
FAM3A-209ENST00000421517 SPRR1AP35321 89 aa8.81□□□□□ -1
FAM3A-209ENST00000421517 LINC00337Q8N6G1 96 aa8.81□□□□□ -1
FAM3A-209ENST00000421517 TIMM17BO60830 172 aa8.8□□□□□ -1
FAM3A-209ENST00000421517 CRYGAP11844 174 aa8.8□□□□□ -1
FAM3A-209ENST00000421517 CTAG1AP78358 180 aa8.8□□□□□ -1
FAM3A-209ENST00000421517 S100A12P80511 92 aa8.8□□□□□ -1
FAM3A-209ENST00000421517 FAM19A1Q7Z5A9 133 aa8.8□□□□□ -1
FAM3A-209ENST00000421517 MIEN1Q9BRT3 115 aa8.8□□□□□ -1
FAM3A-209ENST00000421517 A0A0J9YXY3 114 aa8.79□□□□□ -1
FAM3A-209ENST00000421517 TMEM238C9JI98 176 aa8.79□□□□□ -1
FAM3A-209ENST00000421517 S100A6P06703 90 aa8.79□□□□□ -1
FAM3A-209ENST00000421517 C20orf202A1L168 122 aa8.78□□□□□ -1
FAM3A-209ENST00000421517 SPANXB1Q9NS25 103 aaPredicted RBP8.78□□□□□ -1
FAM3A-209ENST00000421517 KRTAP4-16G5E9R7 235 aaPredicted RBP8.77□□□□□ -1.01
FAM3A-209ENST00000421517 CBY1Q9Y3M2 126 aa8.77□□□□□ -1.01
FAM3A-209ENST00000421517 PRLHP81277 87 aa8.76□□□□□ -1.01
FAM3A-209ENST00000421517 PPDPFQ9H3Y8 114 aa8.76□□□□□ -1.01
FAM3A-209ENST00000421517 KRTDAPP60985 99 aa8.75□□□□□ -1.01
FAM3A-209ENST00000421517 SNRPEP62304 92 aaKnown RBP8.75□□□□□ -1.01
FAM3A-209ENST00000421517 A0A087X002 238 aa8.74□□□□□ -1.01
FAM3A-209ENST00000421517 TRBV10-3A0A0K0K1G6 114 aa8.74□□□□□ -1.01
FAM3A-209ENST00000421517 NCR3O14931 201 aa8.74□□□□□ -1.01
FAM3A-209ENST00000421517 IGLV6-57P01721 117 aa8.74□□□□□ -1.01
FAM3A-209ENST00000421517 ADAMTSL4-AS1Q5T5F5 129 aa8.74□□□□□ -1.01
FAM3A-209ENST00000421517 DAND5Q8N907 189 aa8.74□□□□□ -1.01
FAM3A-209ENST00000421517 LITAFQ99732 161 aa8.74□□□□□ -1.01
FAM3A-209ENST00000421517 ZNF706Q9Y5V0 76 aaPredicted RBP8.74□□□□□ -1.01
FAM3A-209ENST00000421517 DDTP30046 118 aa8.73□□□□□ -1.01
FAM3A-209ENST00000421517 TYMSOSQ8TAI1 123 aa8.72□□□□□ -1.01
FAM3A-209ENST00000421517 SPANXCQ9NY87 97 aa8.72□□□□□ -1.01
FAM3A-209ENST00000421517 UBR4Q5T4S7 5183 aa8.72□□□□□ -1.01
FAM3A-209ENST00000421517 ETDCA0A1B0GVM5 59 aa8.71□□□□□ -1.02
FAM3A-209ENST00000421517 ZNF815PA8K554 130 aa8.71□□□□□ -1.02
FAM3A-209ENST00000421517 SOSTDC1Q6X4U4 206 aa8.71□□□□□ -1.02
FAM3A-209ENST00000421517 Q6ZVH6 145 aa8.71□□□□□ -1.02
FAM3A-209ENST00000421517 LRP2P98164 4655 aa8.7□□□□□ -1.02
FAM3A-209ENST00000421517 S100A7L2Q5SY68 101 aa8.7□□□□□ -1.02
FAM3A-209ENST00000421517 HIST3H2BBQ8N257 126 aa8.7□□□□□ -1.02
FAM3A-209ENST00000421517 LINC00308Q8TCZ7 52 aa8.7□□□□□ -1.02
FAM3A-209ENST00000421517 COPS9Q8WXC6 57 aa8.7□□□□□ -1.02
FAM3A-209ENST00000421517 HIGD2AQ9BW72 106 aa8.7□□□□□ -1.02
FAM3A-209ENST00000421517 B5MCH6 92 aa8.69□□□□□ -1.02
FAM3A-209ENST00000421517 KRTAP13-2Q52LG2 175 aa8.69□□□□□ -1.02
FAM3A-209ENST00000421517 LINC00518Q8N0U6 118 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms